RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 MRPL47Q9HD33 250 aaKnown RBP14.19□□□□□ -0.14
SRSF1-202ENST00000578430 CHST7Q9NS84 486 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 LCMT1Q9UIC8 334 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 BACE2Q9Y5Z0 518 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 SCINQ9Y6U3 715 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 A0A0U1RQJ8 604 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 MYBPHLA2RUH7 354 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 XPO1O14980 1071 aaKnown RBP14.18□□□□□ -0.14
SRSF1-202ENST00000578430 TBC1D4O60343 1298 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 FAM200BP0CF97 657 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 NPR3P17342 541 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 SSTR3P32745 418 aaPredicted RBP14.18□□□□□ -0.14
SRSF1-202ENST00000578430 BMP8BP34820 402 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 RPL34P49207 117 aaKnown RBP14.18□□□□□ -0.14
SRSF1-202ENST00000578430 TAP1Q03518 808 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 PDCLQ13371 301 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 ZNF268Q14587 947 aaPredicted RBP14.18□□□□□ -0.14
SRSF1-202ENST00000578430 MMS22LQ6ZRQ5 1243 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 FAM35AQ86V20 835 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 TMEM173Q86WV6 379 aaPredicted RBP14.18□□□□□ -0.14
SRSF1-202ENST00000578430 CEP57Q86XR8 500 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 ZDHHC17Q8IUH5 632 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 OR10T2Q8NGX3 314 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 UBA3Q8TBC4 463 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 C2orf15Q8WU43 125 aaKnown RBP14.18□□□□□ -0.14
SRSF1-202ENST00000578430 ATRIPQ8WXE1 791 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 C18orf8Q96DM3 657 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 SMARCD1Q96GM5 515 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 PCED1BQ96HM7 432 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 ALS2CR12Q96Q35 445 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 C11orf70Q9BRQ4 267 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 PLVAPQ9BX97 442 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 SLC4A5Q9BY07 1137 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 SYNCQ9H7C4 482 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 PARVAQ9NVD7 372 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 CNOT8Q9UFF9 292 aaKnown RBP14.18□□□□□ -0.14
SRSF1-202ENST00000578430 SSX2IPQ9Y2D8 614 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 DUSP10Q9Y6W6 482 aa14.18□□□□□ -0.14
SRSF1-202ENST00000578430 MACROD2A1Z1Q3 448 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 ADORA2BP29275 332 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 NOP2P46087 812 aaKnown RBP14.17□□□□□ -0.14
SRSF1-202ENST00000578430 PLA2G4AP47712 749 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 GLUD2P49448 558 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 GNG11P61952 73 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 DSG1Q02413 1049 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 CREMQ03060 361 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 PDE4CQ08493 712 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 CFAP221Q4G0U5 840 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 PTPN20Q4JDL3 420 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 PLEKHA7Q6IQ23 1121 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 KIAA1841Q6NSI8 718 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 PAQR9Q6ZVX9 377 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 Q7L0L9 218 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 TMEM110Q86TL2 294 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 SPATA2LQ8IUW3 424 aaPredicted RBP14.17□□□□□ -0.14
SRSF1-202ENST00000578430 SLC35G2Q8TBE7 412 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 MYLPFQ96A32 169 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 ARHGEF26Q96DR7 871 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 RNPC3Q96LT9 517 aaKnown RBP14.17□□□□□ -0.14
SRSF1-202ENST00000578430 C16orf45Q96MC5 204 aaPredicted RBP14.17□□□□□ -0.14
SRSF1-202ENST00000578430 LPIN3Q9BQK8 851 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 CSNK1G1Q9HCP0 422 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 ABCB6Q9NP58 842 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 PNPLA8Q9NP80 782 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 CTTNBP2NLQ9P2B4 639 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 MTRRQ9UBK8 725 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 TRIM10Q9UDY6 481 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 TFR2Q9UP52 801 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 PCDHGC5Q9Y5F6 944 aa14.17□□□□□ -0.14
SRSF1-202ENST00000578430 LAMA2P24043 3122 aaKnown RBP14.17□□□□□ -0.14
SRSF1-202ENST00000578430 VWA8A3KMH1 1905 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 AP1G2O75843 785 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 ABL1P00519 1130 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 LINC00271P0C7V0 271 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 TNNT1P13805 278 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 RRM1P23921 792 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 SCNN1AP37088 669 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 MAGEA11P43364 429 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 NAP1L1P55209 391 aaKnown RBP14.16□□□□□ -0.14
SRSF1-202ENST00000578430 GPR17Q13304 367 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 PSMD5Q16401 504 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 ZNF569Q5MCW4 686 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 RTP2Q5QGT7 225 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 SLC8B1Q6J4K2 584 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 VSTM1Q6UX27 236 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 LRRTM3Q86VH5 581 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 DNAAF5Q86Y56 855 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 SYCE1Q8N0S2 351 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 C3orf20Q8ND61 904 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 KCTD13Q8WZ19 329 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 SAMD11Q96NU1 681 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 CPXM1Q96SM3 734 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.16□□□□□ -0.14
SRSF1-202ENST00000578430 CYTH4Q9UIA0 394 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 SALL4Q9UJQ4 1053 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 LZTS1Q9Y250 596 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 FARP1Q9Y4F1 1045 aaPredicted RBP14.16□□□□□ -0.14
SRSF1-202ENST00000578430 PAXBP1Q9Y5B6 917 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 PCDHB5Q9Y5E4 795 aa14.16□□□□□ -0.14
SRSF1-202ENST00000578430 CLDN5O00501 218 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms