RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, humanhuman

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-208ENST00000580584 HLA-DRAP01903 254 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 KRT13P13646 458 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 RPL13P26373 211 aaKnown RBP16.54■□□□□ 0.24
PMP22-208ENST00000580584 WEE1P30291 646 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 AVPR1AP37288 418 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 PRCPP42785 496 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 SOX9P48436 509 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 GCLMP48507 274 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 USP46P62068 366 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 PPP3CAQ08209 521 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 ORC1Q13415 861 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 VSTM1Q6UX27 236 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 INTS8Q75QN2 995 aaKnown RBP16.54■□□□□ 0.24
PMP22-208ENST00000580584 FRMD5Q7Z6J6 570 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 RIN3Q8TB24 985 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 BPIFB1Q8TDL5 484 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 CSGALNACT1Q8TDX6 532 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 USP13Q92995 863 aaPredicted RBP16.54■□□□□ 0.24
PMP22-208ENST00000580584 SPATA17Q96L03 361 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 B3GNT5Q9BYG0 378 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 BCO2Q9BYV7 579 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 OBP2AQ9NY56 170 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 HMGXB4Q9UGU5 601 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 PCDHA5Q9Y5H7 936 aa16.54■□□□□ 0.24
PMP22-208ENST00000580584 IKBKBO14920 756 aa16.53■□□□□ 0.24
PMP22-208ENST00000580584 SMC2O95347 1197 aa16.53■□□□□ 0.24
PMP22-208ENST00000580584 FAM163BP0C2L3 166 aa16.53■□□□□ 0.24
PMP22-208ENST00000580584 CCNE1P24864 410 aa16.53■□□□□ 0.24
PMP22-208ENST00000580584 DDX6P26196 483 aaKnown RBP eCLIP16.53■□□□□ 0.24
PMP22-208ENST00000580584 ANXA13P27216 316 aa16.53■□□□□ 0.24
PMP22-208ENST00000580584 PSMC2P35998 433 aaKnown RBP16.53■□□□□ 0.24
PMP22-208ENST00000580584 TNK2Q07912 1038 aa16.53■□□□□ 0.24
PMP22-208ENST00000580584 SGSM1Q2NKQ1 1148 aa16.53■□□□□ 0.24
PMP22-208ENST00000580584 EDRF1Q3B7T1 1238 aa16.53■□□□□ 0.24
PMP22-208ENST00000580584 ZNF658Q5TYW1 1059 aaPredicted RBP16.53■□□□□ 0.24
PMP22-208ENST00000580584 MON1AQ86VX9 555 aa16.53■□□□□ 0.24
PMP22-208ENST00000580584 C1orf210Q8IVY1 113 aa16.53■□□□□ 0.24
PMP22-208ENST00000580584 CELF5Q8N6W0 485 aaKnown RBP16.53■□□□□ 0.24
PMP22-208ENST00000580584 TAS1R2Q8TE23 839 aa16.53■□□□□ 0.24
PMP22-208ENST00000580584 FAM3CQ92520 227 aa16.53■□□□□ 0.24
PMP22-208ENST00000580584 SMARCE1Q969G3 411 aa16.53■□□□□ 0.24
PMP22-208ENST00000580584 GSDMAQ96QA5 445 aa16.53■□□□□ 0.24
PMP22-208ENST00000580584 SLC22A12Q96S37 553 aa16.53■□□□□ 0.24
PMP22-208ENST00000580584 OSBPL6Q9BZF3 934 aa16.53■□□□□ 0.24
PMP22-208ENST00000580584 ELOVL4Q9GZR5 314 aa16.53■□□□□ 0.24
PMP22-208ENST00000580584 SPATA6Q9NWH7 488 aaPredicted RBP16.53■□□□□ 0.24
PMP22-208ENST00000580584 GTSE1Q9NYZ3 720 aa16.53■□□□□ 0.24
PMP22-208ENST00000580584 MRPS17Q9Y2R5 130 aaKnown RBP16.53■□□□□ 0.24
PMP22-208ENST00000580584 VPS13AQ96RL7 3174 aa16.53■□□□□ 0.24
PMP22-208ENST00000580584 C2orf78A6NCI8 922 aa16.52■□□□□ 0.24
PMP22-208ENST00000580584 MAN2B1O00754 1011 aa16.52■□□□□ 0.24
PMP22-208ENST00000580584 TRIM66O15016 1216 aa16.52■□□□□ 0.24
PMP22-208ENST00000580584 GADD45BO75293 160 aaPredicted RBP16.52■□□□□ 0.24
PMP22-208ENST00000580584 ASS1P00966 412 aaKnown RBP16.52■□□□□ 0.24
PMP22-208ENST00000580584 P4HA1P13674 534 aa16.52■□□□□ 0.24
PMP22-208ENST00000580584 NBL1P41271 181 aa16.52■□□□□ 0.24
PMP22-208ENST00000580584 ASPAP45381 313 aa16.52■□□□□ 0.24
PMP22-208ENST00000580584 KPNA1P52294 538 aaPredicted RBP16.52■□□□□ 0.24
PMP22-208ENST00000580584 FZD5Q13467 585 aa16.52■□□□□ 0.24
PMP22-208ENST00000580584 ARHGAP29Q52LW3 1261 aa16.52■□□□□ 0.24
PMP22-208ENST00000580584 ACOT1Q86TX2 421 aa16.52■□□□□ 0.24
PMP22-208ENST00000580584 MAML2Q8IZL2 1156 aaPredicted RBP16.52■□□□□ 0.24
PMP22-208ENST00000580584 ZNF687Q8N1G0 1237 aa16.52■□□□□ 0.24
PMP22-208ENST00000580584 TTC16Q8NEE8 873 aa16.52■□□□□ 0.24
PMP22-208ENST00000580584 SPATA20Q8TB22 786 aa16.52■□□□□ 0.24
PMP22-208ENST00000580584 APOBEC3GQ9HC16 384 aaKnown RBP16.52■□□□□ 0.24
PMP22-208ENST00000580584 TDP1Q9NUW8 608 aa16.52■□□□□ 0.24
PMP22-208ENST00000580584 ZMYM5Q9UJ78 669 aa16.52■□□□□ 0.24
PMP22-208ENST00000580584 TICRRQ7Z2Z1 1910 aa16.51■□□□□ 0.23
PMP22-208ENST00000580584 PIEZO1Q92508 2521 aa16.51■□□□□ 0.23
PMP22-208ENST00000580584 CKMP06732 381 aa16.51■□□□□ 0.23
PMP22-208ENST00000580584 NDST1P52848 882 aa16.51■□□□□ 0.23
PMP22-208ENST00000580584 PMS1P54277 932 aaKnown RBP16.51■□□□□ 0.23
PMP22-208ENST00000580584 TRIM68Q6AZZ1 485 aa16.51■□□□□ 0.23
PMP22-208ENST00000580584 ISM2Q6H9L7 571 aa16.51■□□□□ 0.23
PMP22-208ENST00000580584 TXNDC11Q6PKC3 985 aa16.51■□□□□ 0.23
PMP22-208ENST00000580584 DENND5BQ6ZUT9 1274 aa16.51■□□□□ 0.23
PMP22-208ENST00000580584 FAM35AQ86V20 835 aa16.51■□□□□ 0.23
PMP22-208ENST00000580584 TAF4BQ92750 862 aa16.51■□□□□ 0.23
PMP22-208ENST00000580584 CLDN23Q96B33 292 aa16.51■□□□□ 0.23
PMP22-208ENST00000580584 C8orf48Q96LL4 319 aa16.51■□□□□ 0.23
PMP22-208ENST00000580584 TIGD1Q96MW7 591 aa16.51■□□□□ 0.23
PMP22-208ENST00000580584 CYP2S1Q96SQ9 504 aa16.51■□□□□ 0.23
PMP22-208ENST00000580584 NELL2Q99435 816 aa16.51■□□□□ 0.23
PMP22-208ENST00000580584 MED10Q9BTT4 135 aa16.51■□□□□ 0.23
PMP22-208ENST00000580584 HOOK1Q9UJC3 728 aaKnown RBP16.51■□□□□ 0.23
PMP22-208ENST00000580584 CACNA1HO95180 2353 aa16.51■□□□□ 0.23
PMP22-208ENST00000580584 NUP210Q8TEM1 1887 aaPredicted RBP16.5■□□□□ 0.23
PMP22-208ENST00000580584 TRAV19A0A0A6YYK7 116 aa16.5■□□□□ 0.23
PMP22-208ENST00000580584 TRIM49BA6NDI0 452 aa16.5■□□□□ 0.23
PMP22-208ENST00000580584 SPECC1L-ADORA2AF8WAN1 911 aa16.5■□□□□ 0.23
PMP22-208ENST00000580584 CETN3O15182 167 aa16.5■□□□□ 0.23
PMP22-208ENST00000580584 NCAM2O15394 837 aa16.5■□□□□ 0.23
PMP22-208ENST00000580584 GFRA3O60609 400 aa16.5■□□□□ 0.23
PMP22-208ENST00000580584 KINO60870 393 aaKnown RBP16.5■□□□□ 0.23
PMP22-208ENST00000580584 SP9P0CG40 484 aa16.5■□□□□ 0.23
PMP22-208ENST00000580584 EPB41P11171 864 aaKnown RBP16.5■□□□□ 0.23
PMP22-208ENST00000580584 CCDC130P13994 396 aa16.5■□□□□ 0.23
PMP22-208ENST00000580584 CTHP32929 405 aa16.5■□□□□ 0.23
PMP22-208ENST00000580584 NOP14P78316 857 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms