RNA–Protein interactions for RNA: ENST00000593174.5

CCDC130-212, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,783 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-212ENST00000593174 PAX3P23760 479 aa17.9■□□□□ 0.46
CCDC130-212ENST00000593174 OR1G1P47890 313 aa17.9■□□□□ 0.46
CCDC130-212ENST00000593174 IRAK1P51617 712 aa17.9■□□□□ 0.46
CCDC130-212ENST00000593174 SLC20A2Q08357 652 aa17.9■□□□□ 0.46
CCDC130-212ENST00000593174 CD300LGQ6UXG3 332 aa17.9■□□□□ 0.46
CCDC130-212ENST00000593174 OSTM1Q86WC4 334 aa17.9■□□□□ 0.46
CCDC130-212ENST00000593174 HASPINQ8TF76 798 aa17.9■□□□□ 0.46
CCDC130-212ENST00000593174 CTNNBL1Q8WYA6 563 aaPredicted RBP17.9■□□□□ 0.46
CCDC130-212ENST00000593174 DNAJB4Q9UDY4 337 aa17.9■□□□□ 0.46
CCDC130-212ENST00000593174 PCDHGC3Q9UN70 934 aa17.9■□□□□ 0.46
CCDC130-212ENST00000593174 PACSIN2Q9UNF0 486 aaPredicted RBP17.9■□□□□ 0.46
CCDC130-212ENST00000593174 LTBP2Q14767 1821 aa17.9■□□□□ 0.46
CCDC130-212ENST00000593174 GOLGA6L10A6NI86 522 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 I3L4J1 428 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 MYO1CO00159 1063 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 HCRTO43612 131 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 PFKMP08237 780 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 LMO2P25791 158 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 BRCC3P46736 316 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 DNA2P51530 1060 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 NOMO3P69849 1222 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 MTMR3Q13615 1198 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 DAAM2Q86T65 1068 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 HES6Q96HZ4 224 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 DNAI2Q9GZS0 605 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 THAP2Q9H0W7 228 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 RASSF4Q9H2L5 321 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 NRDE2Q9H7Z3 1164 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 RSPH14Q9UHP6 348 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 TIMM13Q9Y5L4 95 aaPredicted RBP17.89■□□□□ 0.45
CCDC130-212ENST00000593174 HMGB1P1B2RPK0 211 aaPredicted RBP17.89■□□□□ 0.45
CCDC130-212ENST00000593174 F8W810 466 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 NSFP46459 744 aaKnown RBP17.89■□□□□ 0.45
CCDC130-212ENST00000593174 CNGA2Q16280 664 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 DENND1BQ6P3S1 775 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 NT5DC3Q86UY8 548 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 KLHL7Q8IXQ5 586 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 TMEM86AQ8N2M4 240 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 C12orf29Q8N999 325 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 HINFPQ9BQA5 517 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 MRPL9Q9BYD2 267 aaKnown RBP17.89■□□□□ 0.45
CCDC130-212ENST00000593174 DPEP3Q9H4B8 488 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 IL23AQ9NPF7 189 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 CEP83Q9Y592 693 aa17.89■□□□□ 0.45
CCDC130-212ENST00000593174 BHMG1C9JSJ3 638 aaPredicted RBP17.88■□□□□ 0.45
CCDC130-212ENST00000593174 KRIT1O00522 736 aa17.88■□□□□ 0.45
CCDC130-212ENST00000593174 EIF3HO15372 352 aaKnown RBP eCLIP17.88■□□□□ 0.45
CCDC130-212ENST00000593174 EFCAB14O75071 495 aa17.88■□□□□ 0.45
CCDC130-212ENST00000593174 LSM8O95777 96 aaKnown RBP17.88■□□□□ 0.45
CCDC130-212ENST00000593174 AMHP03971 560 aa17.88■□□□□ 0.45
CCDC130-212ENST00000593174 ITGB1P05556 798 aa17.88■□□□□ 0.45
CCDC130-212ENST00000593174 ODC1P11926 461 aa17.88■□□□□ 0.45
CCDC130-212ENST00000593174 GPC5P78333 572 aa17.88■□□□□ 0.45
CCDC130-212ENST00000593174 CENPCQ03188 943 aa17.88■□□□□ 0.45
CCDC130-212ENST00000593174 KDM7AQ6ZMT4 941 aa17.88■□□□□ 0.45
CCDC130-212ENST00000593174 CRYBG2Q8N1P7 616 aa17.88■□□□□ 0.45
CCDC130-212ENST00000593174 TMEM35BQ8NCS4 154 aa17.88■□□□□ 0.45
CCDC130-212ENST00000593174 RSPH1Q8WYR4 309 aa17.88■□□□□ 0.45
CCDC130-212ENST00000593174 ARHGEF26Q96DR7 871 aa17.88■□□□□ 0.45
CCDC130-212ENST00000593174 PRG3Q9Y2Y8 225 aaPredicted RBP17.88■□□□□ 0.45
CCDC130-212ENST00000593174 SRRM3A6NNA2 597 aaPredicted RBP17.87■□□□□ 0.45
CCDC130-212ENST00000593174 O00370 1275 aa17.87■□□□□ 0.45
CCDC130-212ENST00000593174 GABRDO14764 452 aa17.87■□□□□ 0.45
CCDC130-212ENST00000593174 MICAL2O94851 1124 aa17.87■□□□□ 0.45
CCDC130-212ENST00000593174 LHX1P48742 406 aa17.87■□□□□ 0.45
CCDC130-212ENST00000593174 HADHBP55084 474 aaKnown RBP17.87■□□□□ 0.45
CCDC130-212ENST00000593174 MRPS25P82663 173 aaKnown RBP17.87■□□□□ 0.45
CCDC130-212ENST00000593174 TCEAL1Q15170 157 aa17.87■□□□□ 0.45
CCDC130-212ENST00000593174 PPP1R2P3Q6NXS1 205 aa17.87■□□□□ 0.45
CCDC130-212ENST00000593174 METTL23Q86XA0 190 aa17.87■□□□□ 0.45
CCDC130-212ENST00000593174 RHOT2Q8IXI1 618 aa17.87■□□□□ 0.45
CCDC130-212ENST00000593174 C7orf61Q8IZ16 206 aa17.87■□□□□ 0.45
CCDC130-212ENST00000593174 ARFGAP2Q8N6H7 521 aa17.87■□□□□ 0.45
CCDC130-212ENST00000593174 TNIP3Q96KP6 325 aa17.87■□□□□ 0.45
CCDC130-212ENST00000593174 SUSD3Q96L08 255 aa17.87■□□□□ 0.45
CCDC130-212ENST00000593174 LPIN3Q9BQK8 851 aa17.87■□□□□ 0.45
CCDC130-212ENST00000593174 ZNF518BQ9C0D4 1074 aa17.87■□□□□ 0.45
CCDC130-212ENST00000593174 LHX5Q9H2C1 402 aa17.87■□□□□ 0.45
CCDC130-212ENST00000593174 FAM114A2Q9NRY5 505 aa17.87■□□□□ 0.45
CCDC130-212ENST00000593174 DDX43Q9NXZ2 648 aaKnown RBP17.87■□□□□ 0.45
CCDC130-212ENST00000593174 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.87■□□□□ 0.45
CCDC130-212ENST00000593174 TMEM189-UBE2V1I3L0A0 370 aa17.86■□□□□ 0.45
CCDC130-212ENST00000593174 M0QZQ0 153 aa17.86■□□□□ 0.45
CCDC130-212ENST00000593174 SART1O43290 800 aaKnown RBP17.86■□□□□ 0.45
CCDC130-212ENST00000593174 ALDH2P05091 517 aa17.86■□□□□ 0.45
CCDC130-212ENST00000593174 GNGT1P63211 74 aa17.86■□□□□ 0.45
CCDC130-212ENST00000593174 HLTFQ14527 1009 aaKnown RBP eCLIP17.86■□□□□ 0.45
CCDC130-212ENST00000593174 STILQ15468 1287 aa17.86■□□□□ 0.45
CCDC130-212ENST00000593174 TTMPQ5BVD1 217 aa17.86■□□□□ 0.45
CCDC130-212ENST00000593174 SPDYCQ5MJ68 293 aa17.86■□□□□ 0.45
CCDC130-212ENST00000593174 LCLAT1Q6UWP7 414 aa17.86■□□□□ 0.45
CCDC130-212ENST00000593174 SPATS2Q86XZ4 545 aaKnown RBP17.86■□□□□ 0.45
CCDC130-212ENST00000593174 MCOLN2Q8IZK6 566 aa17.86■□□□□ 0.45
CCDC130-212ENST00000593174 WDTC1Q8N5D0 677 aa17.86■□□□□ 0.45
CCDC130-212ENST00000593174 BADQ92934 168 aa17.86■□□□□ 0.45
CCDC130-212ENST00000593174 TOP1MTQ969P6 601 aa17.86■□□□□ 0.45
CCDC130-212ENST00000593174 ZBTB9Q96C00 473 aa17.86■□□□□ 0.45
CCDC130-212ENST00000593174 ZNF653Q96CK0 615 aa17.86■□□□□ 0.45
CCDC130-212ENST00000593174 FAM49BQ9NUQ9 324 aa17.86■□□□□ 0.45
CCDC130-212ENST00000593174 HCSTQ9UBK5 93 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms