RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 SHISA7A6NL88 538 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 SLC38A8A6NNN8 435 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 A8MXQ7 604 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 PROB1E7EW31 1015 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 TULP1O00294 542 aaPredicted RBP10.55□□□□□ -0.72
SKA2-208ENST00000583927 MAN2B1O00754 1011 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 CETN3O15182 167 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 SLC16A3O15427 465 aaKnown RBP10.55□□□□□ -0.72
SKA2-208ENST00000583927 HCRTO43612 131 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 STX10O60499 249 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 KINO60870 393 aaKnown RBP10.55□□□□□ -0.72
SKA2-208ENST00000583927 ATP2C2O75185 946 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 PDGFRBP09619 1106 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 TCF3P15923 654 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 VIPR2P41587 438 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 RPS9P46781 194 aaKnown RBP10.55□□□□□ -0.72
SKA2-208ENST00000583927 PPP3CCP48454 512 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 FKBP3Q00688 224 aaKnown RBP10.55□□□□□ -0.72
SKA2-208ENST00000583927 PLCB2Q00722 1185 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 INCA1Q0VD86 236 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 DDR2Q16832 855 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 ARHGAP29Q52LW3 1261 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 STXBP5Q5T5C0 1151 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 ZNF852Q6ZMS4 543 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 MON1AQ86VX9 555 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 CMTM8Q8IZV2 173 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 CRYBG2Q8N1P7 616 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 KIAA1958Q8N8K9 716 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 DTWD2Q8NBA8 298 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 OR6B3Q8NGW1 331 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 MRPS31Q92665 395 aaKnown RBP10.55□□□□□ -0.72
SKA2-208ENST00000583927 MYLPFQ96A32 169 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 CLDN23Q96B33 292 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 DHTKD1Q96HY7 919 aaPredicted RBP10.55□□□□□ -0.72
SKA2-208ENST00000583927 SLC46A2Q9BY10 475 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 BCO2Q9BYV7 579 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 IMPG2Q9BZV3 1241 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 CYP3A43Q9HB55 503 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 TMEM8AQ9HCN3 771 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 CHMP5Q9NZZ3 219 aa10.55□□□□□ -0.72
SKA2-208ENST00000583927 NXF1Q9UBU9 619 aaKnown RBP10.55□□□□□ -0.72
SKA2-208ENST00000583927 MRPS17Q9Y2R5 130 aaKnown RBP10.55□□□□□ -0.72
SKA2-208ENST00000583927 ZFHX2Q9C0A1 2572 aaPredicted RBP10.55□□□□□ -0.72
SKA2-208ENST00000583927 ZNF263O14978 683 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 PMM2O15305 246 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 NCAM2O15394 837 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 TADA3O75528 432 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 HLA-DRAP01903 254 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 EPB41P11171 864 aaKnown RBP10.54□□□□□ -0.72
SKA2-208ENST00000583927 RFX1P22670 979 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 BDNFP23560 247 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 CCNE1P24864 410 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 GDI1P31150 447 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 GPR15P49685 360 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 PDE6CP51160 858 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 PSMC1P62191 440 aaKnown RBP10.54□□□□□ -0.72
SKA2-208ENST00000583927 PPP3CAQ08209 521 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 STIM1Q13586 685 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 CCDC142Q17RM4 750 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 MDH1BQ5I0G3 518 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 KRT39Q6A163 491 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 MAMSTRQ6ZN01 415 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 DENND5BQ6ZUT9 1274 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 SMYD4Q8IYR2 804 aaPredicted RBP10.54□□□□□ -0.72
SKA2-208ENST00000583927 ZNF687Q8N1G0 1237 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 TTC39CQ8N584 583 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 CELF5Q8N6W0 485 aaKnown RBP10.54□□□□□ -0.72
SKA2-208ENST00000583927 ST13P5Q8NFI4 369 aaPredicted RBP10.54□□□□□ -0.72
SKA2-208ENST00000583927 BPIFB1Q8TDL5 484 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 RSPRY1Q96DX4 576 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 TSG101Q99816 390 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 IER2Q9BTL4 223 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 SMYD3Q9H7B4 428 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 C8orf33Q9H7E9 229 aaPredicted RBP10.54□□□□□ -0.72
SKA2-208ENST00000583927 LTB4R2Q9NPC1 389 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 HEBP1Q9NRV9 189 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 TDP1Q9NUW8 608 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 COQ4Q9Y3A0 265 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 MYO18AQ92614 2054 aaKnown RBP10.54□□□□□ -0.72
SKA2-208ENST00000583927 ATP8B3O60423 1300 aa10.54□□□□□ -0.72
SKA2-208ENST00000583927 SPAG17Q6Q759 2223 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 FAM92AA1XBS5 289 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 STK25O00506 426 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 DPYSL4O14531 572 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 PSMA7O14818 248 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 PRAMEF12O95522 483 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 TRIM21P19474 475 aaKnown RBP10.53□□□□□ -0.72
SKA2-208ENST00000583927 ANXA13P27216 316 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 AVPR1AP37288 418 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 GRIK1P39086 918 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 NBL1P41271 181 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 PIK3CAP42336 1068 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 ASPAP45381 313 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 CDH8P55286 799 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 UBE2HP62256 183 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 CYP4F8P98187 520 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 CYP27A1Q02318 531 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 FZD5Q13467 585 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 GRM2Q14416 872 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 ANKRD40Q6AI12 368 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms