RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 CSNK1G1Q9HCP0 422 aa21.58■■□□□ 1.05
PNKP-211ENST00000598020 RTN4Q9NQC3 1192 aaKnown RBP21.58■■□□□ 1.05
PNKP-211ENST00000598020 HCFC1R1Q9NWW0 138 aa21.58■■□□□ 1.05
PNKP-211ENST00000598020 SIK3Q9Y2K2 1263 aa21.58■■□□□ 1.05
PNKP-211ENST00000598020 CSH1P0DML2 217 aa21.57■■□□□ 1.04
PNKP-211ENST00000598020 CSH2P0DML3 217 aa21.57■■□□□ 1.04
PNKP-211ENST00000598020 VDRP11473 427 aa21.57■■□□□ 1.04
PNKP-211ENST00000598020 CCDC130P13994 396 aa21.57■■□□□ 1.04
PNKP-211ENST00000598020 GRIK1P39086 918 aa21.57■■□□□ 1.04
PNKP-211ENST00000598020 GPR15P49685 360 aa21.57■■□□□ 1.04
PNKP-211ENST00000598020 UBXN1Q04323 297 aa21.57■■□□□ 1.04
PNKP-211ENST00000598020 FILIP1LQ4L180 1135 aa21.57■■□□□ 1.04
PNKP-211ENST00000598020 ADHFE1Q8IWW8 467 aa21.57■■□□□ 1.04
PNKP-211ENST00000598020 CORO1BQ9BR76 489 aa21.57■■□□□ 1.04
PNKP-211ENST00000598020 MED10Q9BTT4 135 aa21.57■■□□□ 1.04
PNKP-211ENST00000598020 NAA15Q9BXJ9 866 aaKnown RBP21.57■■□□□ 1.04
PNKP-211ENST00000598020 ASAH2Q9NR71 780 aa21.57■■□□□ 1.04
PNKP-211ENST00000598020 FAM49BQ9NUQ9 324 aa21.57■■□□□ 1.04
PNKP-211ENST00000598020 TMEM30AQ9NV96 361 aa21.57■■□□□ 1.04
PNKP-211ENST00000598020 DNAJC12Q9UKB3 198 aa21.57■■□□□ 1.04
PNKP-211ENST00000598020 DOCK8Q8NF50 2099 aa21.57■■□□□ 1.04
PNKP-211ENST00000598020 GREB1Q4ZG55 1949 aa21.57■■□□□ 1.04
PNKP-211ENST00000598020 NCOR1O75376 2440 aa21.56■■□□□ 1.04
PNKP-211ENST00000598020 A0A1B0GTH6 734 aa21.56■■□□□ 1.04
PNKP-211ENST00000598020 RNF225M0QZC1 329 aaPredicted RBP21.56■■□□□ 1.04
PNKP-211ENST00000598020 ZNF197O14709 1029 aa21.56■■□□□ 1.04
PNKP-211ENST00000598020 NOL4O94818 638 aa21.56■■□□□ 1.04
PNKP-211ENST00000598020 UCHL3P15374 230 aa21.56■■□□□ 1.04
PNKP-211ENST00000598020 HMGA1P17096 107 aaKnown RBP21.56■■□□□ 1.04
PNKP-211ENST00000598020 FSHRP23945 695 aa21.56■■□□□ 1.04
PNKP-211ENST00000598020 CACNA2D1P54289 1103 aa21.56■■□□□ 1.04
PNKP-211ENST00000598020 NTHL1P78549 312 aa21.56■■□□□ 1.04
PNKP-211ENST00000598020 ZP2Q05996 745 aa21.56■■□□□ 1.04
PNKP-211ENST00000598020 PRSS36Q5K4E3 855 aa21.56■■□□□ 1.04
PNKP-211ENST00000598020 PPP1R26Q5T8A7 1209 aaPredicted RBP21.56■■□□□ 1.04
PNKP-211ENST00000598020 CYP4A22Q5TCH4 519 aa21.56■■□□□ 1.04
PNKP-211ENST00000598020 TMC8Q8IU68 726 aa21.56■■□□□ 1.04
PNKP-211ENST00000598020 SCN4BQ8IWT1 228 aa21.56■■□□□ 1.04
PNKP-211ENST00000598020 RBBP8NLQ8NC74 664 aaPredicted RBP21.56■■□□□ 1.04
PNKP-211ENST00000598020 GIPC2Q8TF65 315 aa21.56■■□□□ 1.04
PNKP-211ENST00000598020 TRMT2BQ96GJ1 504 aaKnown RBP21.56■■□□□ 1.04
PNKP-211ENST00000598020 MYRFLQ96LU7 910 aa21.56■■□□□ 1.04
PNKP-211ENST00000598020 LSM14BQ9BX40 385 aaKnown RBP21.56■■□□□ 1.04
PNKP-211ENST00000598020 DMAP1Q9NPF5 467 aaPredicted RBP21.56■■□□□ 1.04
PNKP-211ENST00000598020 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.56■■□□□ 1.04
PNKP-211ENST00000598020 C19orf67A6NJJ6 358 aa21.55■■□□□ 1.04
PNKP-211ENST00000598020 LOC730098B7Z3J9 87 aa21.55■■□□□ 1.04
PNKP-211ENST00000598020 F8VP50 259 aa21.55■■□□□ 1.04
PNKP-211ENST00000598020 AP1G2O75843 785 aa21.55■■□□□ 1.04
PNKP-211ENST00000598020 FGF19O95750 216 aa21.55■■□□□ 1.04
PNKP-211ENST00000598020 ANXA13P27216 316 aa21.55■■□□□ 1.04
PNKP-211ENST00000598020 SYCP1Q15431 976 aa21.55■■□□□ 1.04
PNKP-211ENST00000598020 SGO2Q562F6 1265 aa21.55■■□□□ 1.04
PNKP-211ENST00000598020 SDHAF4Q5VUM1 108 aa21.55■■□□□ 1.04
PNKP-211ENST00000598020 OTOP3Q7RTS5 596 aa21.55■■□□□ 1.04
PNKP-211ENST00000598020 HS6ST3Q8IZP7 471 aa21.55■■□□□ 1.04
PNKP-211ENST00000598020 SMOQ99835 787 aa21.55■■□□□ 1.04
PNKP-211ENST00000598020 GANQ9H2C0 597 aa21.55■■□□□ 1.04
PNKP-211ENST00000598020 KRT82Q9NSB4 513 aa21.55■■□□□ 1.04
PNKP-211ENST00000598020 AJAP1Q9UKB5 411 aaPredicted RBP21.55■■□□□ 1.04
PNKP-211ENST00000598020 NR2E1Q9Y466 385 aa21.55■■□□□ 1.04
PNKP-211ENST00000598020 ZFP37Q9Y6Q3 630 aaPredicted RBP21.55■■□□□ 1.04
PNKP-211ENST00000598020 MYH10P35580 1976 aa21.55■■□□□ 1.04
PNKP-211ENST00000598020 SLC38A8A6NNN8 435 aa21.54■■□□□ 1.04
PNKP-211ENST00000598020 FAM200BP0CF97 657 aa21.54■■□□□ 1.04
PNKP-211ENST00000598020 FANCCQ00597 558 aa21.54■■□□□ 1.04
PNKP-211ENST00000598020 NR1I3Q14994 352 aa21.54■■□□□ 1.04
PNKP-211ENST00000598020 STILQ15468 1287 aa21.54■■□□□ 1.04
PNKP-211ENST00000598020 ARHGAP44Q17R89 818 aa21.54■■□□□ 1.04
PNKP-211ENST00000598020 SLC5A9Q2M3M2 681 aa21.54■■□□□ 1.04
PNKP-211ENST00000598020 PDZD4Q76G19 769 aaPredicted RBP21.54■■□□□ 1.04
PNKP-211ENST00000598020 ANKRD52Q8NB46 1076 aa21.54■■□□□ 1.04
PNKP-211ENST00000598020 ZMIZ2Q8NF64 920 aa21.54■■□□□ 1.04
PNKP-211ENST00000598020 GPR152Q8TDT2 470 aa21.54■■□□□ 1.04
PNKP-211ENST00000598020 KCNK16Q96T55 309 aa21.54■■□□□ 1.04
PNKP-211ENST00000598020 DUSP16Q9BY84 665 aa21.54■■□□□ 1.04
PNKP-211ENST00000598020 IL21Q9HBE4 155 aa21.54■■□□□ 1.04
PNKP-211ENST00000598020 PNPLA8Q9NP80 782 aa21.54■■□□□ 1.04
PNKP-211ENST00000598020 EHD2Q9NZN4 543 aa21.54■■□□□ 1.04
PNKP-211ENST00000598020 UXTQ9UBK9 157 aaPredicted RBP21.54■■□□□ 1.04
PNKP-211ENST00000598020 MRPS23Q9Y3D9 190 aaKnown RBP21.54■■□□□ 1.04
PNKP-211ENST00000598020 FHOD1Q9Y613 1164 aa21.54■■□□□ 1.04
PNKP-211ENST00000598020 A0A1W2PQC6 194 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 O00370 1275 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 TEX33O43247 280 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 MOSPD3O75425 235 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 SERPINC1P01008 464 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 KRT5P13647 590 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 NPR3P17342 541 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 ADORA2BP29275 332 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 CCR2P41597 374 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 KLK7P49862 253 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 CNGA2Q16280 664 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 TAF12Q16514 161 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 LCLAT1Q6UWP7 414 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 CLEC20AQ6ZU45 233 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 DENND5BQ6ZUT9 1274 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 ITFG1Q8TB96 612 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 TFAP2BQ92481 460 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 ACSF2Q96CM8 615 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms