RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 MESP2Q0VG99 397 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 LMAN2Q12907 356 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 GAB4Q2WGN9 574 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 ADALQ6DHV7 355 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 C19orf48Q6RUI8 117 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 LPCAT2Q7L5N7 544 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 DEFB119Q8N690 84 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 ALLCQ8N6M5 410 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 FAM184AQ8NB25 1140 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 TXNDC5Q8NBS9 432 aaKnown RBP10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 KCNN1Q92952 543 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 MYRFLQ96LU7 910 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 REEP2Q9BRK0 252 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 LLPHQ9BRT6 129 aaKnown RBP10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 NUSAP1Q9BXS6 441 aaKnown RBP10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 CCSER1Q9C0I3 900 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 ZHX3Q9H4I2 956 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 DDX43Q9NXZ2 648 aaKnown RBP10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 KCND2Q9NZV8 630 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 EVLQ9UI08 416 aaPredicted RBP10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 MMP17Q9ULZ9 603 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 LIMCH1Q9UPQ0 1083 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 C2CD2Q9Y426 696 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 GTF3C3Q9Y5Q9 886 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 CELSR3Q9NYQ7 3312 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 VWA3AA6NCI4 1184 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 SGK1O00141 431 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 TNFRSF10BO14763 440 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 FAM13AO94988 1023 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 CAPNS1P04632 268 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 ITPKAP23677 461 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 TIE1P35590 1138 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 P2RY2P41231 377 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 WNT7BP56706 349 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 RPL10AP62906 217 aaKnown RBP10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 GTF2BQ00403 316 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 USP4Q13107 963 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 SEMA3BQ13214 749 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 NFE2Q16621 373 aaPredicted RBP10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 SV2CQ496J9 727 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 TMEM119Q4V9L6 283 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 CRELD2Q6UXH1 353 aaPredicted RBP10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 PIP4P1Q86T03 277 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 OSTM1Q86WC4 334 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 GPBP1Q86WP2 473 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 SYT12Q8IV01 421 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 SCN4BQ8IWT1 228 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 ADGRG2Q8IZP9 1017 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 PDCL2Q8N4E4 241 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 CCDC26Q8TAB7 109 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 TRMT2BQ96GJ1 504 aaKnown RBP10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 CDK5RAP3Q96JB5 506 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 FIZ1Q96SL8 496 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 ACBD6Q9BR61 282 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 GTPBP2Q9BX10 602 aaKnown RBP10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 TMEM206Q9H813 350 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 UXTQ9UBK9 157 aaPredicted RBP10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 AGO2Q9UKV8 859 aaKnown RBP10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 L1RE1Q9UN81 338 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 PTPRDP23468 1912 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 TCHHQ07283 1943 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 PI4KAP42356 2102 aa10.87□□□□□ -0.67
NPLOC4-220ENST00000576940 KIAA1549LQ6ZVL6 1849 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 ADAMTS9Q9P2N4 1935 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 LEFTY2O00292 366 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 SCAMP3O14828 347 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 ALDH1A2O94788 518 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 KLF8O95600 359 aaPredicted RBP10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 NFATC1O95644 943 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 MRPS21P82921 87 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 ATP2C1P98194 919 aaPredicted RBP10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 MAP7D1Q3KQU3 841 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 INTS6LQ5JSJ4 861 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 SLC23A3Q6PIS1 610 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 PGBD3Q8N328 593 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 KCTD17Q8N5Z5 321 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 IL17RCQ8NAC3 791 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 ZSWIM2Q8NEG5 633 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 OR2I1PQ8NGU4 316 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 FAM84AQ96KN4 292 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 PKMYT1Q99640 499 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 RNF38Q9H0F5 515 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 PARVGQ9HBI0 331 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 BCCIPQ9P287 314 aaKnown RBP eCLIP10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 PILRBQ9UKJ0 227 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 ODF2LQ9ULJ1 636 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 ARHGAP26Q9UNA1 814 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 AGAP1Q9UPQ3 857 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 FREM2Q5SZK8 3169 aa10.86□□□□□ -0.67
NPLOC4-220ENST00000576940 FAM221BA6H8Z2 402 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 MYMKA6NI61 221 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 ADAM23O75077 832 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 ATP2C2O75185 946 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 ITGB3P05106 788 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 CFIP05156 583 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 KRT18P05783 430 aaKnown RBP10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 ADSSP30520 456 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 POLR2BP30876 1174 aaKnown RBP10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 ZNF131P52739 623 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 ATXN3P54252 364 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms