RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 KIF26AQ9ULI4 1882 aaPredicted RBP22.13■■□□□ 1.13
TOP3A-218ENST00000584669 A8MXQ7 604 aa22.13■■□□□ 1.13
TOP3A-218ENST00000584669 SLC16A3O15427 465 aaKnown RBP22.13■■□□□ 1.13
TOP3A-218ENST00000584669 SP9P0CG40 484 aa22.13■■□□□ 1.13
TOP3A-218ENST00000584669 PTPN1P18031 435 aaKnown RBP22.13■■□□□ 1.13
TOP3A-218ENST00000584669 GABRR2P28476 465 aa22.13■■□□□ 1.13
TOP3A-218ENST00000584669 PPP1R2P41236 205 aa22.13■■□□□ 1.13
TOP3A-218ENST00000584669 CYP27A1Q02318 531 aa22.13■■□□□ 1.13
TOP3A-218ENST00000584669 CFAP221Q4G0U5 840 aa22.13■■□□□ 1.13
TOP3A-218ENST00000584669 TTI2Q6NXR4 508 aa22.13■■□□□ 1.13
TOP3A-218ENST00000584669 SCN4BQ8IWT1 228 aa22.13■■□□□ 1.13
TOP3A-218ENST00000584669 TAF4BQ92750 862 aa22.13■■□□□ 1.13
TOP3A-218ENST00000584669 SMARCD2Q92925 531 aa22.13■■□□□ 1.13
TOP3A-218ENST00000584669 PCED1BQ96HM7 432 aa22.13■■□□□ 1.13
TOP3A-218ENST00000584669 FUBP3Q96I24 572 aaKnown RBP eCLIP22.13■■□□□ 1.13
TOP3A-218ENST00000584669 TRMT61BQ9BVS5 477 aaKnown RBP22.13■■□□□ 1.13
TOP3A-218ENST00000584669 IL21Q9HBE4 155 aa22.13■■□□□ 1.13
TOP3A-218ENST00000584669 KIAA1468Q9P260 1216 aa22.13■■□□□ 1.13
TOP3A-218ENST00000584669 MAGEC2Q9UBF1 373 aaPredicted RBP22.13■■□□□ 1.13
TOP3A-218ENST00000584669 F5P12259 2224 aa22.12■■□□□ 1.13
TOP3A-218ENST00000584669 HELZP42694 1942 aaKnown RBP22.12■■□□□ 1.13
TOP3A-218ENST00000584669 HMGA1P17096 107 aaKnown RBP22.12■■□□□ 1.13
TOP3A-218ENST00000584669 BDNFP23560 247 aa22.12■■□□□ 1.13
TOP3A-218ENST00000584669 VIPR2P41587 438 aa22.12■■□□□ 1.13
TOP3A-218ENST00000584669 MAPRE1Q15691 268 aaKnown RBP22.12■■□□□ 1.13
TOP3A-218ENST00000584669 TAF12Q16514 161 aa22.12■■□□□ 1.13
TOP3A-218ENST00000584669 DCAF17Q5H9S7 520 aaPredicted RBP22.12■■□□□ 1.13
TOP3A-218ENST00000584669 TCERG1LQ5VWI1 586 aa22.12■■□□□ 1.13
TOP3A-218ENST00000584669 ZC3H14Q6PJT7 736 aaKnown RBP22.12■■□□□ 1.13
TOP3A-218ENST00000584669 C4orf50Q6ZRC1 276 aa22.12■■□□□ 1.13
TOP3A-218ENST00000584669 ZSCAN18Q8TBC5 510 aaPredicted RBP22.12■■□□□ 1.13
TOP3A-218ENST00000584669 MYCBPAPQ8TBZ2 947 aa22.12■■□□□ 1.13
TOP3A-218ENST00000584669 SEMA4DQ92854 862 aa22.12■■□□□ 1.13
TOP3A-218ENST00000584669 ATXN3LQ9H3M9 355 aa22.12■■□□□ 1.13
TOP3A-218ENST00000584669 APOBEC3GQ9HC16 384 aaKnown RBP22.12■■□□□ 1.13
TOP3A-218ENST00000584669 PATJQ8NI35 1801 aa22.12■■□□□ 1.13
TOP3A-218ENST00000584669 LAMTOR5O43504 91 aa22.11■■□□□ 1.13
TOP3A-218ENST00000584669 P4HA1P13674 534 aa22.11■■□□□ 1.13
TOP3A-218ENST00000584669 TARSP26639 723 aaKnown RBP22.11■■□□□ 1.13
TOP3A-218ENST00000584669 GDI1P31150 447 aa22.11■■□□□ 1.13
TOP3A-218ENST00000584669 GTF2H1P32780 548 aa22.11■■□□□ 1.13
TOP3A-218ENST00000584669 MAGEA11P43364 429 aa22.11■■□□□ 1.13
TOP3A-218ENST00000584669 ASPAP45381 313 aa22.11■■□□□ 1.13
TOP3A-218ENST00000584669 STX17P56962 302 aa22.11■■□□□ 1.13
TOP3A-218ENST00000584669 RPL10AP62906 217 aaKnown RBP22.11■■□□□ 1.13
TOP3A-218ENST00000584669 NOP14P78316 857 aaKnown RBP22.11■■□□□ 1.13
TOP3A-218ENST00000584669 CYP4F8P98187 520 aa22.11■■□□□ 1.13
TOP3A-218ENST00000584669 KRT39Q6A163 491 aa22.11■■□□□ 1.13
TOP3A-218ENST00000584669 ZNF852Q6ZMS4 543 aa22.11■■□□□ 1.13
TOP3A-218ENST00000584669 B3GALNT2Q8NCR0 500 aa22.11■■□□□ 1.13
TOP3A-218ENST00000584669 LMBRD1Q9NUN5 540 aa22.11■■□□□ 1.13
TOP3A-218ENST00000584669 NDRG2Q9UN36 371 aaKnown RBP22.11■■□□□ 1.13
TOP3A-218ENST00000584669 MAGED2Q9UNF1 606 aaPredicted RBP22.11■■□□□ 1.13
TOP3A-218ENST00000584669 COL4A2P08572 1712 aa22.11■■□□□ 1.13
TOP3A-218ENST00000584669 SPTBN4Q9H254 2564 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 SLC38A8A6NNN8 435 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 CLDN5O00501 218 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 FGF19O95750 216 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 LMNAP02545 664 aaKnown RBP22.1■■□□□ 1.13
TOP3A-218ENST00000584669 MXI1P50539 228 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 ORC1Q13415 861 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 CBWD6Q4V339 395 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 CBWD3Q5JTY5 395 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 CBWD5Q5RIA9 395 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 VITQ6UXI7 678 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 TMEM150AQ86TG1 271 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 GPIHBP1Q8IV16 184 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 TRIML1Q8N9V2 468 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 DNASE1L2Q92874 299 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 CEP63Q96MT8 703 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 B3GNT5Q9BYG0 378 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 OSBPL6Q9BZF3 934 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 IMPG2Q9BZV3 1241 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 CLSTN2Q9H4D0 955 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 HMGXB4Q9UGU5 601 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 ARMCX3Q9UH62 379 aaPredicted RBP22.1■■□□□ 1.13
TOP3A-218ENST00000584669 MRPS17Q9Y2R5 130 aaKnown RBP22.1■■□□□ 1.13
TOP3A-218ENST00000584669 MYO16Q9Y6X6 1858 aa22.1■■□□□ 1.13
TOP3A-218ENST00000584669 NCANO14594 1321 aa22.09■■□□□ 1.13
TOP3A-218ENST00000584669 STX10O60499 249 aa22.09■■□□□ 1.13
TOP3A-218ENST00000584669 CSH1P0DML2 217 aa22.09■■□□□ 1.13
TOP3A-218ENST00000584669 CSH2P0DML3 217 aa22.09■■□□□ 1.13
TOP3A-218ENST00000584669 PSMC3P17980 439 aa22.09■■□□□ 1.13
TOP3A-218ENST00000584669 NDST1P52848 882 aa22.09■■□□□ 1.13
TOP3A-218ENST00000584669 CACNA2D1P54289 1103 aa22.09■■□□□ 1.13
TOP3A-218ENST00000584669 PAK1Q13153 545 aa22.09■■□□□ 1.13
TOP3A-218ENST00000584669 GPR158Q5T848 1215 aa22.09■■□□□ 1.13
TOP3A-218ENST00000584669 ACOT1Q86TX2 421 aa22.09■■□□□ 1.13
TOP3A-218ENST00000584669 IRF7Q92985 503 aa22.09■■□□□ 1.13
TOP3A-218ENST00000584669 NELL2Q99435 816 aa22.09■■□□□ 1.13
TOP3A-218ENST00000584669 HINFPQ9BQA5 517 aa22.09■■□□□ 1.13
TOP3A-218ENST00000584669 ZNF518BQ9C0D4 1074 aa22.09■■□□□ 1.13
TOP3A-218ENST00000584669 SEMA4AQ9H3S1 761 aa22.09■■□□□ 1.13
TOP3A-218ENST00000584669 TMEM30AQ9NV96 361 aa22.09■■□□□ 1.13
TOP3A-218ENST00000584669 BICDL2A1A5D9 508 aa22.08■■□□□ 1.13
TOP3A-218ENST00000584669 NCAM2O15394 837 aa22.08■■□□□ 1.13
TOP3A-218ENST00000584669 NOL4O94818 638 aa22.08■■□□□ 1.13
TOP3A-218ENST00000584669 F11P03951 625 aa22.08■■□□□ 1.13
TOP3A-218ENST00000584669 CDC25CP30307 473 aa22.08■■□□□ 1.13
TOP3A-218ENST00000584669 GRIK1P39086 918 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms