RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 FZD5Q13467 585 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 MAPRE1Q15691 268 aaKnown RBP21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 NFIL3Q16649 462 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 SGSM1Q2NKQ1 1148 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 FRMD5Q7Z6J6 570 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 MON1AQ86VX9 555 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 BPIFB1Q8TDL5 484 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 CSGALNACT1Q8TDX6 532 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 MRPS31Q92665 395 aaKnown RBP21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 USP13Q92995 863 aaPredicted RBP21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 ZNF518BQ9C0D4 1074 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 VRTNQ9H8Y1 702 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 TRPC7Q9HCX4 862 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 OBSL1O75147 1896 aa21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 NUP210Q8TEM1 1887 aaPredicted RBP21.37■■□□□ 1.01
TRAPPC6A-203ENST00000587818 GREB1Q4ZG55 1949 aa21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 IKBKBO14920 756 aa21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 KRT13P13646 458 aa21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 CCNE1P24864 410 aa21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 PSMC2P35998 433 aaKnown RBP21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 TNK2Q07912 1038 aa21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 ZCWPW2Q504Y3 356 aa21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 VSTM1Q6UX27 236 aa21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 C1orf210Q8IVY1 113 aa21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 CELF5Q8N6W0 485 aaKnown RBP21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 TTC16Q8NEE8 873 aa21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 FAM3CQ92520 227 aa21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 MYRFLQ96LU7 910 aa21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 SLC22A12Q96S37 553 aa21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 NELL2Q99435 816 aa21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 BCO2Q9BYV7 579 aa21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 TRPV5Q9NQA5 729 aa21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 GKN1Q9NS71 199 aa21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 TMEM30AQ9NV96 361 aa21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 SPATA6Q9NWH7 488 aaPredicted RBP21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 GTSE1Q9NYZ3 720 aa21.36■■□□□ 1.01
TRAPPC6A-203ENST00000587818 PTPRDP23468 1912 aa21.35■■□□□ 1.01
TRAPPC6A-203ENST00000587818 F8VP50 259 aa21.35■■□□□ 1.01
TRAPPC6A-203ENST00000587818 MAPK13O15264 365 aa21.35■■□□□ 1.01
TRAPPC6A-203ENST00000587818 ANXA13P27216 316 aa21.35■■□□□ 1.01
TRAPPC6A-203ENST00000587818 WEE1P30291 646 aa21.35■■□□□ 1.01
TRAPPC6A-203ENST00000587818 AVPR1AP37288 418 aa21.35■■□□□ 1.01
TRAPPC6A-203ENST00000587818 KPNA1P52294 538 aaPredicted RBP21.35■■□□□ 1.01
TRAPPC6A-203ENST00000587818 ARHGAP29Q52LW3 1261 aa21.35■■□□□ 1.01
TRAPPC6A-203ENST00000587818 ZNF658Q5TYW1 1059 aaPredicted RBP21.35■■□□□ 1.01
TRAPPC6A-203ENST00000587818 ACOT1Q86TX2 421 aa21.35■■□□□ 1.01
TRAPPC6A-203ENST00000587818 B3GALNT2Q8NCR0 500 aa21.35■■□□□ 1.01
TRAPPC6A-203ENST00000587818 SMARCE1Q969G3 411 aa21.35■■□□□ 1.01
TRAPPC6A-203ENST00000587818 TRMT2BQ96GJ1 504 aaKnown RBP21.35■■□□□ 1.01
TRAPPC6A-203ENST00000587818 OSBPL6Q9BZF3 934 aa21.35■■□□□ 1.01
TRAPPC6A-203ENST00000587818 RMND1Q9NWS8 449 aa21.35■■□□□ 1.01
TRAPPC6A-203ENST00000587818 OBP2AQ9NY56 170 aa21.35■■□□□ 1.01
TRAPPC6A-203ENST00000587818 UXTQ9UBK9 157 aaPredicted RBP21.35■■□□□ 1.01
TRAPPC6A-203ENST00000587818 MAN2B1O00754 1011 aa21.34■■□□□ 1.01
TRAPPC6A-203ENST00000587818 SMC2O95347 1197 aa21.34■■□□□ 1.01
TRAPPC6A-203ENST00000587818 PIK3CAP42336 1068 aa21.34■■□□□ 1.01
TRAPPC6A-203ENST00000587818 IFRD2Q12894 506 aaPredicted RBP21.34■■□□□ 1.01
TRAPPC6A-203ENST00000587818 ANKRD40Q6AI12 368 aa21.34■■□□□ 1.01
TRAPPC6A-203ENST00000587818 INTS8Q75QN2 995 aaKnown RBP21.34■■□□□ 1.01
TRAPPC6A-203ENST00000587818 MAML2Q8IZL2 1156 aaPredicted RBP21.34■■□□□ 1.01
TRAPPC6A-203ENST00000587818 ARL14EPQ8N8R7 260 aaPredicted RBP21.34■■□□□ 1.01
TRAPPC6A-203ENST00000587818 RIN3Q8TB24 985 aa21.34■■□□□ 1.01
TRAPPC6A-203ENST00000587818 TAS1R2Q8TE23 839 aa21.34■■□□□ 1.01
TRAPPC6A-203ENST00000587818 SPATA17Q96L03 361 aa21.34■■□□□ 1.01
TRAPPC6A-203ENST00000587818 TIGD1Q96MW7 591 aa21.34■■□□□ 1.01
TRAPPC6A-203ENST00000587818 GSDMAQ96QA5 445 aa21.34■■□□□ 1.01
TRAPPC6A-203ENST00000587818 MED10Q9BTT4 135 aa21.34■■□□□ 1.01
TRAPPC6A-203ENST00000587818 LMAN1LQ9HAT1 526 aa21.34■■□□□ 1.01
TRAPPC6A-203ENST00000587818 TDP1Q9NUW8 608 aa21.34■■□□□ 1.01
TRAPPC6A-203ENST00000587818 MRPS17Q9Y2R5 130 aaKnown RBP21.34■■□□□ 1.01
TRAPPC6A-203ENST00000587818 COL4A2P08572 1712 aa21.34■■□□□ 1.01
TRAPPC6A-203ENST00000587818 KIF26AQ9ULI4 1882 aaPredicted RBP21.34■■□□□ 1.01
TRAPPC6A-203ENST00000587818 ANAPC1Q9H1A4 1944 aa21.33■■□□□ 1.01
TRAPPC6A-203ENST00000587818 C2orf78A6NCI8 922 aa21.33■■□□□ 1.01
TRAPPC6A-203ENST00000587818 ASS1P00966 412 aaKnown RBP21.33■■□□□ 1.01
TRAPPC6A-203ENST00000587818 DDX6P26196 483 aaKnown RBP eCLIP21.33■■□□□ 1.01
TRAPPC6A-203ENST00000587818 PMS1P54277 932 aaKnown RBP21.33■■□□□ 1.01
TRAPPC6A-203ENST00000587818 TRIM68Q6AZZ1 485 aa21.33■■□□□ 1.01
TRAPPC6A-203ENST00000587818 DENND5BQ6ZUT9 1274 aa21.33■■□□□ 1.01
TRAPPC6A-203ENST00000587818 PAQR9Q6ZVX9 377 aa21.33■■□□□ 1.01
TRAPPC6A-203ENST00000587818 ZNF687Q8N1G0 1237 aa21.33■■□□□ 1.01
TRAPPC6A-203ENST00000587818 CLDN23Q96B33 292 aa21.33■■□□□ 1.01
TRAPPC6A-203ENST00000587818 C8orf48Q96LL4 319 aa21.33■■□□□ 1.01
TRAPPC6A-203ENST00000587818 KCNK16Q96T55 309 aa21.33■■□□□ 1.01
TRAPPC6A-203ENST00000587818 APOBEC3GQ9HC16 384 aaKnown RBP21.33■■□□□ 1.01
TRAPPC6A-203ENST00000587818 HMGXB4Q9UGU5 601 aa21.33■■□□□ 1.01
TRAPPC6A-203ENST00000587818 R4GN57 208 aa21.33■■□□□ 1.01
TRAPPC6A-203ENST00000587818 PIEZO1Q92508 2521 aa21.32■■□□□ 1
TRAPPC6A-203ENST00000587818 TRIM66O15016 1216 aa21.32■■□□□ 1
TRAPPC6A-203ENST00000587818 CETN3O15182 167 aa21.32■■□□□ 1
TRAPPC6A-203ENST00000587818 NCAM2O15394 837 aa21.32■■□□□ 1
TRAPPC6A-203ENST00000587818 ABL1P00519 1130 aa21.32■■□□□ 1
TRAPPC6A-203ENST00000587818 SP9P0CG40 484 aa21.32■■□□□ 1
TRAPPC6A-203ENST00000587818 NBL1P41271 181 aa21.32■■□□□ 1
TRAPPC6A-203ENST00000587818 NDST1P52848 882 aa21.32■■□□□ 1
TRAPPC6A-203ENST00000587818 EDRF1Q3B7T1 1238 aa21.32■■□□□ 1
TRAPPC6A-203ENST00000587818 TXNDC11Q6PKC3 985 aa21.32■■□□□ 1
TRAPPC6A-203ENST00000587818 SPATA20Q8TB22 786 aa21.32■■□□□ 1
TRAPPC6A-203ENST00000587818 TAF4BQ92750 862 aa21.32■■□□□ 1
TRAPPC6A-203ENST00000587818 THG1LQ9NWX6 298 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms