RNA–Protein interactions for RNA: ENST00000587175.1

CACTIN-205, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 5

Gene CACTIN, Length 2,216 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-205ENST00000587175 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.79■■□□□ 1.08
CACTIN-205ENST00000587175 SNX3O60493 162 aa21.78■■□□□ 1.08
CACTIN-205ENST00000587175 MMP3P08254 477 aa21.78■■□□□ 1.08
CACTIN-205ENST00000587175 SMPD1P17405 629 aa21.78■■□□□ 1.08
CACTIN-205ENST00000587175 DGKDQ16760 1214 aa21.78■■□□□ 1.08
CACTIN-205ENST00000587175 DPH6Q7L8W6 267 aa21.78■■□□□ 1.08
CACTIN-205ENST00000587175 ZNF410Q86VK4 478 aa21.78■■□□□ 1.08
CACTIN-205ENST00000587175 FAM228AQ86W67 206 aa21.78■■□□□ 1.08
CACTIN-205ENST00000587175 HAUS1Q96CS2 278 aa21.78■■□□□ 1.08
CACTIN-205ENST00000587175 MAML3Q96JK9 1138 aa21.78■■□□□ 1.08
CACTIN-205ENST00000587175 TACO1Q9BSH4 297 aaKnown RBP21.78■■□□□ 1.08
CACTIN-205ENST00000587175 FOXP3Q9BZS1 431 aa21.78■■□□□ 1.08
CACTIN-205ENST00000587175 DRG1Q9Y295 367 aaKnown RBP21.78■■□□□ 1.08
CACTIN-205ENST00000587175 A0A1B0GUA9 196 aa21.78■■□□□ 1.08
CACTIN-205ENST00000587175 ERBB2P04626 1255 aa21.78■■□□□ 1.08
CACTIN-205ENST00000587175 ELF3P78545 371 aaPredicted RBP21.78■■□□□ 1.08
CACTIN-205ENST00000587175 PLCB3Q01970 1234 aa21.78■■□□□ 1.08
CACTIN-205ENST00000587175 WLSQ5T9L3 541 aa21.78■■□□□ 1.08
CACTIN-205ENST00000587175 HIBCHQ6NVY1 386 aaPredicted RBP21.78■■□□□ 1.08
CACTIN-205ENST00000587175 PRUNE1Q86TP1 453 aa21.78■■□□□ 1.08
CACTIN-205ENST00000587175 KIAA0319LQ8IZA0 1049 aa21.78■■□□□ 1.08
CACTIN-205ENST00000587175 TTC39CQ8N584 583 aa21.78■■□□□ 1.08
CACTIN-205ENST00000587175 ALLCQ8N6M5 410 aa21.78■■□□□ 1.08
CACTIN-205ENST00000587175 KIF12Q96FN5 646 aa21.78■■□□□ 1.08
CACTIN-205ENST00000587175 ABHD16BQ9H3Z7 469 aa21.78■■□□□ 1.08
CACTIN-205ENST00000587175 BARX2Q9UMQ3 279 aaPredicted RBP21.78■■□□□ 1.08
CACTIN-205ENST00000587175 TMEM120BA0PK00 339 aa21.77■■□□□ 1.08
CACTIN-205ENST00000587175 LRCH4O75427 683 aa21.77■■□□□ 1.08
CACTIN-205ENST00000587175 HMGCRP04035 888 aa21.77■■□□□ 1.08
CACTIN-205ENST00000587175 ARSEP51690 589 aa21.77■■□□□ 1.08
CACTIN-205ENST00000587175 VCPP55072 806 aaKnown RBP21.77■■□□□ 1.08
CACTIN-205ENST00000587175 SLC25A11Q02978 314 aaKnown RBP21.77■■□□□ 1.08
CACTIN-205ENST00000587175 SF3A3Q12874 501 aaKnown RBP eCLIP21.77■■□□□ 1.08
CACTIN-205ENST00000587175 GRB14Q14449 540 aa21.77■■□□□ 1.08
CACTIN-205ENST00000587175 SMTNL2Q2TAL5 461 aa21.77■■□□□ 1.08
CACTIN-205ENST00000587175 MAP1SQ66K74 1059 aaPredicted RBP21.77■■□□□ 1.08
CACTIN-205ENST00000587175 RPAINQ86UA6 219 aa21.77■■□□□ 1.08
CACTIN-205ENST00000587175 NINJ2Q9NZG7 142 aa21.77■■□□□ 1.08
CACTIN-205ENST00000587175 OAS1P00973 400 aaKnown RBP21.76■■□□□ 1.07
CACTIN-205ENST00000587175 ACVR2BQ13705 512 aa21.76■■□□□ 1.07
CACTIN-205ENST00000587175 MARCH8Q5T0T0 291 aa21.76■■□□□ 1.07
CACTIN-205ENST00000587175 APBB1IPQ7Z5R6 666 aaPredicted RBP21.76■■□□□ 1.07
CACTIN-205ENST00000587175 EMC1Q8N766 993 aa21.76■■□□□ 1.07
CACTIN-205ENST00000587175 CCDC63Q8NA47 563 aa21.76■■□□□ 1.07
CACTIN-205ENST00000587175 PWWP2AQ96N64 755 aa21.76■■□□□ 1.07
CACTIN-205ENST00000587175 TINF2Q9BSI4 451 aa21.76■■□□□ 1.07
CACTIN-205ENST00000587175 RALGAPA2Q2PPJ7 1873 aa21.76■■□□□ 1.07
CACTIN-205ENST00000587175 DNALI1O14645 258 aaPredicted RBP21.76■■□□□ 1.07
CACTIN-205ENST00000587175 TCEA3O75764 348 aa21.76■■□□□ 1.07
CACTIN-205ENST00000587175 LRRC14Q15048 493 aa21.76■■□□□ 1.07
CACTIN-205ENST00000587175 DCAF4L1Q3SXM0 396 aa21.76■■□□□ 1.07
CACTIN-205ENST00000587175 VSTM1Q6UX27 236 aa21.76■■□□□ 1.07
CACTIN-205ENST00000587175 ZCCHC9Q8N567 271 aaKnown RBP21.76■■□□□ 1.07
CACTIN-205ENST00000587175 USP15Q9Y4E8 981 aaPredicted RBP21.76■■□□□ 1.07
CACTIN-205ENST00000587175 CFAP73A6NFT4 308 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 RNF8O76064 485 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 STAU1O95793 577 aaKnown RBP21.75■■□□□ 1.07
CACTIN-205ENST00000587175 SLC8A1P32418 973 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 GRM5P41594 1212 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 GABRB2P47870 512 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 NDST1P52848 882 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 MYO1EQ12965 1108 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 GPS1Q13098 491 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 KCNT1Q5JUK3 1230 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 IQSEC1Q6DN90 963 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 PLEKHH3Q7Z736 793 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 MGARPQ8TDB4 240 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 CCDC77Q9BR77 488 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 FAM124BQ9H5Z6 455 aaPredicted RBP21.75■■□□□ 1.07
CACTIN-205ENST00000587175 GINS2Q9Y248 185 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 EFR3BQ9Y2G0 817 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 TCP11X1B4DZS4 312 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 SGK1O00141 431 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 NDC80O14777 642 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 ITGAVP06756 1048 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 GPD2P43304 727 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 DYNLT1P63172 113 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 INCA1Q0VD86 236 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 KIZQ2M2Z5 673 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 FAM102AQ5T9C2 384 aaPredicted RBP21.75■■□□□ 1.07
CACTIN-205ENST00000587175 UBA3Q8TBC4 463 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 NKD2Q969F2 451 aaPredicted RBP21.75■■□□□ 1.07
CACTIN-205ENST00000587175 MCRS1Q96EZ8 462 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 RBM15Q96T37 977 aaKnown RBP eCLIP21.75■■□□□ 1.077e-7■■■□□ 17.8
CACTIN-205ENST00000587175 PARK7Q99497 189 aaKnown RBP21.75■■□□□ 1.07
CACTIN-205ENST00000587175 ABCF3Q9NUQ8 709 aa21.75■■□□□ 1.07
CACTIN-205ENST00000587175 SCN1AP35498 2009 aa21.74■■□□□ 1.07
CACTIN-205ENST00000587175 RRN3P2A6NIE6 340 aa21.74■■□□□ 1.07
CACTIN-205ENST00000587175 NPTXRO95502 500 aa21.74■■□□□ 1.07
CACTIN-205ENST00000587175 HOXD8P13378 290 aaPredicted RBP21.74■■□□□ 1.07
CACTIN-205ENST00000587175 ACAP1Q15027 740 aa21.74■■□□□ 1.07
CACTIN-205ENST00000587175 OASLQ15646 514 aaKnown RBP21.74■■□□□ 1.07
CACTIN-205ENST00000587175 FAM133BQ5BKY9 247 aaKnown RBP21.74■■□□□ 1.07
CACTIN-205ENST00000587175 CEP57Q86XR8 500 aa21.74■■□□□ 1.07
CACTIN-205ENST00000587175 RELL1Q8IUW5 271 aa21.74■■□□□ 1.07
CACTIN-205ENST00000587175 GLIS1Q8NBF1 620 aa21.74■■□□□ 1.07
CACTIN-205ENST00000587175 TTC13Q8NBP0 860 aa21.74■■□□□ 1.07
CACTIN-205ENST00000587175 NT5C1AQ9BXI3 368 aa21.74■■□□□ 1.07
CACTIN-205ENST00000587175 MIS12Q9H081 205 aa21.74■■□□□ 1.07
CACTIN-205ENST00000587175 SETD4Q9NVD3 440 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms