RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 DSC1Q08554 894 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 INCA1Q0VD86 236 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 UPP1Q16831 310 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 ARHGAP44Q17R89 818 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 IQCEQ6IPM2 695 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 PHLDB3Q6NSJ2 640 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 ELMSAN1Q6PJG2 1045 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 ZNF662Q6ZS27 426 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 ZSCAN30Q86W11 494 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 HERVK_113Q902F9 699 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 VCPIP1Q96JH7 1222 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 HSH2DQ96JZ2 352 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 SAMD11Q96NU1 681 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 EIF3CQ99613 913 aaKnown RBP7.79□□□□□ -1.16
SMAD4-210ENST00000590061 PHACTR1Q9C0D0 580 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 XYLT2Q9H1B5 865 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 SIX2Q9NPC8 291 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 KCND1Q9NSA2 647 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 CISHQ9NSE2 258 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 KLK14Q9P0G3 267 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 MARK1Q9P0L2 795 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 PUF60Q9UHX1 559 aaKnown RBP7.79□□□□□ -1.16
SMAD4-210ENST00000590061 SIX4Q9UIU6 781 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 INPP5FQ9Y2H2 1132 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 FAN1Q9Y2M0 1017 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 PCDHB12Q9Y5F1 795 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 SNX9Q9Y5X1 595 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 FHOD1Q9Y613 1164 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 EPN1Q9Y6I3 576 aaPredicted RBP7.79□□□□□ -1.16
SMAD4-210ENST00000590061 SLC4A7Q9Y6M7 1214 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 CEP290O15078 2479 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 TRIP11Q15643 1979 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 TRIM43BA6NCK2 446 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 OR6C75A6NL08 312 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 FOXN3O00409 490 aaPredicted RBP7.78□□□□□ -1.16
SMAD4-210ENST00000590061 CYB561D2O14569 222 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 PTGESO14684 152 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 KRT86O43790 486 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 DGKIO75912 1065 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 C1RP00736 705 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 CST3P01034 146 aaPredicted RBP7.78□□□□□ -1.16
SMAD4-210ENST00000590061 CYP11A1P05108 521 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 SETSIPP0DME0 302 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 CSF2RAP15509 400 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 WARSP23381 471 aaKnown RBP7.78□□□□□ -1.16
SMAD4-210ENST00000590061 COL8A1P27658 744 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 AARSP49588 968 aaKnown RBP eCLIP7.78□□□□□ -1.16
SMAD4-210ENST00000590061 SCNN1GP51170 649 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 TSPY1Q01534 308 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 CDR2Q01850 454 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 KIF5AQ12840 1032 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 LRMPQ12912 555 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 SLC18A3Q16572 532 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 NFE2Q16621 373 aaPredicted RBP7.78□□□□□ -1.16
SMAD4-210ENST00000590061 HABP4Q5JVS0 413 aaKnown RBP7.78□□□□□ -1.16
SMAD4-210ENST00000590061 TMEM270Q6UE05 265 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 IRF2BP2Q7Z5L9 587 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 RTN4RL1Q86UN2 441 aaPredicted RBP7.78□□□□□ -1.16
SMAD4-210ENST00000590061 TMEM192Q8IY95 271 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 DCP1BQ8IZD4 617 aaKnown RBP7.78□□□□□ -1.16
SMAD4-210ENST00000590061 TMEM35BQ8NCS4 154 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 ZSWIM2Q8NEG5 633 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 C2orf15Q8WU43 125 aaKnown RBP7.78□□□□□ -1.16
SMAD4-210ENST00000590061 SEMA4DQ92854 862 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 C18orf25Q96B23 403 aaPredicted RBP7.78□□□□□ -1.16
SMAD4-210ENST00000590061 TRIM43Q96BQ3 446 aaPredicted RBP7.78□□□□□ -1.16
SMAD4-210ENST00000590061 TMEM176AQ96HP8 235 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 SCLYQ96I15 445 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 BTBD6Q96KE9 485 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 SUSD3Q96L08 255 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 CEP295NLQ96MC4 621 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 ZMAT2Q96NC0 199 aaKnown RBP7.78□□□□□ -1.16
SMAD4-210ENST00000590061 YME1L1Q96TA2 773 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 RAD9AQ99638 391 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 NCAPGQ9BPX3 1015 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.78□□□□□ -1.16
SMAD4-210ENST00000590061 TRIM62Q9BVG3 475 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 PLVAPQ9BX97 442 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 LHX5Q9H2C1 402 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 NHEJ1Q9H9Q4 299 aaPredicted RBP7.78□□□□□ -1.16
SMAD4-210ENST00000590061 TBC1D13Q9NVG8 400 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 EHD2Q9NZN4 543 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 MYO1AQ9UBC5 1043 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 HESX1Q9UBX0 185 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 CDH9Q9ULB4 789 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 STRIP2Q9ULQ0 834 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 ZKSCAN5Q9Y2L8 839 aa7.78□□□□□ -1.16
SMAD4-210ENST00000590061 ANK1P16157 1881 aa7.77□□□□□ -1.17
SMAD4-210ENST00000590061 TBKBP1A7MCY6 615 aa7.77□□□□□ -1.17
SMAD4-210ENST00000590061 RBAK-RBAKDNI3L0D1 243 aa7.77□□□□□ -1.17
SMAD4-210ENST00000590061 M0QZQ0 153 aa7.77□□□□□ -1.17
SMAD4-210ENST00000590061 SART1O43290 800 aaKnown RBP7.77□□□□□ -1.17
SMAD4-210ENST00000590061 CILPO75339 1184 aa7.77□□□□□ -1.17
SMAD4-210ENST00000590061 NDUFA10O95299 355 aa7.77□□□□□ -1.17
SMAD4-210ENST00000590061 LCA5LO95447 670 aa7.77□□□□□ -1.17
SMAD4-210ENST00000590061 POMCP01189 267 aa7.77□□□□□ -1.17
SMAD4-210ENST00000590061 CYP11B1P15538 503 aa7.77□□□□□ -1.17
SMAD4-210ENST00000590061 GNA15P30679 374 aa7.77□□□□□ -1.17
SMAD4-210ENST00000590061 ASPAP45381 313 aa7.77□□□□□ -1.17
SMAD4-210ENST00000590061 OR1G1P47890 313 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms