RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 GPR152Q8TDT2 470 aa20.51■□□□□ 0.87
PNKP-207ENST00000596014 HNRNPABQ99729 332 aaKnown RBP20.51■□□□□ 0.87
PNKP-207ENST00000596014 FAM207AQ9NSI2 230 aaPredicted RBP20.51■□□□□ 0.87
PNKP-207ENST00000596014 TMEM30AQ9NV96 361 aa20.51■□□□□ 0.87
PNKP-207ENST00000596014 HCFC1R1Q9NWW0 138 aa20.51■□□□□ 0.87
PNKP-207ENST00000596014 DNMT3BQ9UBC3 853 aaKnown RBP20.51■□□□□ 0.87
PNKP-207ENST00000596014 FAM50BQ9Y247 325 aa20.51■□□□□ 0.87
PNKP-207ENST00000596014 TCF20Q9UGU0 1960 aaKnown RBP20.51■□□□□ 0.87
PNKP-207ENST00000596014 VCANP13611 3396 aa20.5■□□□□ 0.87
PNKP-207ENST00000596014 ATP8B3O60423 1300 aa20.5■□□□□ 0.87
PNKP-207ENST00000596014 NOL4O94818 638 aa20.5■□□□□ 0.87
PNKP-207ENST00000596014 PAEPP09466 180 aa20.5■□□□□ 0.87
PNKP-207ENST00000596014 IL9P15248 144 aa20.5■□□□□ 0.87
PNKP-207ENST00000596014 PTPN2P17706 415 aa20.5■□□□□ 0.87
PNKP-207ENST00000596014 GRIK1P39086 918 aa20.5■□□□□ 0.87
PNKP-207ENST00000596014 ZNF132P52740 706 aa20.5■□□□□ 0.87
PNKP-207ENST00000596014 CACNA2D1P54289 1103 aa20.5■□□□□ 0.87
PNKP-207ENST00000596014 PPP1R26Q5T8A7 1209 aaPredicted RBP20.5■□□□□ 0.87
PNKP-207ENST00000596014 DNAJB7Q7Z6W7 309 aaPredicted RBP20.5■□□□□ 0.87
PNKP-207ENST00000596014 RBBP8NLQ8NC74 664 aaPredicted RBP20.5■□□□□ 0.87
PNKP-207ENST00000596014 GIPC2Q8TF65 315 aa20.5■□□□□ 0.87
PNKP-207ENST00000596014 SHC3Q92529 594 aa20.5■□□□□ 0.87
PNKP-207ENST00000596014 PCMTD1Q96MG8 357 aaPredicted RBP20.5■□□□□ 0.87
PNKP-207ENST00000596014 NAA15Q9BXJ9 866 aaKnown RBP20.5■□□□□ 0.87
PNKP-207ENST00000596014 WDR6Q9NNW5 1121 aaKnown RBP20.5■□□□□ 0.87
PNKP-207ENST00000596014 KIAA1257Q9ULG3 409 aa20.5■□□□□ 0.87
PNKP-207ENST00000596014 ASB3Q9Y575 518 aa20.5■□□□□ 0.87
PNKP-207ENST00000596014 FHOD1Q9Y613 1164 aa20.5■□□□□ 0.87
PNKP-207ENST00000596014 KRT5P13647 590 aa20.49■□□□□ 0.87
PNKP-207ENST00000596014 RFX1P22670 979 aa20.49■□□□□ 0.87
PNKP-207ENST00000596014 SDHAF4Q5VUM1 108 aa20.49■□□□□ 0.87
PNKP-207ENST00000596014 PSMG2Q969U7 264 aa20.49■□□□□ 0.87
PNKP-207ENST00000596014 SMARCD1Q96GM5 515 aa20.49■□□□□ 0.87
PNKP-207ENST00000596014 GANQ9H2C0 597 aa20.49■□□□□ 0.87
PNKP-207ENST00000596014 POMKQ9H5K3 350 aa20.49■□□□□ 0.87
PNKP-207ENST00000596014 GREB1Q4ZG55 1949 aa20.49■□□□□ 0.87
PNKP-207ENST00000596014 F8VP50 259 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 VDRP11473 427 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 BMP1P13497 986 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 CD19P15391 556 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 ADORA2BP29275 332 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 UBASH3AP57075 661 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 NTHL1P78549 312 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 VEPH1Q14D04 833 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 SGO2Q562F6 1265 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 ARHGAP17Q68EM7 881 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 ITIH5Q86UX2 942 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 C8orf48Q96LL4 319 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 KCNK16Q96T55 309 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 CORO1BQ9BR76 489 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 DENND4AQ7Z401 1863 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 FOXN3O00409 490 aaPredicted RBP20.48■□□□□ 0.87
PNKP-207ENST00000596014 TRIM66O15016 1216 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 EPHB6O15197 1021 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 AP1G2O75843 785 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 USP8P40818 1118 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 RAPGEF1Q13905 1077 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 PTPN21Q16825 1174 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 PABPC1LQ4VXU2 614 aaKnown RBP20.48■□□□□ 0.87
PNKP-207ENST00000596014 SMYD5Q6GMV2 418 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 HS6ST3Q8IZP7 471 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 NEK11Q8NG66 645 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 STK33Q9BYT3 514 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 GPR88Q9GZN0 384 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 KRT82Q9NSB4 513 aa20.48■□□□□ 0.87
PNKP-207ENST00000596014 BEST1O76090 585 aa20.47■□□□□ 0.87
PNKP-207ENST00000596014 RHOP08100 348 aa20.47■□□□□ 0.87
PNKP-207ENST00000596014 ANXA13P27216 316 aa20.47■□□□□ 0.87
PNKP-207ENST00000596014 POLR2FP61218 127 aaKnown RBP20.47■□□□□ 0.87
PNKP-207ENST00000596014 DRAP1Q14919 205 aaPredicted RBP20.47■□□□□ 0.87
PNKP-207ENST00000596014 STKLD1Q8NE28 680 aa20.47■□□□□ 0.87
PNKP-207ENST00000596014 TFAP2BQ92481 460 aa20.47■□□□□ 0.87
PNKP-207ENST00000596014 SPATA17Q96L03 361 aa20.47■□□□□ 0.87
PNKP-207ENST00000596014 CEP295NLQ96MC4 621 aa20.47■□□□□ 0.87
PNKP-207ENST00000596014 SMOQ99835 787 aa20.47■□□□□ 0.87
PNKP-207ENST00000596014 LRRC3Q9BY71 257 aa20.47■□□□□ 0.87
PNKP-207ENST00000596014 DMAP1Q9NPF5 467 aaPredicted RBP20.47■□□□□ 0.87
PNKP-207ENST00000596014 IFNKQ9P0W0 207 aa20.47■□□□□ 0.87
PNKP-207ENST00000596014 CLUHO75153 1309 aa20.47■□□□□ 0.87
PNKP-207ENST00000596014 ZNF638Q14966 1978 aaKnown RBP20.46■□□□□ 0.87
PNKP-207ENST00000596014 A0A1W2PQC6 194 aa20.46■□□□□ 0.87
PNKP-207ENST00000596014 CALCAP01258 141 aa20.46■□□□□ 0.87
PNKP-207ENST00000596014 FAM200BP0CF97 657 aa20.46■□□□□ 0.87
PNKP-207ENST00000596014 HMGA1P17096 107 aaKnown RBP20.46■□□□□ 0.87
PNKP-207ENST00000596014 EPHA5P54756 1037 aa20.46■□□□□ 0.87
PNKP-207ENST00000596014 MTMR3Q13615 1198 aa20.46■□□□□ 0.87
PNKP-207ENST00000596014 TAF12Q16514 161 aa20.46■□□□□ 0.87
PNKP-207ENST00000596014 FAM71AQ8IYT1 594 aa20.46■□□□□ 0.87
PNKP-207ENST00000596014 ZMIZ2Q8NF64 920 aa20.46■□□□□ 0.87
PNKP-207ENST00000596014 ZSWIM1Q9BR11 485 aa20.46■□□□□ 0.87
PNKP-207ENST00000596014 PHF7Q9BWX1 381 aaPredicted RBP20.46■□□□□ 0.87
PNKP-207ENST00000596014 DUSP16Q9BY84 665 aa20.46■□□□□ 0.87
PNKP-207ENST00000596014 CSNK1G1Q9HCP0 422 aa20.46■□□□□ 0.87
PNKP-207ENST00000596014 AVENQ9NQS1 362 aaPredicted RBP20.46■□□□□ 0.87
PNKP-207ENST00000596014 ASAH2Q9NR71 780 aa20.46■□□□□ 0.87
PNKP-207ENST00000596014 DAAM1Q9Y4D1 1078 aa20.46■□□□□ 0.87
PNKP-207ENST00000596014 DOCK8Q8NF50 2099 aa20.45■□□□□ 0.86
PNKP-207ENST00000596014 SLC38A8A6NNN8 435 aa20.45■□□□□ 0.86
PNKP-207ENST00000596014 O00370 1275 aa20.45■□□□□ 0.86
PNKP-207ENST00000596014 PNMA6AP0CW24 399 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms