RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 ME1P48163 572 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 SLC12A3P55017 1021 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 NCBP1Q09161 790 aaKnown RBP3.67□□□□□ -1.82
CDH19-204ENST00000579658 LAMTOR4Q0VGL1 99 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 GRIK3Q13003 919 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 SRSF5Q13243 272 aaKnown RBP3.67□□□□□ -1.82
CDH19-204ENST00000579658 PLD1Q13393 1074 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 CAPSQ13938 189 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 PSMD5Q16401 504 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 USP39Q53GS9 565 aaKnown RBP3.67□□□□□ -1.82
CDH19-204ENST00000579658 CYP4A22Q5TCH4 519 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 PEAR1Q5VY43 1037 aaPredicted RBP3.67□□□□□ -1.82
CDH19-204ENST00000579658 ARMC3Q5W041 872 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 HEATR6Q6AI08 1181 aaKnown RBP3.67□□□□□ -1.82
CDH19-204ENST00000579658 SLC23A3Q6PIS1 610 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 LRRC69Q6ZNQ3 347 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 C1orf186Q6ZWK4 172 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 OTUD6AQ7L8S5 288 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 DYMQ7RTS9 669 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 RETREG3Q86VR2 466 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 ATCAYQ86WG3 371 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 LRRC8AQ8IWT6 810 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 ERMNQ8TAM6 284 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 ITFG1Q8TB96 612 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 CACTINQ8WUQ7 758 aaKnown RBP3.67□□□□□ -1.82
CDH19-204ENST00000579658 RAD54LQ92698 747 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 DHX58Q96C10 678 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 LRIG1Q96JA1 1093 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 NLRP4Q96MN2 994 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 NACC1Q96RE7 527 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 TTPALQ9BTX7 342 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 TRIM5Q9C035 493 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 CCSER1Q9C0I3 900 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 POLR3FQ9H1D9 316 aaPredicted RBP3.67□□□□□ -1.82
CDH19-204ENST00000579658 IKZF4Q9H2S9 585 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 PRORYQ9H606 182 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 IFT122Q9HBG6 1241 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 AGPAT5Q9NUQ2 364 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 PIN4Q9Y237 131 aaKnown RBP3.67□□□□□ -1.82
CDH19-204ENST00000579658 PCDHB2Q9Y5E7 798 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 BACE2Q9Y5Z0 518 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 NOTCH4Q99466 2003 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 GCN1Q92616 2671 aaKnown RBP3.67□□□□□ -1.82
CDH19-204ENST00000579658 ARHGEF35A5YM69 484 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 MYMKA6NI61 221 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 MEIS3P2A8K0S8 358 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 SPECC1L-ADORA2AF8WAN1 911 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 B4GALT5O43286 388 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 CUTAO60888 179 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 HIP1RO75146 1068 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 C1QL1O75973 258 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 DDHD2O94830 711 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 WISP1O95388 367 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 BMP15O95972 392 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 LRG1P02750 347 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 RHOP08100 348 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 TNNT1P13805 278 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 CYP11B2P19099 503 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 CTHP32929 405 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 ARL2P36404 184 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 RHDQ02161 417 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 CFHR1Q03591 330 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 FCHO2Q0JRZ9 810 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 GRSF1Q12849 480 aaKnown RBP eCLIP3.67□□□□□ -1.82
CDH19-204ENST00000579658 LRMPQ12912 555 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 CCINQ13939 588 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 GAS6Q14393 721 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 PRSS36Q5K4E3 855 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 HAUS3Q68CZ6 603 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 TANGO2Q6ICL3 276 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 KIAA1211LQ6NV74 962 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 BLOC1S3Q6QNY0 202 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 CATSPER4Q7RTX7 472 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 GPBP1Q86WP2 473 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 ZNF843Q8N446 348 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 ZNF513Q8N8E2 541 aaPredicted RBP3.67□□□□□ -1.82
CDH19-204ENST00000579658 SYT2Q8N9I0 419 aaPredicted RBP3.67□□□□□ -1.82
CDH19-204ENST00000579658 RNF149Q8NC42 400 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 HNRNPLLQ8WVV9 542 aaKnown RBP3.67□□□□□ -1.82
CDH19-204ENST00000579658 HPS3Q969F9 1004 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 CPB2Q96IY4 423 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 OXCT2Q9BYC2 517 aaPredicted RBP3.67□□□□□ -1.82
CDH19-204ENST00000579658 FGFBP2Q9BYJ0 223 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 NIF3L1Q9GZT8 377 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 DNAJC25Q9H1X3 360 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 OGFRQ9NZT2 677 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 DNMT3BQ9UBC3 853 aaKnown RBP3.67□□□□□ -1.82
CDH19-204ENST00000579658 SERTAD1Q9UHV2 236 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 DNM3Q9UQ16 869 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 SLC27A5Q9Y2P5 690 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 SPTBN2O15020 2390 aa3.67□□□□□ -1.82
CDH19-204ENST00000579658 ENO4A6NNW6 628 aa3.66□□□□□ -1.82
CDH19-204ENST00000579658 TMEM189-UBE2V1I3L0A0 370 aa3.66□□□□□ -1.82
CDH19-204ENST00000579658 ARNTLO00327 626 aa3.66□□□□□ -1.82
CDH19-204ENST00000579658 CCL16O15467 120 aa3.66□□□□□ -1.82
CDH19-204ENST00000579658 POLR2DO15514 142 aaKnown RBP3.66□□□□□ -1.82
CDH19-204ENST00000579658 ASAP2O43150 1006 aa3.66□□□□□ -1.82
CDH19-204ENST00000579658 DKC1O60832 514 aaKnown RBP eCLIP3.66□□□□□ -1.82
CDH19-204ENST00000579658 TADA2AO75478 443 aa3.66□□□□□ -1.82
CDH19-204ENST00000579658 DGAT1O75907 488 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms