RNA–Protein interactions for RNA: ENST00000577939.1

SUPT6H-204, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-204ENST00000577939 PPP3CCP48454 512 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 ZNF528Q3MIS6 628 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 MDH1BQ5I0G3 518 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 STXBP5Q5T5C0 1151 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 TDRD10Q5VZ19 366 aaKnown RBP10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 FAM171BQ6P995 826 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 SCARA5Q6ZMJ2 495 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 DENND5BQ6ZUT9 1274 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 LIMS2Q7Z4I7 341 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 FRMD5Q7Z6J6 570 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 RALGPS2Q86X27 583 aaPredicted RBP10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 MAB21L3Q8N8X9 362 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 B3GALNT2Q8NCR0 500 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 FAM84AQ96KN4 292 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 MYRFLQ96LU7 910 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 SLITRK1Q96PX8 696 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 PKMYT1Q99640 499 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 FAM126AQ9BYI3 521 aaPredicted RBP10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 KCTD10Q9H3F6 313 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 IL21Q9HBE4 155 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 TRPC7Q9HCX4 862 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 TMLHEQ9NVH6 421 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 DLGAP2Q9P1A6 1054 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 NDRG2Q9UN36 371 aaKnown RBP10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 TRAF3IP3Q9Y228 551 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 RALGAPA1Q6GYQ0 2036 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 COL4A3Q01955 1670 aa10.85□□□□□ -0.67
SUPT6H-204ENST00000577939 EP300Q09472 2414 aaPredicted RBP10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 ZNF292O60281 2723 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 MYBPHLA2RUH7 354 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 PRR23AA6NEV1 266 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 KINO60870 393 aaKnown RBP10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 RTN3O95197 1032 aaPredicted RBP10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 PRAMEF12O95522 483 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 PDGFRBP09619 1106 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 HMGA1P17096 107 aaKnown RBP10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 BDNFP23560 247 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 PSMC2P35998 433 aaKnown RBP10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 PPP1R2P41236 205 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 CCR3P51677 355 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 VAMP7P51809 220 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 NRLP54845 237 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 MYL6P60660 151 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 CLDN10P78369 228 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 FAM160A1Q05DH4 1040 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 PDGFRLQ15198 375 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 DDR2Q16832 855 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 SGSM1Q2NKQ1 1148 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 EDRF1Q3B7T1 1238 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 ITPRIPL2Q3MIP1 535 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 DGKKQ5KSL6 1271 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 MON1AQ86VX9 555 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 FAM186BQ8IYM0 893 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 CPA6Q8N4T0 437 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 TTC39CQ8N584 583 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 PDZD8Q8NEN9 1154 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 CLDN23Q96B33 292 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 SMARCD1Q96GM5 515 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 PCED1BQ96HM7 432 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 MED10Q9BTT4 135 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 MKNK1Q9BUB5 465 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 CHRDQ9H2X0 955 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 GDPD2Q9HCC8 539 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 TDP1Q9NUW8 608 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 DMAC2Q9NW81 257 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 TRPM5Q9NZQ8 1165 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 SPTBN4Q9H254 2564 aa10.84□□□□□ -0.67
SUPT6H-204ENST00000577939 ATG2BQ96BY7 2078 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 OTOGLQ3ZCN5 2332 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 SPECC1L-ADORA2AF8WAN1 911 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 ARNTLO00327 626 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 CETN3O15182 167 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 F11P03951 625 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 PRR29P0C7W0 189 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 PTPN1P18031 435 aaKnown RBP10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 CD72P21854 359 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 CTHP32929 405 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 IFNAR2P48551 515 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 CASP4P49662 377 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 GPR15P49685 360 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 NOP14P78316 857 aaKnown RBP10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 ZACNQ401N2 412 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 SDHAF4Q5VUM1 108 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 DDX42Q86XP3 938 aaKnown RBP eCLIP10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 STKLD1Q8NE28 680 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 CCDC26Q8TAB7 109 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 OVCA2Q8WZ82 227 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 SECISBP2LQ93073 1101 aaKnown RBP10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 ATP2A3Q93084 1043 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 SMARCE1Q969G3 411 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 C8orf48Q96LL4 319 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 GSDMAQ96QA5 445 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 HINFPQ9BQA5 517 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 MRPL45Q9BRJ2 306 aaKnown RBP10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 XYLT2Q9H1B5 865 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 GOLPH3LQ9H4A5 285 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 SMYD3Q9H7B4 428 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 DMAP1Q9NPF5 467 aaPredicted RBP10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 CRTAC1Q9NQ79 661 aa10.83□□□□□ -0.68
SUPT6H-204ENST00000577939 PCDHGA2Q9Y5H1 932 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms