RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 WARSP23381 471 aaKnown RBP9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 GNL1P36915 607 aaPredicted RBP9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 IFNAR2P48551 515 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 FAM160A1Q05DH4 1040 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 BIRC3Q13489 604 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CCINQ13939 588 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SIM2Q14190 667 aaPredicted RBP9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 PSMD6Q15008 389 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 MAPRE1Q15691 268 aaKnown RBP9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 KNOP1Q1ED39 458 aaKnown RBP9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 WDR72Q3MJ13 1102 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 RESP18Q5W5W9 173 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CNNM4Q6P4Q7 775 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 FAM171BQ6P995 826 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CEP68Q76N32 757 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 LONP2Q86WA8 852 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CPA6Q8N4T0 437 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 RIN3Q8TB24 985 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 PCED1BQ96HM7 432 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 MYRFLQ96LU7 910 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SLC22A12Q96S37 553 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 FAM83CQ9BQN1 747 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 CRTAC1Q9NQ79 661 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 EXOC1Q9NV70 894 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 C2orf42Q9NWW7 574 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 DUS2Q9NX74 493 aaKnown RBP9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 SERTAD1Q9UHV2 236 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 WNT6Q9Y6F9 365 aa9.84□□□□□ -0.83
CDK5RAP3-211ENST00000578996 DNAH14Q0VDD8 3507 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CACNA1IQ9P0X4 2223 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PVALEFA0A1B0GWK0 134 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 OTOL1A6NHN0 477 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 A8MXQ7 604 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 K7ESF4 209 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 TRIM66O15016 1216 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 RNF40O75150 1001 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 EGFP01133 1207 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 HDCP19113 662 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 HOXC13P31276 330 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 MAGEA11P43364 429 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PXNP49023 591 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CASP4P49662 377 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 MYL6P60660 151 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SNRPFP62306 86 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 AMPD2Q01433 879 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 EHHADHQ08426 723 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SPEM2Q0P670 501 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PSMD2Q13200 908 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ZNF268Q14587 947 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PUM1Q14671 1186 aaKnown RBP eCLIP9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PDGFRLQ15198 375 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ZNF77Q15935 545 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 LAIR1Q6GTX8 287 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 FSTL4Q6MZW2 842 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PKN3Q6P5Z2 889 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 VSTM1Q6UX27 236 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SCARA5Q6ZMJ2 495 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 MAMSTRQ6ZN01 415 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 DENND5BQ6ZUT9 1274 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SYNPOQ8N3V7 929 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 GPR161Q8N6U8 529 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SH3RF2Q8TEC5 729 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 OSCP1Q8WVF1 389 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 EXOC4Q96A65 974 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CHFRQ96EP1 664 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 DPEP3Q9H4B8 488 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 TRPM5Q9NZQ8 1165 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CDV3Q9UKY7 258 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SLC8A2Q9UPR5 921 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 FRYLO94915 3013 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 FANCMQ8IYD8 2048 aa9.83□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PTPRZ1P23471 2315 aaPredicted RBP9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 A0A1B0GVL5 298 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SOBPA7XYQ1 873 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 F8VP50 259 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 HRO43593 1189 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 TACC1O75410 805 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PTPN1P18031 435 aaKnown RBP9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 GJA4P35212 333 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 RAP1GAPP47736 663 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 GALK1P51570 392 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 USP46P62068 366 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 LMNB2Q03252 620 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 USP4Q13107 963 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 BMT2Q1RMZ1 405 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ZNF699Q32M78 642 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 KMT5BQ4FZB7 885 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 TMEM196Q5HYL7 178 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 NAIF1Q69YI7 327 aaPredicted RBP9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ATL3Q6DD88 541 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 GOLGA5Q8TBA6 731 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 MYCBPAPQ8TBZ2 947 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ZNF516Q92618 1163 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ATP2A3Q93084 1043 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SYAP1Q96A49 352 aaPredicted RBP9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ELMO3Q96BJ8 720 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PAGE5Q96GU1 130 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SPATA17Q96L03 361 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 P2RY13Q9BPV8 354 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms