RNA–Protein interactions for RNA: ENST00000596351.5

LTBP4-215, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-215ENST00000596351 AMPD3Q01432 767 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 CYP27A1Q02318 531 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 CYP24A1Q07973 514 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 SPEM2Q0P670 501 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 CUL4BQ13620 913 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 SURF1Q15526 300 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 CC2D1AQ6P1N0 951 aaPredicted RBP12.93□□□□□ -0.34
LTBP4-215ENST00000596351 CNNM4Q6P4Q7 775 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 UNC13DQ70J99 1090 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 TRAPPC11Q7Z392 1133 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 SPRYD3Q8NCJ5 442 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 SPATA18Q8TC71 538 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 SECISBP2LQ93073 1101 aaKnown RBP12.93□□□□□ -0.34
LTBP4-215ENST00000596351 SNX21Q969T3 373 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 MYRFLQ96LU7 910 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 CGRRF1Q99675 332 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 MRPL45Q9BRJ2 306 aaKnown RBP12.93□□□□□ -0.34
LTBP4-215ENST00000596351 GZF1Q9H116 711 aaPredicted RBP12.93□□□□□ -0.34
LTBP4-215ENST00000596351 KIF9Q9HAQ2 790 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 SLC39A2Q9NP94 309 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 DLL3Q9NYJ7 618 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 UXTQ9UBK9 157 aaPredicted RBP12.93□□□□□ -0.34
LTBP4-215ENST00000596351 ZMYM5Q9UJ78 669 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 GMEB2Q9UKD1 530 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 CDH9Q9ULB4 789 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 PCDHA7Q9UN72 937 aa12.93□□□□□ -0.34
LTBP4-215ENST00000596351 CNOT1A5YKK6 2376 aaKnown RBP12.93□□□□□ -0.34
LTBP4-215ENST00000596351 UBE4BO95155 1302 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 TPRP12270 2363 aaKnown RBP12.92□□□□□ -0.34
LTBP4-215ENST00000596351 TRAV19A0A0A6YYK7 116 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 PAPSS2O95340 614 aaPredicted RBP12.92□□□□□ -0.34
LTBP4-215ENST00000596351 EGFP01133 1207 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 WARSP23381 471 aaKnown RBP12.92□□□□□ -0.34
LTBP4-215ENST00000596351 LAMA1P25391 3075 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 MAGEA11P43364 429 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 ME1P48163 572 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 PXNP49023 591 aaPredicted RBP12.92□□□□□ -0.34
LTBP4-215ENST00000596351 CASP4P49662 377 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 USP46P62068 366 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 FAM160A1Q05DH4 1040 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 USP4Q13107 963 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 SIM2Q14190 667 aaPredicted RBP12.92□□□□□ -0.34
LTBP4-215ENST00000596351 PUM1Q14671 1186 aaKnown RBP eCLIP12.92□□□□□ -0.34
LTBP4-215ENST00000596351 MTF1Q14872 753 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 PSMD6Q15008 389 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 ZNF77Q15935 545 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 MDH1BQ5I0G3 518 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 RESP18Q5W5W9 173 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 LAIR1Q6GTX8 287 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 C4orf50Q6ZRC1 276 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 DPH6Q7L8W6 267 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 HSCBQ8IWL3 235 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 ARL14EPQ8N8R7 260 aaPredicted RBP12.92□□□□□ -0.34
LTBP4-215ENST00000596351 ELMO3Q96BJ8 720 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 FUBP3Q96I24 572 aaKnown RBP eCLIP12.92□□□□□ -0.34
LTBP4-215ENST00000596351 FNBP1Q96RU3 617 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 DPEP3Q9H4B8 488 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 KIAA1586Q9HCI6 787 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 FBRSL1Q9HCM7 1045 aaKnown RBP12.92□□□□□ -0.34
LTBP4-215ENST00000596351 MAGEC2Q9UBF1 373 aaPredicted RBP12.92□□□□□ -0.34
LTBP4-215ENST00000596351 RAB23Q9ULC3 237 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 WNT6Q9Y6F9 365 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 CHD8Q9HCK8 2581 aa12.92□□□□□ -0.34
LTBP4-215ENST00000596351 HSP90AA1P07900 732 aaKnown RBP12.91□□□□□ -0.34
LTBP4-215ENST00000596351 USP17L7P0C7H9 530 aa12.91□□□□□ -0.34
LTBP4-215ENST00000596351 GRIK1P39086 918 aa12.91□□□□□ -0.34
LTBP4-215ENST00000596351 CACNA2D1P54289 1103 aa12.91□□□□□ -0.34
LTBP4-215ENST00000596351 ZNF268Q14587 947 aaPredicted RBP12.91□□□□□ -0.34
LTBP4-215ENST00000596351 TMEM196Q5HYL7 178 aa12.91□□□□□ -0.34
LTBP4-215ENST00000596351 LONP2Q86WA8 852 aa12.91□□□□□ -0.34
LTBP4-215ENST00000596351 XXYLT1Q8NBI6 393 aa12.91□□□□□ -0.34
LTBP4-215ENST00000596351 ZNF516Q92618 1163 aa12.91□□□□□ -0.34
LTBP4-215ENST00000596351 PCED1BQ96HM7 432 aa12.91□□□□□ -0.34
LTBP4-215ENST00000596351 CHAMP1Q96JM3 812 aa12.91□□□□□ -0.34
LTBP4-215ENST00000596351 SNX25Q9H3E2 840 aa12.91□□□□□ -0.34
LTBP4-215ENST00000596351 MAGEF1Q9HAY2 307 aa12.91□□□□□ -0.34
LTBP4-215ENST00000596351 TMEM30AQ9NV96 361 aa12.91□□□□□ -0.34
LTBP4-215ENST00000596351 GCNT4Q9P109 453 aa12.91□□□□□ -0.34
LTBP4-215ENST00000596351 SERTAD1Q9UHV2 236 aa12.91□□□□□ -0.34
LTBP4-215ENST00000596351 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.91□□□□□ -0.34
LTBP4-215ENST00000596351 EPG5Q9HCE0 2579 aa12.9□□□□□ -0.34
LTBP4-215ENST00000596351 SOBPA7XYQ1 873 aa12.9□□□□□ -0.34
LTBP4-215ENST00000596351 F8VP50 259 aa12.9□□□□□ -0.34
LTBP4-215ENST00000596351 TRDMT1O14717 391 aaKnown RBP12.9□□□□□ -0.34
LTBP4-215ENST00000596351 RNF40O75150 1001 aa12.9□□□□□ -0.34
LTBP4-215ENST00000596351 GJA4P35212 333 aa12.9□□□□□ -0.34
LTBP4-215ENST00000596351 IFNAR2P48551 515 aa12.9□□□□□ -0.34
LTBP4-215ENST00000596351 GALK1P51570 392 aa12.9□□□□□ -0.34
LTBP4-215ENST00000596351 MYL6P60660 151 aa12.9□□□□□ -0.34
LTBP4-215ENST00000596351 TNNC1P63316 161 aa12.9□□□□□ -0.34
LTBP4-215ENST00000596351 ZXDBP98169 803 aa12.9□□□□□ -0.34
LTBP4-215ENST00000596351 DNM1Q05193 864 aaKnown RBP12.9□□□□□ -0.34
LTBP4-215ENST00000596351 GRSF1Q12849 480 aaKnown RBP eCLIP12.9□□□□□ -0.34
LTBP4-215ENST00000596351 KCNB1Q14721 858 aa12.9□□□□□ -0.34
LTBP4-215ENST00000596351 PDGFRLQ15198 375 aa12.9□□□□□ -0.34
LTBP4-215ENST00000596351 BMT2Q1RMZ1 405 aa12.9□□□□□ -0.34
LTBP4-215ENST00000596351 WDR72Q3MJ13 1102 aa12.9□□□□□ -0.34
LTBP4-215ENST00000596351 VSTM1Q6UX27 236 aa12.9□□□□□ -0.34
LTBP4-215ENST00000596351 HS2ST1Q7LGA3 356 aa12.9□□□□□ -0.34
LTBP4-215ENST00000596351 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms