RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 TMEM30AQ9NV96 361 aa22.45■■□□□ 1.18
PNKP-209ENST00000596726 UXTQ9UBK9 157 aaPredicted RBP22.45■■□□□ 1.18
PNKP-209ENST00000596726 HMGXB4Q9UGU5 601 aa22.45■■□□□ 1.18
PNKP-209ENST00000596726 FBXL21Q9UKT6 434 aa22.45■■□□□ 1.18
PNKP-209ENST00000596726 MAGED2Q9UNF1 606 aaPredicted RBP22.45■■□□□ 1.18
PNKP-209ENST00000596726 KRBA1A5PL33 1030 aa22.44■■□□□ 1.18
PNKP-209ENST00000596726 CLDN5O00501 218 aa22.44■■□□□ 1.18
PNKP-209ENST00000596726 NCANO14594 1321 aa22.44■■□□□ 1.18
PNKP-209ENST00000596726 TRIM66O15016 1216 aa22.44■■□□□ 1.18
PNKP-209ENST00000596726 MYH10P35580 1976 aa22.44■■□□□ 1.18
PNKP-209ENST00000596726 GRIK1P39086 918 aa22.44■■□□□ 1.18
PNKP-209ENST00000596726 CACNA2D1P54289 1103 aa22.44■■□□□ 1.18
PNKP-209ENST00000596726 VITQ6UXI7 678 aa22.44■■□□□ 1.18
PNKP-209ENST00000596726 ACOT1Q86TX2 421 aa22.44■■□□□ 1.18
PNKP-209ENST00000596726 GCNAQ96QF7 691 aa22.44■■□□□ 1.18
PNKP-209ENST00000596726 ZMYM5Q9UJ78 669 aa22.44■■□□□ 1.18
PNKP-209ENST00000596726 PMM2O15305 246 aa22.43■■□□□ 1.18
PNKP-209ENST00000596726 TADA3O75528 432 aa22.43■■□□□ 1.18
PNKP-209ENST00000596726 NPR3P17342 541 aa22.43■■□□□ 1.18
PNKP-209ENST00000596726 VIPR2P41587 438 aa22.43■■□□□ 1.18
PNKP-209ENST00000596726 MARSP56192 900 aaKnown RBP22.43■■□□□ 1.18
PNKP-209ENST00000596726 CCDC40Q4G0X9 1142 aa22.43■■□□□ 1.18
PNKP-209ENST00000596726 ARID3BQ8IVW6 561 aaPredicted RBP22.43■■□□□ 1.18
PNKP-209ENST00000596726 SUGP1Q8IWZ8 645 aaKnown RBP22.43■■□□□ 1.18
PNKP-209ENST00000596726 SIX5Q8N196 739 aa22.43■■□□□ 1.18
PNKP-209ENST00000596726 MLKLQ8NB16 471 aa22.43■■□□□ 1.18
PNKP-209ENST00000596726 TATDN2Q93075 761 aa22.43■■□□□ 1.18
PNKP-209ENST00000596726 E2F7Q96AV8 911 aa22.43■■□□□ 1.18
PNKP-209ENST00000596726 RSPRY1Q96DX4 576 aa22.43■■□□□ 1.18
PNKP-209ENST00000596726 MED15Q96RN5 788 aa22.43■■□□□ 1.18
PNKP-209ENST00000596726 SRRTQ9BXP5 876 aaKnown RBP22.43■■□□□ 1.18
PNKP-209ENST00000596726 SLC46A2Q9BY10 475 aa22.43■■□□□ 1.18
PNKP-209ENST00000596726 NUP62CLQ9H1M0 184 aa22.43■■□□□ 1.18
PNKP-209ENST00000596726 RAPGEFL1Q9UHV5 662 aa22.43■■□□□ 1.18
PNKP-209ENST00000596726 RWDD2AQ9UIY3 292 aa22.43■■□□□ 1.18
PNKP-209ENST00000596726 SOBPA7XYQ1 873 aa22.42■■□□□ 1.18
PNKP-209ENST00000596726 F8VP50 259 aa22.42■■□□□ 1.18
PNKP-209ENST00000596726 GNA14O95837 355 aa22.42■■□□□ 1.18
PNKP-209ENST00000596726 DDX6P26196 483 aaKnown RBP eCLIP22.42■■□□□ 1.18
PNKP-209ENST00000596726 ANXA13P27216 316 aa22.42■■□□□ 1.18
PNKP-209ENST00000596726 FMO5P49326 533 aa22.42■■□□□ 1.18
PNKP-209ENST00000596726 DENND5BQ6ZUT9 1274 aa22.42■■□□□ 1.18
PNKP-209ENST00000596726 FAM35AQ86V20 835 aa22.42■■□□□ 1.18
PNKP-209ENST00000596726 MFSD6LQ8IWD5 586 aa22.42■■□□□ 1.18
PNKP-209ENST00000596726 FUKQ8N0W3 1084 aa22.42■■□□□ 1.18
PNKP-209ENST00000596726 WHAMMQ8TF30 809 aa22.42■■□□□ 1.18
PNKP-209ENST00000596726 DEPDC1BQ8WUY9 529 aa22.42■■□□□ 1.18
PNKP-209ENST00000596726 TWNKQ96RR1 684 aa22.42■■□□□ 1.18
PNKP-209ENST00000596726 TTLL2Q9BWV7 592 aa22.42■■□□□ 1.18
PNKP-209ENST00000596726 CA14Q9ULX7 337 aa22.42■■□□□ 1.18
PNKP-209ENST00000596726 HEPACAM2A8MVW5 462 aa22.41■■□□□ 1.18
PNKP-209ENST00000596726 CILPO75339 1184 aa22.41■■□□□ 1.18
PNKP-209ENST00000596726 PSMC3P17980 439 aa22.41■■□□□ 1.18
PNKP-209ENST00000596726 VCPP55072 806 aaKnown RBP22.41■■□□□ 1.18
PNKP-209ENST00000596726 PFKPQ01813 784 aa22.41■■□□□ 1.18
PNKP-209ENST00000596726 ORC1Q13415 861 aa22.41■■□□□ 1.18
PNKP-209ENST00000596726 WDR44Q5JSH3 913 aa22.41■■□□□ 1.18
PNKP-209ENST00000596726 IER5LQ5T953 404 aa22.41■■□□□ 1.18
PNKP-209ENST00000596726 CWF19L1Q69YN2 538 aaKnown RBP22.41■■□□□ 1.18
PNKP-209ENST00000596726 TRIM59Q8IWR1 403 aa22.41■■□□□ 1.18
PNKP-209ENST00000596726 GPT2Q8TD30 523 aa22.41■■□□□ 1.18
PNKP-209ENST00000596726 TRMT61BQ9BVS5 477 aaKnown RBP22.41■■□□□ 1.18
PNKP-209ENST00000596726 FAM124BQ9H5Z6 455 aaPredicted RBP22.41■■□□□ 1.18
PNKP-209ENST00000596726 OBP2AQ9NY56 170 aa22.41■■□□□ 1.18
PNKP-209ENST00000596726 COL4A2P08572 1712 aa22.4■■□□□ 1.18
PNKP-209ENST00000596726 ATP8B3O60423 1300 aa22.4■■□□□ 1.18
PNKP-209ENST00000596726 FGFR1OPO95684 399 aaKnown RBP22.4■■□□□ 1.18
PNKP-209ENST00000596726 AVPR2P30518 371 aa22.4■■□□□ 1.18
PNKP-209ENST00000596726 CLCN5P51795 746 aa22.4■■□□□ 1.18
PNKP-209ENST00000596726 USP46P62068 366 aa22.4■■□□□ 1.18
PNKP-209ENST00000596726 GRM2Q14416 872 aa22.4■■□□□ 1.18
PNKP-209ENST00000596726 MON1AQ86VX9 555 aa22.4■■□□□ 1.18
PNKP-209ENST00000596726 CMTM8Q8IZV2 173 aa22.4■■□□□ 1.18
PNKP-209ENST00000596726 C12orf29Q8N999 325 aa22.4■■□□□ 1.18
PNKP-209ENST00000596726 MRPS31Q92665 395 aaKnown RBP22.4■■□□□ 1.18
PNKP-209ENST00000596726 LRRC3BQ96PB8 259 aa22.4■■□□□ 1.18
PNKP-209ENST00000596726 MED10Q9BTT4 135 aa22.4■■□□□ 1.18
PNKP-209ENST00000596726 NT5C1AQ9BXI3 368 aa22.4■■□□□ 1.18
PNKP-209ENST00000596726 MFSD1Q9H3U5 465 aa22.4■■□□□ 1.18
PNKP-209ENST00000596726 ARHGEF3Q9NR81 526 aa22.4■■□□□ 1.18
PNKP-209ENST00000596726 HCN4Q9Y3Q4 1203 aa22.4■■□□□ 1.18
PNKP-209ENST00000596726 KIF26AQ9ULI4 1882 aaPredicted RBP22.39■■□□□ 1.18
PNKP-209ENST00000596726 WDFY4Q6ZS81 3184 aa22.39■■□□□ 1.18
PNKP-209ENST00000596726 PRAMEF12O95522 483 aa22.39■■□□□ 1.17
PNKP-209ENST00000596726 CCDC130P13994 396 aa22.39■■□□□ 1.17
PNKP-209ENST00000596726 CD58P19256 250 aa22.39■■□□□ 1.17
PNKP-209ENST00000596726 STARD6P59095 220 aa22.39■■□□□ 1.17
PNKP-209ENST00000596726 SLC44A4Q53GD3 710 aa22.39■■□□□ 1.17
PNKP-209ENST00000596726 TXNDC8Q6A555 127 aa22.39■■□□□ 1.17
PNKP-209ENST00000596726 ASTLQ6HA08 431 aaPredicted RBP22.39■■□□□ 1.17
PNKP-209ENST00000596726 PHLDB3Q6NSJ2 640 aa22.39■■□□□ 1.17
PNKP-209ENST00000596726 GPIHBP1Q8IV16 184 aa22.39■■□□□ 1.17
PNKP-209ENST00000596726 TTC39CQ8N584 583 aa22.39■■□□□ 1.17
PNKP-209ENST00000596726 MAB21L3Q8N8X9 362 aa22.39■■□□□ 1.17
PNKP-209ENST00000596726 SMARCD1Q96GM5 515 aa22.39■■□□□ 1.17
PNKP-209ENST00000596726 KCNK16Q96T55 309 aa22.39■■□□□ 1.17
PNKP-209ENST00000596726 CSNK1G1Q9HCP0 422 aa22.39■■□□□ 1.17
PNKP-209ENST00000596726 TRPV5Q9NQA5 729 aa22.39■■□□□ 1.17
PNKP-209ENST00000596726 EHD2Q9NZN4 543 aa22.39■■□□□ 1.17
PNKP-209ENST00000596726 ARIH1Q9Y4X5 557 aaPredicted RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms