RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 SPIRE2Q8WWL2 714 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 SLC22A12Q96S37 553 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 CYP2S1Q96SQ9 504 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 PI4K2AQ9BTU6 479 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 TMEM206Q9H813 350 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 RPF1Q9H9Y2 349 aaKnown RBP9.22□□□□□ -0.93
SDF2-204ENST00000587338 PCDHB5Q9Y5E4 795 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 CFAP46Q8IYW2 2715 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 TENM4Q6N022 2769 aa9.21□□□□□ -0.93
SDF2-204ENST00000587338 TRAV19A0A0A6YYK7 116 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 FAM221BA6H8Z2 402 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 PP2D1A8MPX8 630 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 HNRNPDLO14979 420 aaKnown RBP9.21□□□□□ -0.94
SDF2-204ENST00000587338 TADA3O75528 432 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 KLF8O95600 359 aaPredicted RBP9.21□□□□□ -0.94
SDF2-204ENST00000587338 NFATC1O95644 943 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 CAPNS1P04632 268 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 USP17L7P0C7H9 530 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 PAX3P23760 479 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 GUCY2CP25092 1073 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 OPRD1P41143 372 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 DPP6P42658 865 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 LIG4P49917 911 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 GFPT1Q06210 699 aaPredicted RBP9.21□□□□□ -0.94
SDF2-204ENST00000587338 NBR1Q14596 966 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 KCNB1Q14721 858 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 TMEM132DQ14C87 1099 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 ZRSR1Q15695 479 aaKnown RBP9.21□□□□□ -0.94
SDF2-204ENST00000587338 DDR2Q16832 855 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 FOXD4L6Q3SYB3 417 aaPredicted RBP9.21□□□□□ -0.94
SDF2-204ENST00000587338 ZC2HC1CQ53FD0 456 aaPredicted RBP9.21□□□□□ -0.94
SDF2-204ENST00000587338 KRT79Q5XKE5 535 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 WSCD1Q658N2 575 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 TMEM92Q6UXU6 159 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 FOXD4L3Q6VB84 417 aaPredicted RBP9.21□□□□□ -0.94
SDF2-204ENST00000587338 KCNK18Q7Z418 384 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 PGBD3Q8N328 593 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 MINDY1Q8N5J2 469 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 ALLCQ8N6M5 410 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 TXNDC5Q8NBS9 432 aaKnown RBP9.21□□□□□ -0.94
SDF2-204ENST00000587338 OR2I1PQ8NGU4 316 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 HNRNPLLQ8WVV9 542 aaKnown RBP9.21□□□□□ -0.94
SDF2-204ENST00000587338 HMGB4Q8WW32 186 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 BBC3Q96PG8 261 aaPredicted RBP9.21□□□□□ -0.94
SDF2-204ENST00000587338 NTPCRQ9BSD7 190 aaKnown RBP9.21□□□□□ -0.94
SDF2-204ENST00000587338 TIPINQ9BVW5 301 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 RAB34Q9BZG1 259 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 LINC00597Q9H2U6 94 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 CCDC86Q9H6F5 360 aaKnown RBP9.21□□□□□ -0.94
SDF2-204ENST00000587338 TMLHEQ9NVH6 421 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 UXTQ9UBK9 157 aaPredicted RBP9.21□□□□□ -0.94
SDF2-204ENST00000587338 PILRBQ9UKJ0 227 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 SLC6A14Q9UN76 642 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 STK24Q9Y6E0 443 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 OBSL1O75147 1896 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 DENND4CQ5VZ89 1909 aa9.21□□□□□ -0.94
SDF2-204ENST00000587338 NAV2Q8IVL1 2488 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 ANK1P16157 1881 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 TCRBV21S2A2A0A5A6 115 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 C2orf78A6NCI8 922 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 SGK1O00141 431 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 PIRO00625 290 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 OGTO15294 1046 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 FAM189A1O60320 539 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 CDC25AP30304 524 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 HOXD12P35452 270 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 TIE1P35590 1138 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 TAF6P49848 677 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 TSPY1Q01534 308 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 PDIA5Q14554 519 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 DUOXA1Q1HG43 343 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 MCTP1Q6DN14 999 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 SFTPA1Q8IWL2 248 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 DEFB119Q8N690 84 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 ARL14EPQ8N8R7 260 aaPredicted RBP9.2□□□□□ -0.94
SDF2-204ENST00000587338 PNPLA1Q8N8W4 532 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 CEP76Q8TAP6 659 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 LRIG1Q96JA1 1093 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 C8orf76Q96K31 380 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 CAMK1GQ96NX5 476 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 TSPAN18Q96SJ8 248 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 MSTO1Q9BUK6 570 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 POLMQ9NP87 494 aaPredicted RBP9.2□□□□□ -0.94
SDF2-204ENST00000587338 ZDHHC4Q9NPG8 344 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 KCNG1Q9UIX4 513 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 RAXQ9Y2V3 346 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 SCN1AP35498 2009 aa9.2□□□□□ -0.94
SDF2-204ENST00000587338 TNRC6BQ9UPQ9 1833 aaKnown RBP9.19□□□□□ -0.94
SDF2-204ENST00000587338 PTPRDP23468 1912 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 ZNF462Q96JM2 2506 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 ANO9A1A5B4 782 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 H0YCG3 227 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 AP5Z1O43299 807 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 SH3BP5O60239 455 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 NOL4O94818 638 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 SERPINF2P08697 491 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 FTH1P19P0C7X4 201 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 ZSCAN22P10073 491 aaPredicted RBP9.19□□□□□ -0.94
SDF2-204ENST00000587338 CD59P13987 128 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 CYP2F1P24903 491 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms