RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 AFMP43652 599 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 RPS9P46781 194 aaKnown RBP8.73□□□□□ -1.01
SMAD4-209ENST00000589941 NCAPHQ15003 741 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 SLC35G1Q2M3R5 365 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 ZBTB41Q5SVQ8 909 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 SPATA31D4Q6ZUB0 917 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 DDX53Q86TM3 631 aaKnown RBP8.73□□□□□ -1.01
SMAD4-209ENST00000589941 SIRT2Q8IXJ6 389 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 PDZD8Q8NEN9 1154 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 FAM168AQ92567 244 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 TNPO1Q92973 898 aaKnown RBP8.73□□□□□ -1.01
SMAD4-209ENST00000589941 IGSF21Q96ID5 467 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 KIRREL1Q96J84 757 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 GBP4Q96PP9 640 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 MCMBPQ9BTE3 642 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 FAM126AQ9BYI3 521 aaPredicted RBP8.73□□□□□ -1.01
SMAD4-209ENST00000589941 NACAP1Q9BZK3 213 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 MAF1Q9H063 256 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 GBP3Q9H0R5 595 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 ARRDC1-AS1Q9H2J1 176 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 ELAC1Q9H777 363 aaKnown RBP8.73□□□□□ -1.01
SMAD4-209ENST00000589941 GRPEL1Q9HAV7 217 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 VAT1LQ9HCJ6 419 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 ST7Q9NRC1 585 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 C2orf42Q9NWW7 574 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 ERAP1Q9NZ08 941 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 DNAJB4Q9UDY4 337 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 KLK13Q9UKR3 277 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 PCDHA2Q9Y5H9 948 aa8.73□□□□□ -1.01
SMAD4-209ENST00000589941 ASCC3Q8N3C0 2202 aaKnown RBP8.73□□□□□ -1.01
SMAD4-209ENST00000589941 TNRC6BQ9UPQ9 1833 aaKnown RBP8.73□□□□□ -1.01
SMAD4-209ENST00000589941 ADAMTS9Q9P2N4 1935 aa8.72□□□□□ -1.01
SMAD4-209ENST00000589941 ANKRD34BA5PLL1 514 aa8.72□□□□□ -1.01
SMAD4-209ENST00000589941 PPM1BO75688 479 aa8.72□□□□□ -1.01
SMAD4-209ENST00000589941 GJB6O95452 261 aa8.72□□□□□ -1.01
SMAD4-209ENST00000589941 EFEMP2O95967 443 aa8.72□□□□□ -1.01
SMAD4-209ENST00000589941 CAPNS1P04632 268 aa8.72□□□□□ -1.01
SMAD4-209ENST00000589941 KCNA2P16389 499 aa8.72□□□□□ -1.01
SMAD4-209ENST00000589941 KLRC2P26717 231 aa8.72□□□□□ -1.01
SMAD4-209ENST00000589941 POLGP54098 1239 aaPredicted RBP8.72□□□□□ -1.01
SMAD4-209ENST00000589941 NTHL1P78549 312 aa8.72□□□□□ -1.01
SMAD4-209ENST00000589941 ADCY1Q08828 1119 aa8.72□□□□□ -1.01
SMAD4-209ENST00000589941 FXNQ16595 210 aa8.72□□□□□ -1.01
SMAD4-209ENST00000589941 KIZQ2M2Z5 673 aa8.72□□□□□ -1.01
SMAD4-209ENST00000589941 GPATCH4Q5T3I0 446 aaKnown RBP8.72□□□□□ -1.01
SMAD4-209ENST00000589941 ECHDC2Q86YB7 292 aa8.72□□□□□ -1.01
SMAD4-209ENST00000589941 STAMQ92783 540 aa8.72□□□□□ -1.01
SMAD4-209ENST00000589941 MAP6Q96JE9 813 aa8.72□□□□□ -1.01
SMAD4-209ENST00000589941 FCRL3Q96P31 734 aaPredicted RBP8.72□□□□□ -1.01
SMAD4-209ENST00000589941 CDADC1Q9BWV3 514 aa8.72□□□□□ -1.01
SMAD4-209ENST00000589941 HEBP1Q9NRV9 189 aa8.72□□□□□ -1.01
SMAD4-209ENST00000589941 CGGBP1Q9UFW8 167 aaPredicted RBP8.72□□□□□ -1.01
SMAD4-209ENST00000589941 ANAPC4Q9UJX5 808 aa8.72□□□□□ -1.01
SMAD4-209ENST00000589941 NDRG2Q9UN36 371 aaKnown RBP8.72□□□□□ -1.01
SMAD4-209ENST00000589941 NEDD4P46934 1319 aa8.72□□□□□ -1.01
SMAD4-209ENST00000589941 SMIM35A0A1B0GVV1 85 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 NOTOA8MTQ0 251 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-209ENST00000589941 DHX16O60231 1041 aaKnown RBP8.71□□□□□ -1.02
SMAD4-209ENST00000589941 CDC45O75419 566 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 GSTM1P09488 218 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 IFNGR1P15260 489 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 SLC11A1P49279 550 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 DUSP4Q13115 394 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 LONRF3Q496Y0 759 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 HSP90AB4PQ58FF6 505 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 MTHFD1LQ6UB35 978 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 ZSWIM9Q86XI8 627 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 PROSER1Q86XN7 944 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 TBC1D10CQ8IV04 446 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 KIAA0319LQ8IZA0 1049 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 ARHGEF39Q8N4T4 335 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 TMEM52Q8NDY8 209 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 PPP1R9BQ96SB3 815 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 PANK2Q9BZ23 570 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 LNPKQ9C0E8 428 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 DCTPP1Q9H773 170 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 TCP11L1Q9NUJ3 509 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 ERVK13-1Q9NX77 482 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 SF3B6Q9Y3B4 125 aaKnown RBP8.71□□□□□ -1.02
SMAD4-209ENST00000589941 PTPRBP23467 1997 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 CACNA1EQ15878 2313 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 PIEZO2Q9H5I5 2752 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 PTPN13Q12923 2485 aa8.71□□□□□ -1.02
SMAD4-209ENST00000589941 APC2O95996 2303 aa8.7□□□□□ -1.02
SMAD4-209ENST00000589941 TEX15Q9BXT5 2789 aa8.7□□□□□ -1.02
SMAD4-209ENST00000589941 K7ESF4 209 aa8.7□□□□□ -1.02
SMAD4-209ENST00000589941 TEX28O15482 410 aa8.7□□□□□ -1.02
SMAD4-209ENST00000589941 STK10O94804 968 aaKnown RBP8.7□□□□□ -1.02
SMAD4-209ENST00000589941 VTNP04004 478 aa8.7□□□□□ -1.02
SMAD4-209ENST00000589941 CD3EP07766 207 aa8.7□□□□□ -1.02
SMAD4-209ENST00000589941 GALTP07902 379 aa8.7□□□□□ -1.02
SMAD4-209ENST00000589941 ZNF806P0C7X5 589 aa8.7□□□□□ -1.02
SMAD4-209ENST00000589941 RAC2P15153 192 aa8.7□□□□□ -1.02
SMAD4-209ENST00000589941 ATP2B1P20020 1258 aa8.7□□□□□ -1.02
SMAD4-209ENST00000589941 ALDH7A1P49419 539 aaKnown RBP8.7□□□□□ -1.02
SMAD4-209ENST00000589941 KCNMB1Q16558 191 aa8.7□□□□□ -1.02
SMAD4-209ENST00000589941 ABHD4Q8TB40 342 aa8.7□□□□□ -1.02
SMAD4-209ENST00000589941 LPPQ93052 612 aa8.7□□□□□ -1.02
SMAD4-209ENST00000589941 RCC1LQ96I51 464 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms