RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 AP3M2P53677 418 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 ARL4CP56559 192 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 OSTNP61366 133 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 SLC25A11Q02978 314 aaKnown RBP17.3■□□□□ 0.36
LIG1-206ENST00000594067 DUOXA2Q1HG44 320 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 ZNF699Q32M78 642 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 CATSPERGQ6ZRH7 1159 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 MICALL2Q8IY33 904 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 FBXO36Q8NEA4 188 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 ZNF518BQ9C0D4 1074 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 CYLDQ9NQC7 956 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 NXF1Q9UBU9 619 aaKnown RBP17.3■□□□□ 0.36
LIG1-206ENST00000594067 CYTH4Q9UIA0 394 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 POLIQ9UNA4 740 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 SNCAIPQ9Y6H5 919 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 KIF3CO14782 793 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 MSCO60682 206 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 TOM1L1O75674 476 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 RFC5P40937 340 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 RAP1GAPP47736 663 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 HIRAP54198 1017 aaPredicted RBP17.29■□□□□ 0.36
LIG1-206ENST00000594067 ORC1Q13415 861 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 TARBP2Q15633 366 aaKnown RBP17.29■□□□□ 0.36
LIG1-206ENST00000594067 MAPK6Q16659 721 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 BBS9Q3SYG4 887 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 WASHC2DQ5SRD0 308 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 FAM182AQ5T1J6 154 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 ZPBP2Q6X784 338 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 PCGF5Q86SE9 256 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 NAT8LQ8N9F0 302 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 TTC8Q8TAM2 541 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 RSAD2Q8WXG1 361 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 ZNF668Q96K58 619 aaPredicted RBP17.29■□□□□ 0.36
LIG1-206ENST00000594067 PAFAH2Q99487 392 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 MRPL4Q9BYD3 311 aaKnown RBP17.29■□□□□ 0.36
LIG1-206ENST00000594067 DENND2DQ9H6A0 471 aaPredicted RBP17.29■□□□□ 0.36
LIG1-206ENST00000594067 NRBP2Q9NSY0 501 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 PCSK1NQ9UHG2 260 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 PCDHGC3Q9UN70 934 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 PARP14Q460N5 1801 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 ATP6V1C1P21283 382 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 UBA1P22314 1058 aaKnown RBP17.29■□□□□ 0.36
LIG1-206ENST00000594067 ICAM3P32942 547 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 CDH5P33151 784 aaPredicted RBP17.29■□□□□ 0.36
LIG1-206ENST00000594067 PHBP35232 272 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 RASSF2P50749 326 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 NRLP54845 237 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 UNC45BQ8IWX7 931 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 TMEM130Q8N3G9 435 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 ATP11CQ8NB49 1132 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 NPHS2Q9NP85 383 aa17.29■□□□□ 0.36
LIG1-206ENST00000594067 IGKV6D-21A0A0A0MT36 114 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 EME2A4GXA9 379 aaPredicted RBP17.28■□□□□ 0.36
LIG1-206ENST00000594067 DPPA5A6NC42 116 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 SPDYE16A6NNV3 312 aaPredicted RBP17.28■□□□□ 0.36
LIG1-206ENST00000594067 ENTPD5O75356 428 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 KDELR1P24390 212 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 ASPAP45381 313 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 PTDSS1P48651 473 aaKnown RBP17.28■□□□□ 0.36
LIG1-206ENST00000594067 STAT5BP51692 787 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 SEPT7Q16181 437 aaKnown RBP17.28■□□□□ 0.36
LIG1-206ENST00000594067 TAF1BQ53T94 588 aaPredicted RBP17.28■□□□□ 0.36
LIG1-206ENST00000594067 DCAF15Q66K64 600 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 POLNQ7Z5Q5 900 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 CDR2LQ86X02 465 aaPredicted RBP17.28■□□□□ 0.36
LIG1-206ENST00000594067 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.28■□□□□ 0.36
LIG1-206ENST00000594067 THNSL1Q8IYQ7 743 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 ACO2Q99798 780 aaKnown RBP17.28■□□□□ 0.36
LIG1-206ENST00000594067 YIPF3Q9GZM5 350 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 ALG13Q9NP73 1137 aaKnown RBP17.28■□□□□ 0.36
LIG1-206ENST00000594067 NUMBLQ9Y6R0 609 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 RLFQ13129 1914 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 PHIPQ8WWQ0 1821 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 ENO4A6NNW6 628 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 H0Y3Z8 333 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 OGTO15294 1046 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 TMEM63AO94886 807 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 PSMC1P62191 440 aaKnown RBP17.28■□□□□ 0.36
LIG1-206ENST00000594067 OVGP1Q12889 678 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 RASA2Q15283 850 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 TAF5Q15542 800 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 C11orf91Q3C1V1 193 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 CMPK2Q5EBM0 449 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 SPDYAQ5MJ70 313 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 CCDC125Q86Z20 511 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 PALM2Q8IXS6 379 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 TCP10LQ8TDR4 215 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 C12orf42Q96LP6 360 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 TLE6Q9H808 572 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 PPCSQ9HAB8 311 aa17.28■□□□□ 0.36
LIG1-206ENST00000594067 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.28■□□□□ 0.36
LIG1-206ENST00000594067 NDC80O14777 642 aa17.27■□□□□ 0.36
LIG1-206ENST00000594067 MAFO75444 373 aaPredicted RBP17.27■□□□□ 0.36
LIG1-206ENST00000594067 ZWINTO95229 277 aa17.27■□□□□ 0.36
LIG1-206ENST00000594067 MARK3P27448 753 aa17.27■□□□□ 0.36
LIG1-206ENST00000594067 PTPN4P29074 926 aa17.27■□□□□ 0.36
LIG1-206ENST00000594067 GMPSP49915 693 aaPredicted RBP17.27■□□□□ 0.36
LIG1-206ENST00000594067 PLEKHG4Q58EX7 1191 aa17.27■□□□□ 0.36
LIG1-206ENST00000594067 SLC45A4Q5BKX6 768 aa17.27■□□□□ 0.36
LIG1-206ENST00000594067 ADGRD1Q6QNK2 874 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms