RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 MYBL1P10243 752 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 MYOGP15173 224 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 BCAT1P54687 386 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 PLCB3Q01970 1234 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 MLLT1Q03111 559 aaPredicted RBP11.95□□□□□ -0.5
VMP1-207ENST00000588131 BST2Q10589 180 aaKnown RBP11.95□□□□□ -0.5
VMP1-207ENST00000588131 PTPN14Q15678 1187 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 USP41Q3LFD5 358 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 SLC39A12Q504Y0 691 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 PPP1R2P3Q6NXS1 205 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 PMF1Q6P1K2 205 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 CLEC20AQ6ZU45 233 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 SLC35F6Q8N357 371 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 SLC35G2Q8TBE7 412 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 SLC35F5Q8WV83 523 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 RFFLQ8WZ73 363 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 CLP1Q92989 425 aaKnown RBP11.95□□□□□ -0.5
VMP1-207ENST00000588131 SMOQ99835 787 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 DUSP16Q9BY84 665 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 AVENQ9NQS1 362 aaPredicted RBP11.95□□□□□ -0.5
VMP1-207ENST00000588131 AAASQ9NRG9 546 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 CHST7Q9NS84 486 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 PTPRDP23468 1912 aa11.95□□□□□ -0.5
VMP1-207ENST00000588131 TCRBV5S1A1TA0A578 114 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 LINC01553A4QN01 128 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 C19orf67A6NJJ6 358 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 OR6C75A6NL08 312 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 E5RJQ4 531 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 H7C4K7 107 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 XPO1O14980 1071 aaKnown RBP11.94□□□□□ -0.5
VMP1-207ENST00000588131 ADAM12O43184 909 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 KIF5CO60282 957 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 AP1G2O75843 785 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 FGF18O76093 207 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 GJB6O95452 261 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 CALB1P05937 261 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 FAM200BP0CF97 657 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 NPR3P17342 541 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 RPL17P18621 184 aaKnown RBP11.94□□□□□ -0.5
VMP1-207ENST00000588131 BDNFP23560 247 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 PPM1AP35813 382 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 NOP2P46087 812 aaKnown RBP11.94□□□□□ -0.5
VMP1-207ENST00000588131 GLUD2P49448 558 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 ARPP19P56211 112 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 MAP3K7CLP57077 242 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 GNG11P61952 73 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 TCEAL1Q15170 157 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 PSMD5Q16401 504 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 ZNF569Q5MCW4 686 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 ANKS3Q6ZW76 656 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 SPRED2Q7Z698 418 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 DDX53Q86TM3 631 aaKnown RBP11.94□□□□□ -0.5
VMP1-207ENST00000588131 PIGZQ86VD9 579 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 XYLT1Q86Y38 959 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 SPATA2LQ8IUW3 424 aaPredicted RBP11.94□□□□□ -0.5
VMP1-207ENST00000588131 KLHL23Q8NBE8 558 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 ZMIZ2Q8NF64 920 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 RIN2Q8WYP3 895 aaPredicted RBP11.94□□□□□ -0.5
VMP1-207ENST00000588131 PIK3R5Q8WYR1 880 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 TRIM11Q96F44 468 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 VCPIP1Q96JH7 1222 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 NOX5Q96PH1 765 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 WDR24Q96S15 920 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 NUP85Q9BW27 656 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 SLC4A5Q9BY07 1137 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 ST7Q9NRC1 585 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 CTTNBP2NLQ9P2B4 639 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 MTRRQ9UBK8 725 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 PCDHB12Q9Y5F1 795 aa11.94□□□□□ -0.5
VMP1-207ENST00000588131 PATJQ8NI35 1801 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 GRID2IPA4D2P6 1211 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 CARNS1A5YM72 827 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 H0YGN5 161 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 GOLGA8SH3BPF8 625 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 C2CD2LO14523 706 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 MTA2O94776 668 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 VNN2O95498 520 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 TNNT1P13805 278 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 CPB1P15086 417 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 CTNNB1P35222 781 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 PLA2G4AP47712 749 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 GABRB2P47870 512 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 RPL34P49207 117 aaKnown RBP11.93□□□□□ -0.5
VMP1-207ENST00000588131 NAP1L1P55209 391 aaKnown RBP11.93□□□□□ -0.5
VMP1-207ENST00000588131 ETF1P62495 437 aaKnown RBP11.93□□□□□ -0.5
VMP1-207ENST00000588131 DSG1Q02413 1049 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 MAPRE1Q15691 268 aaKnown RBP11.93□□□□□ -0.5
VMP1-207ENST00000588131 LIN9Q5TKA1 542 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 PLEKHA7Q6IQ23 1121 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 KIAA1841Q6NSI8 718 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 SYT10Q6XYQ8 523 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 FAM183BPQ6ZVS7 135 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 RHOT2Q8IXI1 618 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 DCP1BQ8IZD4 617 aaKnown RBP11.93□□□□□ -0.5
VMP1-207ENST00000588131 VPS52Q8N1B4 723 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 RNF10Q8N5U6 811 aaKnown RBP11.93□□□□□ -0.5
VMP1-207ENST00000588131 TPCN2Q8NHX9 752 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 ZNF564Q8TBZ8 553 aaPredicted RBP11.93□□□□□ -0.5
VMP1-207ENST00000588131 IPO4Q8TEX9 1081 aaKnown RBP11.93□□□□□ -0.5
VMP1-207ENST00000588131 STK32AQ8WU08 396 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms