RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 COL4A3Q01955 1670 aa9.44□□□□□ -0.9
SDF2-207ENST00000588472 ZDBF2Q9HCK1 2354 aa9.44□□□□□ -0.9
SDF2-207ENST00000588472 NCANO14594 1321 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 TRIM49BA6NDI0 452 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 F8VP50 259 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 IKBKBO14920 756 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 PRAMEF12O95522 483 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 F11P03951 625 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 CD58P19256 250 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 AVPR1AP37288 418 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 KPNA1P52294 538 aaPredicted RBP9.43□□□□□ -0.9
SDF2-207ENST00000588472 PMS1P54277 932 aaKnown RBP9.43□□□□□ -0.9
SDF2-207ENST00000588472 STIM1Q13586 685 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 CAMK4Q16566 473 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 CFAP221Q4G0U5 840 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 ZCWPW2Q504Y3 356 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 DCAF17Q5H9S7 520 aaPredicted RBP9.43□□□□□ -0.9
SDF2-207ENST00000588472 ACOT1Q86TX2 421 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 DTWD2Q8NBA8 298 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 B3GALNT2Q8NCR0 500 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 CCDC150Q8NCX0 1101 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 CSGALNACT1Q8TDX6 532 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 TAS1R2Q8TE23 839 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 TMEM174Q8WUU8 243 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 IRF7Q92985 503 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 FUBP3Q96I24 572 aaKnown RBP eCLIP9.43□□□□□ -0.9
SDF2-207ENST00000588472 LRRC3BQ96PB8 259 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 CYP2S1Q96SQ9 504 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 MKNK1Q9BUB5 465 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 B3GNT5Q9BYG0 378 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 IMPG2Q9BZV3 1241 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 ZNF518BQ9C0D4 1074 aa9.43□□□□□ -0.9
SDF2-207ENST00000588472 KANSL1LA0AUZ9 987 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 MAPK13O15264 365 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 NOL4O94818 638 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 STAU1O95793 577 aaKnown RBP9.42□□□□□ -0.9
SDF2-207ENST00000588472 CKMP06732 381 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 CCDC130P13994 396 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 MAGEA11P43364 429 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 NDST1P52848 882 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 CACNA2D1P54289 1103 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 STARD6P59095 220 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 USP46P62068 366 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 PRKCQQ04759 706 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 NFIL3Q16649 462 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 EDRF1Q3B7T1 1238 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 PHLDB3Q6NSJ2 640 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 ZNF852Q6ZMS4 543 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 DENND5BQ6ZUT9 1274 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 TMEM150AQ86TG1 271 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 CMTM8Q8IZV2 173 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 PJA1Q8NG27 643 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 DEPDC1BQ8WUY9 529 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 E2F7Q96AV8 911 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 TNIP3Q96KP6 325 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 TRPV4Q9HBA0 871 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 TMEM8AQ9HCN3 771 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 FAM49BQ9NUQ9 324 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 UXTQ9UBK9 157 aaPredicted RBP9.42□□□□□ -0.9
SDF2-207ENST00000588472 HMGXB4Q9UGU5 601 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 CTNND2Q9UQB3 1225 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 CCL26Q9Y258 94 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 PIAS3Q9Y6X2 628 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 ZFHX2Q9C0A1 2572 aaPredicted RBP9.42□□□□□ -0.9
SDF2-207ENST00000588472 FRYLO94915 3013 aa9.42□□□□□ -0.9
SDF2-207ENST00000588472 TRAV19A0A0A6YYK7 116 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 C2orf78A6NCI8 922 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 PSMA7O14818 248 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 TRIM66O15016 1216 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 ASS1P00966 412 aaKnown RBP9.41□□□□□ -0.9
SDF2-207ENST00000588472 FAM163BP0C2L3 166 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 GLULP15104 373 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 CD44P16070 742 aaKnown RBP9.41□□□□□ -0.9
SDF2-207ENST00000588472 CCNE1P24864 410 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 ADORA2BP29275 332 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 SOX9P48436 509 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 STX17P56962 302 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 NOP14P78316 857 aaKnown RBP9.41□□□□□ -0.9
SDF2-207ENST00000588472 FKBP3Q00688 224 aaKnown RBP9.41□□□□□ -0.9
SDF2-207ENST00000588472 TNK2Q07912 1038 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 ANGPT1Q15389 498 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 ZNF394Q53GI3 561 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 KRT39Q6A163 491 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 VSTM1Q6UX27 236 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 DGLUCYQ7Z3D6 616 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 MON1AQ86VX9 555 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 CREBRFQ8IUR6 639 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 CCDC105Q8IYK2 499 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 CELF5Q8N6W0 485 aaKnown RBP9.41□□□□□ -0.9
SDF2-207ENST00000588472 ARL14EPQ8N8R7 260 aaPredicted RBP9.41□□□□□ -0.9
SDF2-207ENST00000588472 C12orf29Q8N999 325 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 SPATA20Q8TB22 786 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 BPIFB1Q8TDL5 484 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 NELFBQ8WX92 580 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 TAF4BQ92750 862 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 SEMA4DQ92854 862 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 DNASE1L2Q92874 299 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 USP13Q92995 863 aaPredicted RBP9.41□□□□□ -0.9
SDF2-207ENST00000588472 JAKMIP2Q96AA8 810 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 SPATA17Q96L03 361 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms