RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 WDR27A2RRH5 827 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 hCG_1984214I3L0E3 225 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 PYCARD-AS1I3L0S3 204 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 FOXN3O00409 490 aaPredicted RBP4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 KLRC1P26715 233 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 PDE6CP51160 858 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 DGKEP52429 567 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 SOX10P56693 466 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 FMO1Q01740 532 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 MYO1EQ12965 1108 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 SEMA5AQ13591 1074 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 DCAF12L1Q5VU92 463 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 SPARTQ8N0X7 666 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 BPIFB1Q8TDL5 484 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 SMCR8Q8TEV9 937 aaPredicted RBP4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 OSCP1Q8WVF1 389 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 ATG4AQ8WYN0 398 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 RFKQ969G6 155 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 TIFAQ96CG3 184 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 UROC1Q96N76 676 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 HAPLN3Q96S86 360 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 STK31Q9BXU1 1019 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 BTBD1Q9H0C5 482 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 ARHGEF3Q9NR81 526 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 STK32BQ9NY57 414 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 HDAC9Q9UKV0 1011 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 SH2B3Q9UQQ2 575 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 MRPS17Q9Y2R5 130 aaKnown RBP4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 PCDHGB6Q9Y5F9 930 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 ENTPD2Q9Y5L3 495 aa4.35□□□□□ -1.71
HMGN1P30-201ENST00000589286 LOC102723971A0A1B0GUV8 181 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 LINC00473A8K010 186 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 VWC2LB2RUY7 222 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 TMEM233B4DJY2 109 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 PQBP1O60828 265 aaKnown RBP4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 INMTO95050 263 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 PDHA1P08559 390 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 EBLN1P0CF75 366 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 GPD1P21695 349 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 PRKAR1BP31321 381 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 PDE1AP54750 535 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 C3orf38Q5JPI3 329 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 TREML2Q5T2D2 321 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 TSTD2Q5T7W7 516 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 RD3Q7Z3Z2 195 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 MICU3Q86XE3 530 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 ADGRG3Q86Y34 549 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 ZNF280BQ86YH2 543 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 YAF2Q8IY57 180 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 OR56A3Q8NH54 315 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 MAML1Q92585 1016 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 PPP2R3CQ969Q6 453 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 STRBPQ96SI9 672 aaKnown RBP4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 CXorf36Q9H7Y0 433 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 CPNE5Q9HCH3 593 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 SERHLQ9NQF3 203 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 XPNPEP3Q9NQH7 507 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 DKK3Q9UBP4 350 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 CCNL1Q9UK58 526 aaPredicted RBP4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 ST3GAL5Q9UNP4 418 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 SSX2IPQ9Y2D8 614 aa4.34□□□□□ -1.71
HMGN1P30-201ENST00000589286 SPATA31A6Q5VVP1 1343 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 RHPN2P1A8MT19 583 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 QSOX1O00391 747 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 MGST3O14880 152 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 RGS10O43665 173 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 KCNA3P22001 575 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 CLK3P49761 638 aaKnown RBP4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 CCT8P50990 548 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 NANOS3P60323 173 aaKnown RBP4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 RPS16P62249 146 aaKnown RBP4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 SLC29A2Q14542 456 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 CERCAMQ5T4B2 595 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 DEPDC1Q5TB30 811 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 CACHD1Q5VU97 1274 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 FBXO42Q6P3S6 717 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 WDR53Q7Z5U6 358 aaPredicted RBP4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 ARHGEF25Q86VW2 580 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 KRT78Q8N1N4 520 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 SDR16C5Q8N3Y7 309 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 LRRC71Q8N4P6 559 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 BOLLQ8N9W6 283 aaKnown RBP4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 XAGE5Q8WWM1 108 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 GLG1Q92896 1179 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 TIMP4Q99727 224 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 PNPLA8Q9NP80 782 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 DDX21Q9NR30 783 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 SERTAD4Q9NUC0 356 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 ASB6Q9NWX5 421 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 ITGB1BP2Q9UKP3 347 aa4.33□□□□□ -1.72
HMGN1P30-201ENST00000589286 A1L4Q6 167 aa4.32□□□□□ -1.72
HMGN1P30-201ENST00000589286 PSMD9O00233 223 aa4.32□□□□□ -1.72
HMGN1P30-201ENST00000589286 CCP110O43303 1012 aa4.32□□□□□ -1.72
HMGN1P30-201ENST00000589286 CAND2O75155 1236 aa4.32□□□□□ -1.72
HMGN1P30-201ENST00000589286 RASAL1O95294 804 aa4.32□□□□□ -1.72
HMGN1P30-201ENST00000589286 KRT18P05783 430 aaKnown RBP4.32□□□□□ -1.72
HMGN1P30-201ENST00000589286 FESP07332 822 aa4.32□□□□□ -1.72
HMGN1P30-201ENST00000589286 IL6RP08887 468 aaPredicted RBP4.32□□□□□ -1.72
HMGN1P30-201ENST00000589286 DLDP09622 509 aaKnown RBP4.32□□□□□ -1.72
HMGN1P30-201ENST00000589286 FAM163BP0C2L3 166 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms