RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 SDHAF4Q5VUM1 108 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 FOXR2Q6PJQ5 311 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 CCDC105Q8IYK2 499 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 MRPS31Q92665 395 aaKnown RBP15.82■□□□□ 0.12
SS18-212ENST00000579061 ERCC4Q92889 916 aaPredicted RBP15.82■□□□□ 0.12
SS18-212ENST00000579061 DHTKD1Q96HY7 919 aaPredicted RBP15.82■□□□□ 0.12
SS18-212ENST00000579061 FAXDC2Q96IV6 333 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 C8orf48Q96LL4 319 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 SLC46A2Q9BY10 475 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 ELOVL4Q9GZR5 314 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 EHD2Q9NZN4 543 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 MAN1B1Q9UKM7 699 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 MAGED2Q9UNF1 606 aaPredicted RBP15.82■□□□□ 0.12
SS18-212ENST00000579061 SIT1Q9Y3P8 196 aa15.82■□□□□ 0.12
SS18-212ENST00000579061 KIF26AQ9ULI4 1882 aaPredicted RBP15.82■□□□□ 0.12
SS18-212ENST00000579061 KANSL1LA0AUZ9 987 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 NCANO14594 1321 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 ZNF263O14978 683 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 ATP8B3O60423 1300 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 CLSTN1O94985 981 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 ANXA13P27216 316 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 GDI1P31150 447 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 MLLT6P55198 1093 aaPredicted RBP15.81■□□□□ 0.12
SS18-212ENST00000579061 KRT39Q6A163 491 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 ANKRD40Q6AI12 368 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 DENND5BQ6ZUT9 1274 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 MON1AQ86VX9 555 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 UNC93AQ86WB7 457 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 YAF2Q8IY57 180 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 CMTM8Q8IZV2 173 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 CCDC150Q8NCX0 1101 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 RSPRY1Q96DX4 576 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 NELL2Q99435 816 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 TTLL2Q9BWV7 592 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 BCO2Q9BYV7 579 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 SDCBP2Q9H190 292 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 DPEP3Q9H4B8 488 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 KIF9Q9HAQ2 790 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 CYP3A43Q9HB55 503 aa15.81■□□□□ 0.12
SS18-212ENST00000579061 TADA3O75528 432 aa15.8■□□□□ 0.12
SS18-212ENST00000579061 GLULP15104 373 aa15.8■□□□□ 0.12
SS18-212ENST00000579061 ASPAP45381 313 aa15.8■□□□□ 0.12
SS18-212ENST00000579061 NOP14P78316 857 aaKnown RBP15.8■□□□□ 0.12
SS18-212ENST00000579061 MORC3Q14149 939 aa15.8■□□□□ 0.12
SS18-212ENST00000579061 ARHGAP29Q52LW3 1261 aa15.8■□□□□ 0.12
SS18-212ENST00000579061 SCARA5Q6ZMJ2 495 aa15.8■□□□□ 0.12
SS18-212ENST00000579061 CRYBG2Q8N1P7 616 aa15.8■□□□□ 0.12
SS18-212ENST00000579061 CELF5Q8N6W0 485 aaKnown RBP15.8■□□□□ 0.12
SS18-212ENST00000579061 MAB21L3Q8N8X9 362 aa15.8■□□□□ 0.12
SS18-212ENST00000579061 DTWD2Q8NBA8 298 aa15.8■□□□□ 0.12
SS18-212ENST00000579061 PJA1Q8NG27 643 aa15.8■□□□□ 0.12
SS18-212ENST00000579061 TAS1R2Q8TE23 839 aa15.8■□□□□ 0.12
SS18-212ENST00000579061 B3GNT5Q9BYG0 378 aa15.8■□□□□ 0.12
SS18-212ENST00000579061 HEBP1Q9NRV9 189 aa15.8■□□□□ 0.12
SS18-212ENST00000579061 MRPS17Q9Y2R5 130 aaKnown RBP15.8■□□□□ 0.12
SS18-212ENST00000579061 F8VP50 259 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 ARNTLO00327 626 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 MAN2B1O00754 1011 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 PFKLP17858 780 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 TRIM21P19474 475 aaKnown RBP15.79■□□□□ 0.12
SS18-212ENST00000579061 AVPR1AP37288 418 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 MAGEA9P43362 315 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 RAP1GAPP47736 663 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 PPP3CCP48454 512 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 MXI1P50539 228 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 PMS1P54277 932 aaKnown RBP15.79■□□□□ 0.12
SS18-212ENST00000579061 PLCB2Q00722 1185 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 INCA1Q0VD86 236 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 ZNF268Q14587 947 aaPredicted RBP15.79■□□□□ 0.12
SS18-212ENST00000579061 TXNDC8Q6A555 127 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 SPOPLQ6IQ16 392 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 C1orf228Q6PIY5 440 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 TPRG1Q6ZUI0 275 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 STKLD1Q8NE28 680 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 FBXL13Q8NEE6 735 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 BPIFB1Q8TDL5 484 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 MSANTD3Q96H12 275 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 CEP63Q96MT8 703 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 FOXQ1Q9C009 403 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 ZNF518BQ9C0D4 1074 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 NIF3L1Q9GZT8 377 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 METTL14Q9HCE5 456 aaKnown RBP15.79■□□□□ 0.12
SS18-212ENST00000579061 LTB4R2Q9NPC1 389 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 DLGAP2Q9P1A6 1054 aa15.79■□□□□ 0.12
SS18-212ENST00000579061 PIEZO1Q92508 2521 aa15.78■□□□□ 0.12
SS18-212ENST00000579061 HELZP42694 1942 aaKnown RBP15.78■□□□□ 0.12
SS18-212ENST00000579061 BICDL2A1A5D9 508 aa15.78■□□□□ 0.12
SS18-212ENST00000579061 TRIM49BA6NDI0 452 aa15.78■□□□□ 0.12
SS18-212ENST00000579061 PPP1R3GB7ZBB8 358 aa15.78■□□□□ 0.12
SS18-212ENST00000579061 NCAM2O15394 837 aa15.78■□□□□ 0.12
SS18-212ENST00000579061 PRAMEF12O95522 483 aa15.78■□□□□ 0.12
SS18-212ENST00000579061 PDE6CP51160 858 aa15.78■□□□□ 0.12
SS18-212ENST00000579061 NDST1P52848 882 aa15.78■□□□□ 0.12
SS18-212ENST00000579061 ZNF852Q6ZMS4 543 aa15.78■□□□□ 0.12
SS18-212ENST00000579061 FILIP1Q7Z7B0 1213 aa15.78■□□□□ 0.12
SS18-212ENST00000579061 TTC39CQ8N584 583 aa15.78■□□□□ 0.12
SS18-212ENST00000579061 TRIML1Q8N9V2 468 aa15.78■□□□□ 0.12
SS18-212ENST00000579061 CSGALNACT1Q8TDX6 532 aa15.78■□□□□ 0.12
SS18-212ENST00000579061 ELMO3Q96BJ8 720 aa15.78■□□□□ 0.12
SS18-212ENST00000579061 EEF2KMTQ96G04 330 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms