RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 AP5Z1O43299 807 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 CCNT1O60563 726 aaKnown RBP8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 ALDH1A2O94788 518 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 SPATA31C1P0DKV0 1188 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 XRCC6P12956 609 aaKnown RBP eCLIP8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 GCFC2P16383 781 aaKnown RBP8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 ATP2B1P20020 1258 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 DDX6P26196 483 aaKnown RBP eCLIP8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 NAMPTP43490 491 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 MRPS21P82921 87 aaKnown RBP8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 RPL6Q02878 288 aaKnown RBP8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 USP4Q13107 963 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 SLC10A6Q3KNW5 377 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 LMBRD2Q68DH5 695 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 OVOS1Q6IE37 1185 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 LIAT1Q6ZQX7 453 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 RABEPKQ7Z6M1 372 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 MON1AQ86VX9 555 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 EFCAB13Q8IY85 973 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 CCDC26Q8TAB7 109 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 DEPTORQ8TB45 409 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 HMGB4Q8WW32 186 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 ATP2A3Q93084 1043 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 CCDC43Q96MW1 224 aaKnown RBP8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 GCNAQ96QF7 691 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 SEPT5Q99719 369 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 ACO2Q99798 780 aaKnown RBP8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 SEMA4CQ9C0C4 833 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 IL21RQ9HBE5 538 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 ANO2Q9NQ90 1003 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 ZMYM5Q9UJ78 669 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 DNMT3LQ9UJW3 386 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 KCNJ14Q9UNX9 436 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 TMEM131Q92545 1883 aa8.34□□□□□ -1.07
SMARCE1-217ENST00000580654 SPTAN1Q13813 2472 aaKnown RBP8.34□□□□□ -1.08
SMARCE1-217ENST00000580654 IGHV1OR15-9A0A0B4J2B8 117 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 TCRBV21S2A2A0A5A6 115 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 CAPN9O14815 690 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 PPEF2O14830 753 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 UBR5O95071 2799 aaPredicted RBP8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 GABRG2P18507 467 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 PROZP22891 400 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 LRPAP1P30533 357 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 HSPA4P34932 840 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 KIR2DL1P43626 348 aaPredicted RBP8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 SLC6A11P48066 632 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 IFNAR2P48551 515 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 CCT2P78371 535 aaKnown RBP8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 FAM160A1Q05DH4 1040 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 SCRN1Q12765 414 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 GRIK2Q13002 908 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 VEPH1Q14D04 833 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 PLEKHG6Q3KR16 790 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 MGAT5BQ3V5L5 792 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 ZNF568Q3ZCX4 644 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 SLC39A12Q504Y0 691 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 SEZ6Q53EL9 994 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 ZC2HC1CQ53FD0 456 aaPredicted RBP8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 NUDT18Q6ZVK8 323 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 TAS1R3Q7RTX0 852 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 TRIML1Q8N9V2 468 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 FAM181AQ8N9Y4 354 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 HSPA12BQ96MM6 686 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 ACAP3Q96P50 834 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 CYP2S1Q96SQ9 504 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 PRR14Q9BWN1 585 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 BCCIPQ9P287 314 aaKnown RBP eCLIP8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 MYLKQ15746 1914 aa8.33□□□□□ -1.08
SMARCE1-217ENST00000580654 TEX51A0A1B0GUA7 166 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 MED24O75448 989 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 HAPLN1P10915 354 aaPredicted RBP8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 CYP11B2P19099 503 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 TYMPP19971 482 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 MAOBP27338 520 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 PDIA3P30101 505 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 TUFMP49411 452 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 GPR15P49685 360 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 GUCY2FP51841 1108 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 EFNA5P52803 228 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 ZXDBP98169 803 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 BNC1Q01954 994 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 SPAG1Q07617 926 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 DMP1Q13316 513 aaPredicted RBP8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 BYSLQ13895 437 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 SMAD1Q15797 465 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 ZBTB6Q15916 424 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 RNF20Q5VTR2 975 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 GALNT17Q6IS24 598 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 PADI6Q6TGC4 694 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 SLC36A4Q6YBV0 504 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 DBX2Q6ZNG2 339 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 PIK3AP1Q6ZUJ8 805 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 GPR155Q7Z3F1 870 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 USP37Q86T82 979 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 LRRTM3Q86VH5 581 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 C12orf40Q86WS4 652 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 SLFN12Q8IYM2 578 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 PGBD3Q8N328 593 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 GALNT15Q8N3T1 639 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 LRRC15Q8TF66 581 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms