RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 USP34Q70CQ2 3546 aa9.21□□□□□ -0.94
ATG4D-202ENST00000585437 SOBPA7XYQ1 873 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 SMTNL1A8MU46 457 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 TULP1O00294 542 aaPredicted RBP9.2□□□□□ -0.94
ATG4D-202ENST00000585437 ARNTLO00327 626 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 CETN3O15182 167 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 LRRN2O75325 713 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 F11P03951 625 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 CFHP08603 1231 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 CSH1P0DML2 217 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 CSH2P0DML3 217 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 EPB41P11171 864 aaKnown RBP9.2□□□□□ -0.94
ATG4D-202ENST00000585437 PTPN1P18031 435 aaKnown RBP9.2□□□□□ -0.94
ATG4D-202ENST00000585437 CDC25CP30307 473 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 GNL1P36915 607 aaPredicted RBP9.2□□□□□ -0.94
ATG4D-202ENST00000585437 RAP1GAPP47736 663 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 GCLMP48507 274 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 MXI1P50539 228 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 CDR1P51861 262 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 CDH8P55286 799 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 MARSP56192 900 aaKnown RBP9.2□□□□□ -0.94
ATG4D-202ENST00000585437 GPC5P78333 572 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 FCHO2Q0JRZ9 810 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 STIM1Q13586 685 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 MDH1BQ5I0G3 518 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 KRT39Q6A163 491 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 SPOPLQ6IQ16 392 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 VITQ6UXI7 678 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 SUGP1Q8IWZ8 645 aaKnown RBP9.2□□□□□ -0.94
ATG4D-202ENST00000585437 STKLD1Q8NE28 680 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 ST13P5Q8NFI4 369 aaPredicted RBP9.2□□□□□ -0.94
ATG4D-202ENST00000585437 ZSCAN18Q8TBC5 510 aaPredicted RBP9.2□□□□□ -0.94
ATG4D-202ENST00000585437 GIPC2Q8TF65 315 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 DEPDC1BQ8WUY9 529 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 DNASE1L2Q92874 299 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 SLC35C1Q96A29 364 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 ELMO3Q96BJ8 720 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 RSPRY1Q96DX4 576 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 SPATA17Q96L03 361 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 C8orf48Q96LL4 319 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 CEP63Q96MT8 703 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 TSG101Q99816 390 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 DDX23Q9BUQ8 820 aaKnown RBP9.2□□□□□ -0.94
ATG4D-202ENST00000585437 TTLL2Q9BWV7 592 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 ELOVL4Q9GZR5 314 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 NIF3L1Q9GZT8 377 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 SNX25Q9H3E2 840 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 FAM124BQ9H5Z6 455 aaPredicted RBP9.2□□□□□ -0.94
ATG4D-202ENST00000585437 APOBEC3GQ9HC16 384 aaKnown RBP9.2□□□□□ -0.94
ATG4D-202ENST00000585437 TRPV5Q9NQA5 729 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 ARHGEF3Q9NR81 526 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 HMGXB4Q9UGU5 601 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 ZMYM5Q9UJ78 669 aa9.2□□□□□ -0.94
ATG4D-202ENST00000585437 SHISA7A6NL88 538 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 SLC38A8A6NNN8 435 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 A8MXQ7 604 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 PMM2O15305 246 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 ZNF500O60304 480 aaPredicted RBP9.19□□□□□ -0.94
ATG4D-202ENST00000585437 PRAMEF12O95522 483 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 PDGFRBP09619 1106 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 P4HA1P13674 534 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 AOC1P19801 751 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 BDNFP23560 247 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 AVPR2P30518 371 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 CLCN5P51795 746 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 NUBP1P53384 320 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 CACNA2D1P54289 1103 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 STARD6P59095 220 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 CYP4F8P98187 520 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 IQCB1Q15051 598 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 DDR2Q16832 855 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 CBWD6Q4V339 395 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 CT47A1Q5JQC4 288 aaPredicted RBP9.19□□□□□ -0.94
ATG4D-202ENST00000585437 CBWD3Q5JTY5 395 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 CBWD5Q5RIA9 395 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 IER5LQ5T953 404 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 SDHAF4Q5VUM1 108 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 ASTLQ6HA08 431 aaPredicted RBP9.19□□□□□ -0.94
ATG4D-202ENST00000585437 PHLDB3Q6NSJ2 640 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 SCARA5Q6ZMJ2 495 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 C11orf57Q6ZUT1 292 aaPredicted RBP9.19□□□□□ -0.94
ATG4D-202ENST00000585437 PAQR9Q6ZVX9 377 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 UNC93AQ86WB7 457 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 MFSD6LQ8IWD5 586 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 SIX5Q8N196 739 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 CRYBG2Q8N1P7 616 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 TMEM105Q8N8V8 129 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 FBXL13Q8NEE6 735 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 OR6B3Q8NGW1 331 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 SEMA4DQ92854 862 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 E2F7Q96AV8 911 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 MRFAP1L1Q96HT8 127 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 TNIP3Q96KP6 325 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 B3GNT5Q9BYG0 378 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 IMPG2Q9BZV3 1241 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 TRIM5Q9C035 493 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 ZNF518BQ9C0D4 1074 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 TASP1Q9H6P5 420 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 CYP3A43Q9HB55 503 aa9.19□□□□□ -0.94
ATG4D-202ENST00000585437 ZFP14Q9HCL3 533 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms