RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 LRRTM3Q86VH5 581 aa13.86□□□□□ -0.19
CTC1-203ENST00000578240 ERICH1Q86X53 443 aa13.86□□□□□ -0.19
CTC1-203ENST00000578240 TMEM199Q8N511 208 aa13.86□□□□□ -0.19
CTC1-203ENST00000578240 ANKRD52Q8NB46 1076 aa13.86□□□□□ -0.19
CTC1-203ENST00000578240 COG1Q8WTW3 980 aa13.86□□□□□ -0.19
CTC1-203ENST00000578240 CD101Q93033 1021 aa13.86□□□□□ -0.19
CTC1-203ENST00000578240 MCRS1Q96EZ8 462 aa13.86□□□□□ -0.19
CTC1-203ENST00000578240 PCED1BQ96HM7 432 aa13.86□□□□□ -0.19
CTC1-203ENST00000578240 HES6Q96HZ4 224 aa13.86□□□□□ -0.19
CTC1-203ENST00000578240 B3GALT6Q96L58 329 aa13.86□□□□□ -0.19
CTC1-203ENST00000578240 GDF15Q99988 308 aa13.86□□□□□ -0.19
CTC1-203ENST00000578240 SLC4A5Q9BY07 1137 aa13.86□□□□□ -0.19
CTC1-203ENST00000578240 RHOBTB2Q9BYZ6 727 aa13.86□□□□□ -0.19
CTC1-203ENST00000578240 ANAPC7Q9UJX3 599 aa13.86□□□□□ -0.19
CTC1-203ENST00000578240 CDH9Q9ULB4 789 aa13.86□□□□□ -0.19
CTC1-203ENST00000578240 MTCL1Q9Y4B5 1905 aaKnown RBP13.86□□□□□ -0.19
CTC1-203ENST00000578240 NT5C1B-RDH14C9J2C7 533 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 PIK3R2O00459 728 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 ZNF185O15231 689 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 DDX3YO15523 660 aaKnown RBP13.85□□□□□ -0.19
CTC1-203ENST00000578240 SETSIPP0DME0 302 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 BMP8BP34820 402 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 RGS7P49802 495 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 BST2Q10589 180 aaKnown RBP13.85□□□□□ -0.19
CTC1-203ENST00000578240 DCAF12L1Q5VU92 463 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 TRNP1Q6NT89 227 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 FAM171BQ6P995 826 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 FAM35AQ86V20 835 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 RNF168Q8IYW5 571 aaPredicted RBP13.85□□□□□ -0.19
CTC1-203ENST00000578240 ZMIZ2Q8NF64 920 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 JOSD2Q8TAC2 188 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 BADQ92934 168 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 MYLPFQ96A32 169 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 FAM193BQ96PV7 902 aaPredicted RBP13.85□□□□□ -0.19
CTC1-203ENST00000578240 OSBPL9Q96SU4 736 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 PSMB7Q99436 277 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 TMEM175Q9BSA9 504 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 EHD2Q9NZN4 543 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 CDC23Q9UJX2 597 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 TRANK1O15050 2925 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 TMEM191CA6NGB0 347 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 PDE2AO00408 941 aaPredicted RBP13.85□□□□□ -0.19
CTC1-203ENST00000578240 LINC00271P0C7V0 271 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 CXCR5P32302 372 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 PLA2G4AP47712 749 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 PLCB3Q01970 1234 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 LIN9Q5TKA1 542 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 OLFML1Q6UWY5 402 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 FAM183BPQ6ZVS7 135 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 OTOP2Q7RTS6 562 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 MYCBPAPQ8TBZ2 947 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 ALG3Q92685 438 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 KRT35Q92764 455 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 MCEEQ96PE7 176 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 ACBD6Q9BR61 282 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 KRT82Q9NSB4 513 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 HESX1Q9UBX0 185 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 DSEQ9UL01 958 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 ALG6Q9Y672 507 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 SAR1BQ9Y6B6 198 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 SCINQ9Y6U3 715 aa13.85□□□□□ -0.19
CTC1-203ENST00000578240 TMEM110-MUSTN1A8MSY1 372 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 PAPSS1O43252 624 aaPredicted RBP13.84□□□□□ -0.19
CTC1-203ENST00000578240 BAIAP3O94812 1187 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 OAZ2O95190 189 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 OR4Q2P0C623 313 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 NPR3P17342 541 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 COMTP21964 271 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 FGFR3P22607 806 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 PCSK1P29120 753 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 RABGGTBP53611 331 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 YWHAHQ04917 246 aaPredicted RBP13.84□□□□□ -0.19
CTC1-203ENST00000578240 MRPL58Q14197 206 aaKnown RBP13.84□□□□□ -0.19
CTC1-203ENST00000578240 MESDQ14696 234 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 RTP2Q5QGT7 225 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 FAM117BQ6P1L5 589 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 DNAJC24Q6P3W2 148 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 FUT10Q6P4F1 479 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 PEX26Q7Z412 305 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 TMEM110Q86TL2 294 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 SYCE1Q8N0S2 351 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 CLEC4CQ8WTT0 213 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 STK32AQ8WU08 396 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 KHSRPQ92945 711 aaKnown RBP eCLIP13.84□□□□□ -0.19
CTC1-203ENST00000578240 C18orf8Q96DM3 657 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 SMOQ99835 787 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 LBHD1Q9BQE6 289 aaPredicted RBP13.84□□□□□ -0.19
CTC1-203ENST00000578240 METTL5Q9NRN9 209 aaKnown RBP13.84□□□□□ -0.19
CTC1-203ENST00000578240 PARVAQ9NVD7 372 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 SMARCAL1Q9NZC9 954 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 CXXC1Q9P0U4 656 aaPredicted RBP13.84□□□□□ -0.19
CTC1-203ENST00000578240 STRIP2Q9ULQ0 834 aa13.84□□□□□ -0.19
CTC1-203ENST00000578240 GOLGA8SH3BPF8 625 aa13.83□□□□□ -0.2
CTC1-203ENST00000578240 XPO1O14980 1071 aaKnown RBP13.83□□□□□ -0.2
CTC1-203ENST00000578240 SYN3O14994 580 aa13.83□□□□□ -0.2
CTC1-203ENST00000578240 AMHP03971 560 aa13.83□□□□□ -0.2
CTC1-203ENST00000578240 TCF4P15884 667 aa13.83□□□□□ -0.2
CTC1-203ENST00000578240 PRLRP16471 622 aa13.83□□□□□ -0.2
CTC1-203ENST00000578240 DNA2P51530 1060 aa13.83□□□□□ -0.2
CTC1-203ENST00000578240 VARS2Q5ST30 1063 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms