RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 PJA1Q8NG27 643 aa19.21■□□□□ 0.67
CIRBP-227ENST00000590188 MRPS31Q92665 395 aaKnown RBP19.21■□□□□ 0.67
CIRBP-227ENST00000590188 ATOH1Q92858 354 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-227ENST00000590188 IRF7Q92985 503 aa19.21■□□□□ 0.67
CIRBP-227ENST00000590188 MED10Q9BTT4 135 aa19.21■□□□□ 0.67
CIRBP-227ENST00000590188 B3GNT5Q9BYG0 378 aa19.21■□□□□ 0.67
CIRBP-227ENST00000590188 HMGXB4Q9UGU5 601 aa19.21■□□□□ 0.67
CIRBP-227ENST00000590188 MUC6Q6W4X9 2439 aa19.2■□□□□ 0.66
CIRBP-227ENST00000590188 F8VP50 259 aa19.2■□□□□ 0.66
CIRBP-227ENST00000590188 ASS1P00966 412 aaKnown RBP19.2■□□□□ 0.66
CIRBP-227ENST00000590188 FAM163BP0C2L3 166 aa19.2■□□□□ 0.66
CIRBP-227ENST00000590188 P4HA1P13674 534 aa19.2■□□□□ 0.66
CIRBP-227ENST00000590188 CD44P16070 742 aaKnown RBP19.2■□□□□ 0.66
CIRBP-227ENST00000590188 DCAF17Q5H9S7 520 aaPredicted RBP19.2■□□□□ 0.66
CIRBP-227ENST00000590188 TCERG1LQ5VWI1 586 aa19.2■□□□□ 0.66
CIRBP-227ENST00000590188 KLHL10Q6JEL2 608 aa19.2■□□□□ 0.66
CIRBP-227ENST00000590188 VSTM1Q6UX27 236 aa19.2■□□□□ 0.66
CIRBP-227ENST00000590188 ACOT1Q86TX2 421 aa19.2■□□□□ 0.66
CIRBP-227ENST00000590188 ADSSL1Q8N142 457 aa19.2■□□□□ 0.66
CIRBP-227ENST00000590188 DNASE1L2Q92874 299 aa19.2■□□□□ 0.66
CIRBP-227ENST00000590188 E2F7Q96AV8 911 aa19.2■□□□□ 0.66
CIRBP-227ENST00000590188 APOBEC3GQ9HC16 384 aaKnown RBP19.2■□□□□ 0.66
CIRBP-227ENST00000590188 TMEM30AQ9NV96 361 aa19.2■□□□□ 0.66
CIRBP-227ENST00000590188 UXTQ9UBK9 157 aaPredicted RBP19.2■□□□□ 0.66
CIRBP-227ENST00000590188 CCL26Q9Y258 94 aa19.2■□□□□ 0.66
CIRBP-227ENST00000590188 FAM170BA6NMN3 283 aa19.19■□□□□ 0.66
CIRBP-227ENST00000590188 GLULP15104 373 aa19.19■□□□□ 0.66
CIRBP-227ENST00000590188 AVPR1AP37288 418 aa19.19■□□□□ 0.66
CIRBP-227ENST00000590188 ASPAP45381 313 aa19.19■□□□□ 0.66
CIRBP-227ENST00000590188 USP46P62068 366 aa19.19■□□□□ 0.66
CIRBP-227ENST00000590188 NOP14P78316 857 aaKnown RBP19.19■□□□□ 0.66
CIRBP-227ENST00000590188 COBLL1Q53SF7 1204 aa19.19■□□□□ 0.66
CIRBP-227ENST00000590188 ALYREFQ86V81 257 aaKnown RBP19.19■□□□□ 0.66
CIRBP-227ENST00000590188 CMTM8Q8IZV2 173 aa19.19■□□□□ 0.66
CIRBP-227ENST00000590188 IMPG2Q9BZV3 1241 aa19.19■□□□□ 0.66
CIRBP-227ENST00000590188 TMEM8AQ9HCN3 771 aa19.19■□□□□ 0.66
CIRBP-227ENST00000590188 LTB4R2Q9NPC1 389 aa19.19■□□□□ 0.66
CIRBP-227ENST00000590188 NDRG2Q9UN36 371 aaKnown RBP19.19■□□□□ 0.66
CIRBP-227ENST00000590188 TICRRQ7Z2Z1 1910 aa19.19■□□□□ 0.66
CIRBP-227ENST00000590188 NUP210Q8TEM1 1887 aaPredicted RBP19.18■□□□□ 0.66
CIRBP-227ENST00000590188 TRIM66O15016 1216 aa19.18■□□□□ 0.66
CIRBP-227ENST00000590188 CCDC130P13994 396 aa19.18■□□□□ 0.66
CIRBP-227ENST00000590188 CD58P19256 250 aa19.18■□□□□ 0.66
CIRBP-227ENST00000590188 TARSP26639 723 aaKnown RBP19.18■□□□□ 0.66
CIRBP-227ENST00000590188 SOX9P48436 509 aa19.18■□□□□ 0.66
CIRBP-227ENST00000590188 MXI1P50539 228 aa19.18■□□□□ 0.66
CIRBP-227ENST00000590188 NDST1P52848 882 aa19.18■□□□□ 0.66
CIRBP-227ENST00000590188 NUBP1P53384 320 aa19.18■□□□□ 0.66
CIRBP-227ENST00000590188 STIM1Q13586 685 aa19.18■□□□□ 0.66
CIRBP-227ENST00000590188 DENND5BQ6ZUT9 1274 aa19.18■□□□□ 0.66
CIRBP-227ENST00000590188 FAM35AQ86V20 835 aa19.18■□□□□ 0.66
CIRBP-227ENST00000590188 BPIFB1Q8TDL5 484 aa19.18■□□□□ 0.66
CIRBP-227ENST00000590188 CSGALNACT1Q8TDX6 532 aa19.18■□□□□ 0.66
CIRBP-227ENST00000590188 TAF4BQ92750 862 aa19.18■□□□□ 0.66
CIRBP-227ENST00000590188 TRMT2BQ96GJ1 504 aaKnown RBP19.18■□□□□ 0.66
CIRBP-227ENST00000590188 SPATA17Q96L03 361 aa19.18■□□□□ 0.66
CIRBP-227ENST00000590188 CYP2S1Q96SQ9 504 aa19.18■□□□□ 0.66
CIRBP-227ENST00000590188 DDX23Q9BUQ8 820 aaKnown RBP19.18■□□□□ 0.66
CIRBP-227ENST00000590188 ELOVL4Q9GZR5 314 aa19.18■□□□□ 0.66
CIRBP-227ENST00000590188 PIAS3Q9Y6X2 628 aa19.18■□□□□ 0.66
CIRBP-227ENST00000590188 PSMA7O14818 248 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 CHADO15335 359 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 CCNE1P24864 410 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 DDX6P26196 483 aaKnown RBP eCLIP19.17■□□□□ 0.66
CIRBP-227ENST00000590188 KPNA1P52294 538 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-227ENST00000590188 FKBP3Q00688 224 aaKnown RBP19.17■□□□□ 0.66
CIRBP-227ENST00000590188 TNK2Q07912 1038 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 FCHO2Q0JRZ9 810 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 ANGPT1Q15389 498 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 CAMK4Q16566 473 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 KRT39Q6A163 491 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 ZNF852Q6ZMS4 543 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 MON1AQ86VX9 555 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 CELF5Q8N6W0 485 aaKnown RBP19.17■□□□□ 0.66
CIRBP-227ENST00000590188 SEMA4DQ92854 862 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 USP13Q92995 863 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-227ENST00000590188 TNIP3Q96KP6 325 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 C8orf48Q96LL4 319 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 MYRFLQ96LU7 910 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 TWNKQ96RR1 684 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 SLC22A12Q96S37 553 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 FAM49BQ9NUQ9 324 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 DLGAP2Q9P1A6 1054 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 CTNND2Q9UQB3 1225 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 OBSL1O75147 1896 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 PTPRDP23468 1912 aa19.17■□□□□ 0.66
CIRBP-227ENST00000590188 C2orf78A6NCI8 922 aa19.16■□□□□ 0.66
CIRBP-227ENST00000590188 SHISA7A6NL88 538 aa19.16■□□□□ 0.66
CIRBP-227ENST00000590188 ARNTLO00327 626 aa19.16■□□□□ 0.66
CIRBP-227ENST00000590188 ABL1P00519 1130 aa19.16■□□□□ 0.66
CIRBP-227ENST00000590188 BMP6P22004 513 aa19.16■□□□□ 0.66
CIRBP-227ENST00000590188 STX17P56962 302 aa19.16■□□□□ 0.66
CIRBP-227ENST00000590188 UBE2HP62256 183 aa19.16■□□□□ 0.66
CIRBP-227ENST00000590188 PAQR9Q6ZVX9 377 aa19.16■□□□□ 0.66
CIRBP-227ENST00000590188 ELOA2Q8IYF1 753 aaPredicted RBP19.16■□□□□ 0.66
CIRBP-227ENST00000590188 ARL14EPQ8N8R7 260 aaPredicted RBP19.16■□□□□ 0.66
CIRBP-227ENST00000590188 C12orf29Q8N999 325 aa19.16■□□□□ 0.66
CIRBP-227ENST00000590188 CCDC150Q8NCX0 1101 aa19.16■□□□□ 0.66
CIRBP-227ENST00000590188 RIN3Q8TB24 985 aa19.16■□□□□ 0.66
CIRBP-227ENST00000590188 KCNK16Q96T55 309 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms