RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 FAM35AQ86V20 835 aa15.77■□□□□ 0.12
ATG4D-207ENST00000587256 UNC93AQ86WB7 457 aa15.77■□□□□ 0.12
ATG4D-207ENST00000587256 DEPDC1BQ8WUY9 529 aa15.77■□□□□ 0.12
ATG4D-207ENST00000587256 MRPS31Q92665 395 aaKnown RBP15.77■□□□□ 0.12
ATG4D-207ENST00000587256 SEMA4DQ92854 862 aa15.77■□□□□ 0.12
ATG4D-207ENST00000587256 TRMT2BQ96GJ1 504 aaKnown RBP15.77■□□□□ 0.12
ATG4D-207ENST00000587256 B3GNT5Q9BYG0 378 aa15.77■□□□□ 0.12
ATG4D-207ENST00000587256 PLA2G2FQ9BZM2 168 aa15.77■□□□□ 0.12
ATG4D-207ENST00000587256 DNAI2Q9GZS0 605 aa15.77■□□□□ 0.12
ATG4D-207ENST00000587256 TASP1Q9H6P5 420 aa15.77■□□□□ 0.12
ATG4D-207ENST00000587256 CYP3A43Q9HB55 503 aa15.77■□□□□ 0.12
ATG4D-207ENST00000587256 LMBRD1Q9NUN5 540 aa15.77■□□□□ 0.12
ATG4D-207ENST00000587256 RAB20Q9NX57 234 aa15.77■□□□□ 0.12
ATG4D-207ENST00000587256 PTPRDP23468 1912 aa15.76■□□□□ 0.11
ATG4D-207ENST00000587256 CLDN5O00501 218 aa15.76■□□□□ 0.11
ATG4D-207ENST00000587256 STK25O00506 426 aa15.76■□□□□ 0.11
ATG4D-207ENST00000587256 LRRN2O75325 713 aa15.76■□□□□ 0.11
ATG4D-207ENST00000587256 VCPP55072 806 aaKnown RBP15.76■□□□□ 0.11
ATG4D-207ENST00000587256 INCA1Q0VD86 236 aa15.76■□□□□ 0.11
ATG4D-207ENST00000587256 DENND5BQ6ZUT9 1274 aa15.76■□□□□ 0.11
ATG4D-207ENST00000587256 ARID3BQ8IVW6 561 aaPredicted RBP15.76■□□□□ 0.11
ATG4D-207ENST00000587256 YAF2Q8IY57 180 aa15.76■□□□□ 0.11
ATG4D-207ENST00000587256 E2F7Q96AV8 911 aa15.76■□□□□ 0.11
ATG4D-207ENST00000587256 SPATA17Q96L03 361 aa15.76■□□□□ 0.11
ATG4D-207ENST00000587256 C8orf48Q96LL4 319 aa15.76■□□□□ 0.11
ATG4D-207ENST00000587256 CEP295NLQ96MC4 621 aa15.76■□□□□ 0.11
ATG4D-207ENST00000587256 TRMT61BQ9BVS5 477 aaKnown RBP15.76■□□□□ 0.11
ATG4D-207ENST00000587256 BRD9Q9H8M2 597 aa15.76■□□□□ 0.11
ATG4D-207ENST00000587256 TRPV4Q9HBA0 871 aa15.76■□□□□ 0.11
ATG4D-207ENST00000587256 TRPC7Q9HCX4 862 aa15.76■□□□□ 0.11
ATG4D-207ENST00000587256 KRT82Q9NSB4 513 aa15.76■□□□□ 0.11
ATG4D-207ENST00000587256 FAM49BQ9NUQ9 324 aa15.76■□□□□ 0.11
ATG4D-207ENST00000587256 EHD2Q9NZN4 543 aa15.76■□□□□ 0.11
ATG4D-207ENST00000587256 ZMYM5Q9UJ78 669 aa15.76■□□□□ 0.11
ATG4D-207ENST00000587256 KRBA1A5PL33 1030 aa15.75■□□□□ 0.11
ATG4D-207ENST00000587256 HEPACAM2A8MVW5 462 aa15.75■□□□□ 0.11
ATG4D-207ENST00000587256 PRAMEF12O95522 483 aa15.75■□□□□ 0.11
ATG4D-207ENST00000587256 FGFR1OPO95684 399 aaKnown RBP15.75■□□□□ 0.11
ATG4D-207ENST00000587256 GNA14O95837 355 aa15.75■□□□□ 0.11
ATG4D-207ENST00000587256 F11P03951 625 aa15.75■□□□□ 0.11
ATG4D-207ENST00000587256 CCDC130P13994 396 aa15.75■□□□□ 0.11
ATG4D-207ENST00000587256 PSMC3P17980 439 aa15.75■□□□□ 0.11
ATG4D-207ENST00000587256 DDX6P26196 483 aaKnown RBP eCLIP15.75■□□□□ 0.11
ATG4D-207ENST00000587256 AVPR1AP37288 418 aa15.75■□□□□ 0.11
ATG4D-207ENST00000587256 FMO5P49326 533 aa15.75■□□□□ 0.11
ATG4D-207ENST00000587256 CACNA2D1P54289 1103 aa15.75■□□□□ 0.11
ATG4D-207ENST00000587256 IFRD2Q12894 506 aaPredicted RBP15.75■□□□□ 0.11
ATG4D-207ENST00000587256 VITQ6UXI7 678 aa15.75■□□□□ 0.11
ATG4D-207ENST00000587256 TMEM150AQ86TG1 271 aa15.75■□□□□ 0.11
ATG4D-207ENST00000587256 GPIHBP1Q8IV16 184 aa15.75■□□□□ 0.11
ATG4D-207ENST00000587256 SLC2A14Q8TDB8 520 aa15.75■□□□□ 0.11
ATG4D-207ENST00000587256 SMARCD1Q96GM5 515 aa15.75■□□□□ 0.11
ATG4D-207ENST00000587256 MYRFLQ96LU7 910 aa15.75■□□□□ 0.11
ATG4D-207ENST00000587256 TWNKQ96RR1 684 aa15.75■□□□□ 0.11
ATG4D-207ENST00000587256 NT5C1AQ9BXI3 368 aa15.75■□□□□ 0.11
ATG4D-207ENST00000587256 DMAP1Q9NPF5 467 aaPredicted RBP15.75■□□□□ 0.11
ATG4D-207ENST00000587256 RWDD2AQ9UIY3 292 aa15.75■□□□□ 0.11
ATG4D-207ENST00000587256 NUP210Q8TEM1 1887 aaPredicted RBP15.75■□□□□ 0.11
ATG4D-207ENST00000587256 ZNF318Q5VUA4 2279 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 NCANO14594 1321 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 CILPO75339 1184 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 TADA3O75528 432 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 AP1G2O75843 785 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 CCDC192P0DO97 292 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 ADORA2BP29275 332 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 GDI1P31150 447 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 CETN1Q12798 172 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 MLF2Q15773 248 aaPredicted RBP15.74■□□□□ 0.11
ATG4D-207ENST00000587256 CWF19L1Q69YN2 538 aaKnown RBP15.74■□□□□ 0.11
ATG4D-207ENST00000587256 TXNDC8Q6A555 127 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 ASTLQ6HA08 431 aaPredicted RBP15.74■□□□□ 0.11
ATG4D-207ENST00000587256 CMTM8Q8IZV2 173 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 TTC39CQ8N584 583 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 MAB21L3Q8N8X9 362 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 MLKLQ8NB16 471 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 DNASE1L2Q92874 299 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 RSPRY1Q96DX4 576 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 ARID3AQ99856 593 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 SRRTQ9BXP5 876 aaKnown RBP15.74■□□□□ 0.11
ATG4D-207ENST00000587256 SMG9Q9H0W8 520 aaKnown RBP15.74■□□□□ 0.11
ATG4D-207ENST00000587256 TBC1D17Q9HA65 648 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 TMEM30AQ9NV96 361 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 OBSL1O75147 1896 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 KMT2EQ8IZD2 1858 aa15.74■□□□□ 0.11
ATG4D-207ENST00000587256 ZNF263O14978 683 aa15.73■□□□□ 0.11
ATG4D-207ENST00000587256 CKMP06732 381 aa15.73■□□□□ 0.11
ATG4D-207ENST00000587256 AVPR2P30518 371 aa15.73■□□□□ 0.11
ATG4D-207ENST00000587256 USP46P62068 366 aa15.73■□□□□ 0.11
ATG4D-207ENST00000587256 TPD52L1Q16890 204 aaPredicted RBP15.73■□□□□ 0.11
ATG4D-207ENST00000587256 ZNF394Q53GI3 561 aa15.73■□□□□ 0.11
ATG4D-207ENST00000587256 MFSD6LQ8IWD5 586 aa15.73■□□□□ 0.11
ATG4D-207ENST00000587256 FUKQ8N0W3 1084 aa15.73■□□□□ 0.11
ATG4D-207ENST00000587256 CRYBG2Q8N1P7 616 aa15.73■□□□□ 0.11
ATG4D-207ENST00000587256 C12orf29Q8N999 325 aa15.73■□□□□ 0.11
ATG4D-207ENST00000587256 IRF7Q92985 503 aa15.73■□□□□ 0.11
ATG4D-207ENST00000587256 FAXDC2Q96IV6 333 aa15.73■□□□□ 0.11
ATG4D-207ENST00000587256 SHDQ96IW2 340 aa15.73■□□□□ 0.11
ATG4D-207ENST00000587256 SLC46A2Q9BY10 475 aa15.73■□□□□ 0.11
ATG4D-207ENST00000587256 CISHQ9NSE2 258 aa15.73■□□□□ 0.11
ATG4D-207ENST00000587256 DACH1Q9UI36 760 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms