RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 ZNF77Q15935 545 aa16.07■□□□□ 0.16
VAPA-209ENST00000585042 TRIM68Q6AZZ1 485 aa16.07■□□□□ 0.16
VAPA-209ENST00000585042 FAM173BQ6P4H8 233 aa16.07■□□□□ 0.16
VAPA-209ENST00000585042 WDR49Q8IV35 697 aa16.07■□□□□ 0.16
VAPA-209ENST00000585042 USP28Q96RU2 1077 aa16.07■□□□□ 0.16
VAPA-209ENST00000585042 DUS2Q9NX74 493 aaKnown RBP16.07■□□□□ 0.16
VAPA-209ENST00000585042 GCNT4Q9P109 453 aa16.07■□□□□ 0.16
VAPA-209ENST00000585042 PCDHGA5Q9Y5G8 931 aa16.07■□□□□ 0.16
VAPA-209ENST00000585042 OBSL1O75147 1896 aa16.07■□□□□ 0.16
VAPA-209ENST00000585042 A0A087X0B3 334 aa16.06■□□□□ 0.16
VAPA-209ENST00000585042 TULP1O00294 542 aaPredicted RBP16.06■□□□□ 0.16
VAPA-209ENST00000585042 PPP6R2O75170 966 aa16.06■□□□□ 0.16
VAPA-209ENST00000585042 EGFP01133 1207 aa16.06■□□□□ 0.16
VAPA-209ENST00000585042 ADRB1P08588 477 aa16.06■□□□□ 0.16
VAPA-209ENST00000585042 ARSAP15289 507 aa16.06■□□□□ 0.16
VAPA-209ENST00000585042 HDCP19113 662 aa16.06■□□□□ 0.16
VAPA-209ENST00000585042 WARSP23381 471 aaKnown RBP16.06■□□□□ 0.16
VAPA-209ENST00000585042 SDHAF4Q5VUM1 108 aa16.06■□□□□ 0.16
VAPA-209ENST00000585042 SYT13Q7L8C5 426 aa16.06■□□□□ 0.16
VAPA-209ENST00000585042 OSTM1Q86WC4 334 aa16.06■□□□□ 0.16
VAPA-209ENST00000585042 SCN4BQ8IWT1 228 aa16.06■□□□□ 0.16
VAPA-209ENST00000585042 LINC00301Q8NCQ3 95 aa16.06■□□□□ 0.16
VAPA-209ENST00000585042 ZNF507Q8TCN5 953 aa16.06■□□□□ 0.16
VAPA-209ENST00000585042 CYP2S1Q96SQ9 504 aa16.06■□□□□ 0.16
VAPA-209ENST00000585042 FGFBP2Q9BYJ0 223 aa16.06■□□□□ 0.16
VAPA-209ENST00000585042 FBRSL1Q9HCM7 1045 aaKnown RBP16.06■□□□□ 0.16
VAPA-209ENST00000585042 EBF1Q9UH73 591 aa16.06■□□□□ 0.16
VAPA-209ENST00000585042 ARHGAP26Q9UNA1 814 aa16.06■□□□□ 0.16
VAPA-209ENST00000585042 MTMR6Q9Y217 621 aa16.06■□□□□ 0.16
VAPA-209ENST00000585042 RNF40O75150 1001 aa16.05■□□□□ 0.16
VAPA-209ENST00000585042 TACC1O75410 805 aa16.05■□□□□ 0.16
VAPA-209ENST00000585042 EPN2O95208 641 aa16.05■□□□□ 0.16
VAPA-209ENST00000585042 CKMP06732 381 aa16.05■□□□□ 0.16
VAPA-209ENST00000585042 PDIA4P13667 645 aaKnown RBP16.05■□□□□ 0.16
VAPA-209ENST00000585042 IFNAR2P48551 515 aa16.05■□□□□ 0.16
VAPA-209ENST00000585042 USP4Q13107 963 aa16.05■□□□□ 0.16
VAPA-209ENST00000585042 EML3Q32P44 896 aa16.05■□□□□ 0.16
VAPA-209ENST00000585042 SCARA3Q6AZY7 606 aa16.05■□□□□ 0.16
VAPA-209ENST00000585042 PKN3Q6P5Z2 889 aa16.05■□□□□ 0.16
VAPA-209ENST00000585042 PDILTQ8N807 584 aa16.05■□□□□ 0.16
VAPA-209ENST00000585042 OR5B17Q8NGF7 314 aa16.05■□□□□ 0.16
VAPA-209ENST00000585042 RIN3Q8TB24 985 aa16.05■□□□□ 0.16
VAPA-209ENST00000585042 NOC3LQ8WTT2 800 aaKnown RBP16.05■□□□□ 0.16
VAPA-209ENST00000585042 KBTBD7Q8WVZ9 684 aa16.05■□□□□ 0.16
VAPA-209ENST00000585042 CD101Q93033 1021 aa16.05■□□□□ 0.16
VAPA-209ENST00000585042 ACDQ96AP0 544 aa16.05■□□□□ 0.16
VAPA-209ENST00000585042 SYT15Q9BQS2 421 aa16.05■□□□□ 0.16
VAPA-209ENST00000585042 TRIM9Q9C026 710 aa16.05■□□□□ 0.16
VAPA-209ENST00000585042 TRPC7Q9HCX4 862 aa16.05■□□□□ 0.16
VAPA-209ENST00000585042 HSPBP1Q9NZL4 362 aa16.05■□□□□ 0.16
VAPA-209ENST00000585042 TRIM66O15016 1216 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 AXIN1O15169 862 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 SPTLC2O15270 562 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 STX6O43752 255 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 CCDC192P0DO97 292 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 LMO2P25791 158 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 GRIK1P39086 918 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 NOP14P78316 857 aaKnown RBP16.04■□□□□ 0.16
VAPA-209ENST00000585042 KCNB1Q14721 858 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 STK38Q15208 465 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 E2F4Q16254 413 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 PPM1JQ5JR12 505 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 DENND5BQ6ZUT9 1274 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 EPM2AIP1Q7L775 607 aaPredicted RBP16.04■□□□□ 0.16
VAPA-209ENST00000585042 TRAPPC11Q7Z392 1133 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 ARL14EPQ8N8R7 260 aaPredicted RBP16.04■□□□□ 0.16
VAPA-209ENST00000585042 IQUBQ8NA54 791 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 MYCBPAPQ8TBZ2 947 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 SH3RF2Q8TEC5 729 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 ZNF396Q96N95 335 aaPredicted RBP16.04■□□□□ 0.16
VAPA-209ENST00000585042 SLC22A12Q96S37 553 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 TTLL2Q9BWV7 592 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 ARRDC1-AS1Q9H2J1 176 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 TRPM5Q9NZQ8 1165 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 CGNQ9P2M7 1197 aaKnown RBP16.04■□□□□ 0.16
VAPA-209ENST00000585042 ANAPC1Q9H1A4 1944 aa16.04■□□□□ 0.16
VAPA-209ENST00000585042 PTPRJQ12913 1337 aa16.03■□□□□ 0.16
VAPA-209ENST00000585042 ATP2C2O75185 946 aa16.03■□□□□ 0.16
VAPA-209ENST00000585042 NFATC1O95644 943 aa16.03■□□□□ 0.16
VAPA-209ENST00000585042 STAU1O95793 577 aaKnown RBP16.03■□□□□ 0.16
VAPA-209ENST00000585042 ANXA13P27216 316 aa16.03■□□□□ 0.16
VAPA-209ENST00000585042 HOXD13P35453 343 aa16.03■□□□□ 0.16
VAPA-209ENST00000585042 GNL1P36915 607 aaPredicted RBP16.03■□□□□ 0.16
VAPA-209ENST00000585042 PLA2G2CQ5R387 149 aa16.03■□□□□ 0.16
VAPA-209ENST00000585042 KBTBD6Q86V97 674 aa16.03■□□□□ 0.16
VAPA-209ENST00000585042 CBWD2Q8IUF1 395 aa16.03■□□□□ 0.16
VAPA-209ENST00000585042 C12orf50Q8NA57 414 aaPredicted RBP16.03■□□□□ 0.16
VAPA-209ENST00000585042 STKLD1Q8NE28 680 aa16.03■□□□□ 0.16
VAPA-209ENST00000585042 C8orf48Q96LL4 319 aa16.03■□□□□ 0.16
VAPA-209ENST00000585042 CNTNAP3BQ96NU0 1288 aa16.03■□□□□ 0.16
VAPA-209ENST00000585042 MMS19Q96T76 1030 aa16.03■□□□□ 0.16
VAPA-209ENST00000585042 C7orf25Q9BPX7 421 aa16.03■□□□□ 0.16
VAPA-209ENST00000585042 CNTNAP3Q9BZ76 1288 aa16.03■□□□□ 0.16
VAPA-209ENST00000585042 MAGEF1Q9HAY2 307 aa16.03■□□□□ 0.16
VAPA-209ENST00000585042 CRTAC1Q9NQ79 661 aa16.03■□□□□ 0.16
VAPA-209ENST00000585042 GREB1Q4ZG55 1949 aa16.03■□□□□ 0.16
VAPA-209ENST00000585042 SPAG17Q6Q759 2223 aa16.03■□□□□ 0.16
VAPA-209ENST00000585042 UBE4BO95155 1302 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 C2orf78A6NCI8 922 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 SLC9A3R1O14745 358 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms