RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 PXNP49023 591 aaPredicted RBP23.29■■□□□ 1.32
DDX39A-215ENST00000590696 ZNF77Q15935 545 aa23.29■■□□□ 1.32
DDX39A-215ENST00000590696 EPM2AIP1Q7L775 607 aaPredicted RBP23.29■■□□□ 1.32
DDX39A-215ENST00000590696 WDR49Q8IV35 697 aa23.29■■□□□ 1.32
DDX39A-215ENST00000590696 FAM160A2Q8N612 972 aaPredicted RBP23.29■■□□□ 1.32
DDX39A-215ENST00000590696 FSIP1Q8NA03 581 aa23.29■■□□□ 1.32
DDX39A-215ENST00000590696 RDH13Q8NBN7 331 aa23.29■■□□□ 1.32
DDX39A-215ENST00000590696 MYLPFQ96A32 169 aa23.29■■□□□ 1.32
DDX39A-215ENST00000590696 MMS19Q96T76 1030 aa23.29■■□□□ 1.32
DDX39A-215ENST00000590696 CRTAC1Q9NQ79 661 aa23.29■■□□□ 1.32
DDX39A-215ENST00000590696 DUS2Q9NX74 493 aaKnown RBP23.29■■□□□ 1.32
DDX39A-215ENST00000590696 SLC8A2Q9UPR5 921 aa23.29■■□□□ 1.32
DDX39A-215ENST00000590696 PDGFRBP09619 1106 aa23.28■■□□□ 1.32
DDX39A-215ENST00000590696 WARSP23381 471 aaKnown RBP23.28■■□□□ 1.32
DDX39A-215ENST00000590696 BDNFP23560 247 aa23.28■■□□□ 1.32
DDX39A-215ENST00000590696 GJA4P35212 333 aa23.28■■□□□ 1.32
DDX39A-215ENST00000590696 CSRP2Q16527 193 aa23.28■■□□□ 1.32
DDX39A-215ENST00000590696 TRAPPC11Q7Z392 1133 aa23.28■■□□□ 1.32
DDX39A-215ENST00000590696 CPA6Q8N4T0 437 aa23.28■■□□□ 1.32
DDX39A-215ENST00000590696 ARL14EPQ8N8R7 260 aaPredicted RBP23.28■■□□□ 1.32
DDX39A-215ENST00000590696 IQUBQ8NA54 791 aa23.28■■□□□ 1.32
DDX39A-215ENST00000590696 OSCP1Q8WVF1 389 aa23.28■■□□□ 1.32
DDX39A-215ENST00000590696 P2RY13Q9BPV8 354 aa23.28■■□□□ 1.32
DDX39A-215ENST00000590696 BACH2Q9BYV9 841 aa23.28■■□□□ 1.32
DDX39A-215ENST00000590696 ECT2Q9H8V3 914 aa23.28■■□□□ 1.32
DDX39A-215ENST00000590696 GCNT4Q9P109 453 aa23.28■■□□□ 1.32
DDX39A-215ENST00000590696 C2orf78A6NCI8 922 aa23.27■■□□□ 1.32
DDX39A-215ENST00000590696 TGFB1I1O43294 461 aa23.27■■□□□ 1.32
DDX39A-215ENST00000590696 CUTAO60888 179 aa23.27■■□□□ 1.32
DDX39A-215ENST00000590696 RNF40O75150 1001 aa23.27■■□□□ 1.32
DDX39A-215ENST00000590696 CST3P01034 146 aaPredicted RBP23.27■■□□□ 1.32
DDX39A-215ENST00000590696 DLATP10515 647 aaKnown RBP23.27■■□□□ 1.32
DDX39A-215ENST00000590696 DRD1P21728 446 aa23.27■■□□□ 1.32
DDX39A-215ENST00000590696 GRIK1P39086 918 aa23.27■■□□□ 1.32
DDX39A-215ENST00000590696 IFNAR2P48551 515 aa23.27■■□□□ 1.32
DDX39A-215ENST00000590696 CYP27A1Q02318 531 aa23.27■■□□□ 1.32
DDX39A-215ENST00000590696 USP4Q13107 963 aa23.27■■□□□ 1.32
DDX39A-215ENST00000590696 MAPRE1Q15691 268 aaKnown RBP23.27■■□□□ 1.32
DDX39A-215ENST00000590696 SNRNP35Q16560 246 aaKnown RBP23.27■■□□□ 1.32
DDX39A-215ENST00000590696 FAM26FQ5R3K3 315 aa23.27■■□□□ 1.32
DDX39A-215ENST00000590696 NAIF1Q69YI7 327 aaPredicted RBP23.27■■□□□ 1.32
DDX39A-215ENST00000590696 SHC4Q6S5L8 630 aa23.27■■□□□ 1.32
DDX39A-215ENST00000590696 VSTM1Q6UX27 236 aa23.27■■□□□ 1.32
DDX39A-215ENST00000590696 PRR23CQ6ZRP0 262 aa23.27■■□□□ 1.32
DDX39A-215ENST00000590696 SPATA17Q96L03 361 aa23.27■■□□□ 1.32
DDX39A-215ENST00000590696 AGPAT3Q9NRZ7 376 aa23.27■■□□□ 1.32
DDX39A-215ENST00000590696 WNT6Q9Y6F9 365 aa23.27■■□□□ 1.32
DDX39A-215ENST00000590696 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.26■■□□□ 1.31
DDX39A-215ENST00000590696 CLIC2O15247 247 aa23.26■■□□□ 1.31
DDX39A-215ENST00000590696 YEATS4O95619 227 aa23.26■■□□□ 1.31
DDX39A-215ENST00000590696 HDCP19113 662 aa23.26■■□□□ 1.31
DDX39A-215ENST00000590696 TNNI1P19237 187 aa23.26■■□□□ 1.31
DDX39A-215ENST00000590696 KCNB1Q14721 858 aa23.26■■□□□ 1.31
DDX39A-215ENST00000590696 CNNM4Q6P4Q7 775 aa23.26■■□□□ 1.31
DDX39A-215ENST00000590696 NELFCDQ8IXH7 590 aa23.26■■□□□ 1.31
DDX39A-215ENST00000590696 NETO1Q8TDF5 533 aa23.26■■□□□ 1.31
DDX39A-215ENST00000590696 SH3RF2Q8TEC5 729 aa23.26■■□□□ 1.31
DDX39A-215ENST00000590696 GAB3Q8WWW8 586 aa23.26■■□□□ 1.31
DDX39A-215ENST00000590696 EXOC4Q96A65 974 aa23.26■■□□□ 1.31
DDX39A-215ENST00000590696 FNBP1Q96RU3 617 aa23.26■■□□□ 1.31
DDX39A-215ENST00000590696 C7orf25Q9BPX7 421 aa23.26■■□□□ 1.31
DDX39A-215ENST00000590696 POLR3BQ9NW08 1133 aaPredicted RBP23.26■■□□□ 1.31
DDX39A-215ENST00000590696 CCDC163A0A0D9SF12 145 aa23.25■■□□□ 1.31
DDX39A-215ENST00000590696 CYP2J2P51589 502 aa23.25■■□□□ 1.31
DDX39A-215ENST00000590696 EML3Q32P44 896 aa23.25■■□□□ 1.31
DDX39A-215ENST00000590696 FOXD4L5Q5VV16 416 aaPredicted RBP23.25■■□□□ 1.31
DDX39A-215ENST00000590696 DENND5BQ6ZUT9 1274 aa23.25■■□□□ 1.31
DDX39A-215ENST00000590696 FOXD4L4Q8WXT5 416 aaPredicted RBP23.25■■□□□ 1.31
DDX39A-215ENST00000590696 CD101Q93033 1021 aa23.25■■□□□ 1.31
DDX39A-215ENST00000590696 ATP2A3Q93084 1043 aa23.25■■□□□ 1.31
DDX39A-215ENST00000590696 PCED1BQ96HM7 432 aa23.25■■□□□ 1.31
DDX39A-215ENST00000590696 CGRRF1Q99675 332 aa23.25■■□□□ 1.31
DDX39A-215ENST00000590696 MRPL45Q9BRJ2 306 aaKnown RBP23.25■■□□□ 1.31
DDX39A-215ENST00000590696 ANAPC1Q9H1A4 1944 aa23.25■■□□□ 1.31
DDX39A-215ENST00000590696 GREB1Q4ZG55 1949 aa23.24■■□□□ 1.31
DDX39A-215ENST00000590696 AXIN1O15169 862 aa23.24■■□□□ 1.31
DDX39A-215ENST00000590696 RPP40O75818 363 aaKnown RBP23.24■■□□□ 1.31
DDX39A-215ENST00000590696 ANXA13P27216 316 aa23.24■■□□□ 1.31
DDX39A-215ENST00000590696 GNL1P36915 607 aaPredicted RBP23.24■■□□□ 1.31
DDX39A-215ENST00000590696 USP46P62068 366 aa23.24■■□□□ 1.31
DDX39A-215ENST00000590696 CYP24A1Q07973 514 aa23.24■■□□□ 1.31
DDX39A-215ENST00000590696 PSMD6Q15008 389 aa23.24■■□□□ 1.31
DDX39A-215ENST00000590696 FBXO43Q4G163 708 aa23.24■■□□□ 1.31
DDX39A-215ENST00000590696 MDH1BQ5I0G3 518 aa23.24■■□□□ 1.31
DDX39A-215ENST00000590696 UNC13DQ70J99 1090 aa23.24■■□□□ 1.31
DDX39A-215ENST00000590696 XXYLT1Q8NBI6 393 aa23.24■■□□□ 1.31
DDX39A-215ENST00000590696 MYCBPAPQ8TBZ2 947 aa23.24■■□□□ 1.31
DDX39A-215ENST00000590696 SCFD1Q8WVM8 642 aa23.24■■□□□ 1.31
DDX39A-215ENST00000590696 CCDC127Q96BQ5 260 aa23.24■■□□□ 1.31
DDX39A-215ENST00000590696 CEP295NLQ96MC4 621 aa23.24■■□□□ 1.31
DDX39A-215ENST00000590696 LINC00597Q9H2U6 94 aa23.24■■□□□ 1.31
DDX39A-215ENST00000590696 SNX25Q9H3E2 840 aa23.24■■□□□ 1.31
DDX39A-215ENST00000590696 NME7Q9Y5B8 376 aa23.24■■□□□ 1.31
DDX39A-215ENST00000590696 RALGAPA1Q6GYQ0 2036 aa23.23■■□□□ 1.31
DDX39A-215ENST00000590696 ATG2BQ96BY7 2078 aa23.23■■□□□ 1.31
DDX39A-215ENST00000590696 SLC30A4O14863 429 aa23.23■■□□□ 1.31
DDX39A-215ENST00000590696 POLR2DO15514 142 aaKnown RBP23.23■■□□□ 1.31
DDX39A-215ENST00000590696 GDF9O60383 454 aa23.23■■□□□ 1.31
DDX39A-215ENST00000590696 TACC1O75410 805 aa23.23■■□□□ 1.31
DDX39A-215ENST00000590696 CCDC192P0DO97 292 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms