RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 FKBP15Q5T1M5 1219 aa22.78■■□□□ 1.24
RETREG3-202ENST00000585726 OTOP3Q7RTS5 596 aa22.78■■□□□ 1.24
RETREG3-202ENST00000585726 UBR7Q8N806 425 aa22.78■■□□□ 1.24
RETREG3-202ENST00000585726 TDRD5Q8NAT2 981 aaKnown RBP22.78■■□□□ 1.24
RETREG3-202ENST00000585726 ACSF2Q96CM8 615 aaPredicted RBP22.78■■□□□ 1.24
RETREG3-202ENST00000585726 MYADMQ96S97 322 aa22.78■■□□□ 1.24
RETREG3-202ENST00000585726 LSM14BQ9BX40 385 aaKnown RBP22.78■■□□□ 1.24
RETREG3-202ENST00000585726 FAM124BQ9H5Z6 455 aaPredicted RBP22.78■■□□□ 1.24
RETREG3-202ENST00000585726 ZNF334Q9HCZ1 680 aaPredicted RBP22.78■■□□□ 1.24
RETREG3-202ENST00000585726 KRT82Q9NSB4 513 aa22.78■■□□□ 1.24
RETREG3-202ENST00000585726 APEX2Q9UBZ4 518 aa22.78■■□□□ 1.24
RETREG3-202ENST00000585726 TRIM66O15016 1216 aa22.77■■□□□ 1.24
RETREG3-202ENST00000585726 AP1G2O75843 785 aa22.77■■□□□ 1.24
RETREG3-202ENST00000585726 KRT5P13647 590 aa22.77■■□□□ 1.24
RETREG3-202ENST00000585726 CD19P15391 556 aa22.77■■□□□ 1.24
RETREG3-202ENST00000585726 CCR2P41597 374 aa22.77■■□□□ 1.24
RETREG3-202ENST00000585726 MFAP3P55082 362 aa22.77■■□□□ 1.24
RETREG3-202ENST00000585726 PPP1R26Q5T8A7 1209 aaPredicted RBP22.77■■□□□ 1.24
RETREG3-202ENST00000585726 GJD3Q8N144 294 aa22.77■■□□□ 1.24
RETREG3-202ENST00000585726 SMARCD1Q96GM5 515 aa22.77■■□□□ 1.24
RETREG3-202ENST00000585726 KCNK16Q96T55 309 aa22.77■■□□□ 1.24
RETREG3-202ENST00000585726 SIX2Q9NPC8 291 aa22.77■■□□□ 1.24
RETREG3-202ENST00000585726 TMEM30AQ9NV96 361 aa22.77■■□□□ 1.24
RETREG3-202ENST00000585726 LOC730098B7Z3J9 87 aa22.76■■□□□ 1.23
RETREG3-202ENST00000585726 NRG2O14511 850 aaPredicted RBP22.76■■□□□ 1.23
RETREG3-202ENST00000585726 ZNF197O14709 1029 aa22.76■■□□□ 1.23
RETREG3-202ENST00000585726 CALCAP01258 141 aa22.76■■□□□ 1.23
RETREG3-202ENST00000585726 CSH1P0DML2 217 aa22.76■■□□□ 1.23
RETREG3-202ENST00000585726 CSH2P0DML3 217 aa22.76■■□□□ 1.23
RETREG3-202ENST00000585726 CEBPBP17676 345 aa22.76■■□□□ 1.23
RETREG3-202ENST00000585726 TPM4P67936 248 aa22.76■■□□□ 1.23
RETREG3-202ENST00000585726 PRSS36Q5K4E3 855 aa22.76■■□□□ 1.23
RETREG3-202ENST00000585726 TMC8Q8IU68 726 aa22.76■■□□□ 1.23
RETREG3-202ENST00000585726 RBBP8NLQ8NC74 664 aaPredicted RBP22.76■■□□□ 1.23
RETREG3-202ENST00000585726 ST13P5Q8NFI4 369 aaPredicted RBP22.76■■□□□ 1.23
RETREG3-202ENST00000585726 HNRNPABQ99729 332 aaKnown RBP22.76■■□□□ 1.23
RETREG3-202ENST00000585726 LRRC3Q9BY71 257 aa22.76■■□□□ 1.23
RETREG3-202ENST00000585726 TSPY26PQ9H489 355 aa22.76■■□□□ 1.23
RETREG3-202ENST00000585726 CD320Q9NPF0 282 aa22.76■■□□□ 1.23
RETREG3-202ENST00000585726 DNAJC12Q9UKB3 198 aa22.76■■□□□ 1.23
RETREG3-202ENST00000585726 USTQ9Y2C2 406 aa22.76■■□□□ 1.23
RETREG3-202ENST00000585726 A0A1W2PRU2 124 aa22.75■■□□□ 1.23
RETREG3-202ENST00000585726 C19orf67A6NJJ6 358 aa22.75■■□□□ 1.23
RETREG3-202ENST00000585726 RNF225M0QZC1 329 aaPredicted RBP22.75■■□□□ 1.23
RETREG3-202ENST00000585726 BEST1O76090 585 aa22.75■■□□□ 1.23
RETREG3-202ENST00000585726 CAVIN2O95810 425 aa22.75■■□□□ 1.23
RETREG3-202ENST00000585726 GABRR2P28476 465 aa22.75■■□□□ 1.23
RETREG3-202ENST00000585726 USP8P40818 1118 aa22.75■■□□□ 1.23
RETREG3-202ENST00000585726 KLK7P49862 253 aa22.75■■□□□ 1.23
RETREG3-202ENST00000585726 MAP3K7CLP57077 242 aa22.75■■□□□ 1.23
RETREG3-202ENST00000585726 UBXN1Q04323 297 aa22.75■■□□□ 1.23
RETREG3-202ENST00000585726 IFRD2Q12894 506 aaPredicted RBP22.75■■□□□ 1.23
RETREG3-202ENST00000585726 LRSAM1Q6UWE0 723 aa22.75■■□□□ 1.23
RETREG3-202ENST00000585726 LEMD2Q8NC56 503 aa22.75■■□□□ 1.23
RETREG3-202ENST00000585726 FGF13Q92913 245 aa22.75■■□□□ 1.23
RETREG3-202ENST00000585726 JAKMIP2Q96AA8 810 aa22.75■■□□□ 1.23
RETREG3-202ENST00000585726 MCRS1Q96EZ8 462 aa22.75■■□□□ 1.23
RETREG3-202ENST00000585726 C8orf48Q96LL4 319 aa22.75■■□□□ 1.23
RETREG3-202ENST00000585726 PCMTD1Q96MG8 357 aaPredicted RBP22.75■■□□□ 1.23
RETREG3-202ENST00000585726 ATXN3LQ9H3M9 355 aa22.75■■□□□ 1.23
RETREG3-202ENST00000585726 AVENQ9NQS1 362 aaPredicted RBP22.75■■□□□ 1.23
RETREG3-202ENST00000585726 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.75■■□□□ 1.23
RETREG3-202ENST00000585726 AJAP1Q9UKB5 411 aaPredicted RBP22.75■■□□□ 1.23
RETREG3-202ENST00000585726 LGALS16A8MUM7 142 aa22.74■■□□□ 1.23
RETREG3-202ENST00000585726 GOLGA6L19H0YKK7 550 aa22.74■■□□□ 1.23
RETREG3-202ENST00000585726 FAM200BP0CF97 657 aa22.74■■□□□ 1.23
RETREG3-202ENST00000585726 HMGA1P17096 107 aaKnown RBP22.74■■□□□ 1.23
RETREG3-202ENST00000585726 EPHA5P54756 1037 aa22.74■■□□□ 1.23
RETREG3-202ENST00000585726 TEAD2Q15562 447 aa22.74■■□□□ 1.23
RETREG3-202ENST00000585726 SGO2Q562F6 1265 aa22.74■■□□□ 1.23
RETREG3-202ENST00000585726 DENND5BQ6ZUT9 1274 aa22.74■■□□□ 1.23
RETREG3-202ENST00000585726 ENOSF1Q7L5Y1 443 aa22.74■■□□□ 1.23
RETREG3-202ENST00000585726 APTXQ7Z2E3 356 aaKnown RBP22.74■■□□□ 1.23
RETREG3-202ENST00000585726 SHKBP1Q8TBC3 707 aa22.74■■□□□ 1.23
RETREG3-202ENST00000585726 SPATA17Q96L03 361 aa22.74■■□□□ 1.23
RETREG3-202ENST00000585726 FAM81BQ96LP2 452 aa22.74■■□□□ 1.23
RETREG3-202ENST00000585726 SMOQ99835 787 aa22.74■■□□□ 1.23
RETREG3-202ENST00000585726 COL25A1Q9BXS0 654 aaPredicted RBP22.74■■□□□ 1.23
RETREG3-202ENST00000585726 DMAP1Q9NPF5 467 aaPredicted RBP22.74■■□□□ 1.23
RETREG3-202ENST00000585726 LIMD1Q9UGP4 676 aa22.74■■□□□ 1.23
RETREG3-202ENST00000585726 CDH7Q9ULB5 785 aa22.74■■□□□ 1.23
RETREG3-202ENST00000585726 C5orf42Q9H799 3197 aa22.74■■□□□ 1.23
RETREG3-202ENST00000585726 DENND4AQ7Z401 1863 aa22.73■■□□□ 1.23
RETREG3-202ENST00000585726 LRRC10BA6NIK2 292 aa22.73■■□□□ 1.23
RETREG3-202ENST00000585726 MOSPD3O75425 235 aa22.73■■□□□ 1.23
RETREG3-202ENST00000585726 NOL4O94818 638 aa22.73■■□□□ 1.23
RETREG3-202ENST00000585726 KLHDC7AQ5VTJ3 777 aa22.73■■□□□ 1.23
RETREG3-202ENST00000585726 GAREM2Q75VX8 874 aa22.73■■□□□ 1.23
RETREG3-202ENST00000585726 NPAS3Q8IXF0 933 aa22.73■■□□□ 1.23
RETREG3-202ENST00000585726 PLCD3Q8N3E9 789 aa22.73■■□□□ 1.23
RETREG3-202ENST00000585726 GCNAQ96QF7 691 aa22.73■■□□□ 1.23
RETREG3-202ENST00000585726 DOCK6Q96HP0 2047 aa22.73■■□□□ 1.23
RETREG3-202ENST00000585726 SERPINC1P01008 464 aa22.72■■□□□ 1.23
RETREG3-202ENST00000585726 PAEPP09466 180 aa22.72■■□□□ 1.23
RETREG3-202ENST00000585726 VDRP11473 427 aa22.72■■□□□ 1.23
RETREG3-202ENST00000585726 LAMP2P13473 410 aa22.72■■□□□ 1.23
RETREG3-202ENST00000585726 USP46P62068 366 aa22.72■■□□□ 1.23
RETREG3-202ENST00000585726 CYP4F8P98187 520 aa22.72■■□□□ 1.23
RETREG3-202ENST00000585726 RAPGEF1Q13905 1077 aa22.72■■□□□ 1.23
RETREG3-202ENST00000585726 SYCP1Q15431 976 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms