RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 PMF1Q6P1K2 205 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 SLC35F6Q8N357 371 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 FIBCD1Q8N539 461 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 TPCN2Q8NHX9 752 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 MYLPFQ96A32 169 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 CALR3Q96L12 384 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 B3GALT6Q96L58 329 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 NOX5Q96PH1 765 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 OSGEPQ9NPF4 335 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 CYLDQ9NQC7 956 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 UVRAGQ9P2Y5 699 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 TJP2Q9UDY2 1190 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 PCDHGC5Q9Y5F6 944 aa15.58■□□□□ 0.08
SHKBP1-211ENST00000595945 H7C4K7 107 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 XPO1O14980 1071 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 SOD2P04179 222 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 ERBB2P04626 1255 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 NPR3P17342 541 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 PPM1AP35813 382 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 ZNF268Q14587 947 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 IFI16Q16666 785 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 PPP1R15BQ5SWA1 713 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 C9orf50Q5SZB4 431 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 LLGL2Q6P1M3 1020 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 RSPO2Q6UXX9 243 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 CLEC20AQ6ZU45 233 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 ANKS3Q6ZW76 656 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 TMEM110Q86TL2 294 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 DDX53Q86TM3 631 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 CEP57Q86XR8 500 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 XYLT1Q86Y38 959 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 GPR65Q8IYL9 337 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 DCP1BQ8IZD4 617 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 TNS4Q8IZW8 715 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 LRRC57Q8N9N7 239 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 MSANTD4Q8NCY6 345 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 PIK3R5Q8WYR1 880 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 C18orf8Q96DM3 657 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 MCRS1Q96EZ8 462 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 TMEM169Q96HH4 297 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 HSFY1Q96LI6 401 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 ZBED2Q9BTP6 218 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 NUP85Q9BW27 656 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 OXCT2Q9BYC2 517 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 UBXN6Q9BZV1 441 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 CSNK1G1Q9HCP0 422 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 AAASQ9NRG9 546 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 CTTNBP2NLQ9P2B4 639 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 WDR35Q9P2L0 1181 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 MTRRQ9UBK8 725 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 STRIP2Q9ULQ0 834 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 BACE2Q9Y5Z0 518 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 MYO7AQ13402 2215 aa15.57■□□□□ 0.08
SHKBP1-211ENST00000595945 GRID2IPA4D2P6 1211 aa15.56■□□□□ 0.08
SHKBP1-211ENST00000595945 FAM200BP0CF97 657 aa15.56■□□□□ 0.08
SHKBP1-211ENST00000595945 DSG1Q02413 1049 aa15.56■□□□□ 0.08
SHKBP1-211ENST00000595945 MAMLD1Q13495 774 aa15.56■□□□□ 0.08
SHKBP1-211ENST00000595945 SLFN11Q7Z7L1 901 aa15.56■□□□□ 0.08
SHKBP1-211ENST00000595945 C3orf20Q8ND61 904 aa15.56■□□□□ 0.08
SHKBP1-211ENST00000595945 ZMIZ2Q8NF64 920 aa15.56■□□□□ 0.08
SHKBP1-211ENST00000595945 TRIM58Q8NG06 486 aa15.56■□□□□ 0.08
SHKBP1-211ENST00000595945 IPO4Q8TEX9 1081 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-211ENST00000595945 KCTD13Q8WZ19 329 aa15.56■□□□□ 0.08
SHKBP1-211ENST00000595945 SMOQ99835 787 aa15.56■□□□□ 0.08
SHKBP1-211ENST00000595945 MED10Q9BTT4 135 aa15.56■□□□□ 0.08
SHKBP1-211ENST00000595945 MIS12Q9H081 205 aa15.56■□□□□ 0.08
SHKBP1-211ENST00000595945 KRT82Q9NSB4 513 aa15.56■□□□□ 0.08
SHKBP1-211ENST00000595945 TMEM30AQ9NV96 361 aa15.56■□□□□ 0.08
SHKBP1-211ENST00000595945 CHORDC1Q9UHD1 332 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-211ENST00000595945 SCINQ9Y6U3 715 aa15.56■□□□□ 0.08
SHKBP1-211ENST00000595945 PLXNA3P51805 1871 aa15.56■□□□□ 0.08
SHKBP1-211ENST00000595945 MYO16Q9Y6X6 1858 aa15.56■□□□□ 0.08
SHKBP1-211ENST00000595945 MTCL1Q9Y4B5 1905 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 LCHNA4D1U4 455 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 HHLA1C9JL84 531 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 E5RJQ4 531 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 TLL1O43897 1013 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 PALMO75781 387 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 AP1G2O75843 785 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 BEST1O76090 585 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 OR4Q2P0C623 313 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 ACADSBP45954 432 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 NOP2P46087 812 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 RGS7P49802 495 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 CACNA2D1P54289 1103 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 GPR17Q13304 367 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 SHHQ15465 462 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 NFE2Q16621 373 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 CYP4A22Q5TCH4 519 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 C11orf63Q6NUN7 778 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 PRSS55Q6UWB4 352 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 SYT10Q6XYQ8 523 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 C4orf50Q6ZRC1 276 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 PHLDB2Q86SQ0 1253 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 PIGZQ86VD9 579 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 ZNF564Q8TBZ8 553 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 SMARCD1Q96GM5 515 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 FUBP3Q96I24 572 aaKnown RBP eCLIP15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 ALS2CR12Q96Q35 445 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 ABCB6Q9NP58 842 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms