RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 FGF19O95750 216 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 ARSAP15289 507 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 PTPN1P18031 435 aaKnown RBP12.7□□□□□ -0.38
LITAF-219ENST00000576334 GRIK1P39086 918 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 KPNA1P52294 538 aaPredicted RBP12.7□□□□□ -0.38
LITAF-219ENST00000576334 RPL10AP62906 217 aaKnown RBP12.7□□□□□ -0.38
LITAF-219ENST00000576334 TNNC1P63316 161 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 CLDN10P78369 228 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 PNOCQ13519 176 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 NCOA4Q13772 614 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 Q6ZS52 159 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 CHFRQ96EP1 664 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 B3GNT5Q9BYG0 378 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 OSBPL6Q9BZF3 934 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 ZNF518BQ9C0D4 1074 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 SCAND2PQ9GZW5 306 aaPredicted RBP12.7□□□□□ -0.38
LITAF-219ENST00000576334 TRPV5Q9NQA5 729 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 HPS4Q9NQG7 708 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 GKN1Q9NS71 199 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 CGNQ9P2M7 1197 aaKnown RBP12.7□□□□□ -0.38
LITAF-219ENST00000576334 USP25Q9UHP3 1055 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 ATG2BQ96BY7 2078 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 A8MXQ7 604 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 F8VP50 259 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 SPECC1L-ADORA2AF8WAN1 911 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 MAN2B1O00754 1011 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 TACC1O75410 805 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 AKAP3O75969 853 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 TRIM49P0CI25 452 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 TRIM49CP0CI26 452 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 CHRNB1P11230 501 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 CTHP32929 405 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 AVPR1AP37288 418 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 ZXDBP98169 803 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 PON2Q15165 354 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 ZNF699Q32M78 642 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 MON1AQ86VX9 555 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 SLC9A9Q8IVB4 645 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 ADSSL1Q8N142 457 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 ARL14EPQ8N8R7 260 aaPredicted RBP12.69□□□□□ -0.38
LITAF-219ENST00000576334 GOLGA5Q8TBA6 731 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 MYCBPAPQ8TBZ2 947 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 SPATA18Q8TC71 538 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 MRPS31Q92665 395 aaKnown RBP12.69□□□□□ -0.38
LITAF-219ENST00000576334 E2F7Q96AV8 911 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 FUBP3Q96I24 572 aaKnown RBP eCLIP12.69□□□□□ -0.38
LITAF-219ENST00000576334 MYRFLQ96LU7 910 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 EBF3Q9H4W6 596 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 TDP1Q9NUW8 608 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 HMGXB4Q9UGU5 601 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 PTPRZ1P23471 2315 aaPredicted RBP12.69□□□□□ -0.38
LITAF-219ENST00000576334 ZNF292O60281 2723 aa12.69□□□□□ -0.38
LITAF-219ENST00000576334 SCAMP3O14828 347 aaKnown RBP12.68□□□□□ -0.38
LITAF-219ENST00000576334 MAGEA11P43364 429 aa12.68□□□□□ -0.38
LITAF-219ENST00000576334 RPS9P46781 194 aaKnown RBP12.68□□□□□ -0.38
LITAF-219ENST00000576334 SATB1Q01826 763 aa12.68□□□□□ -0.38
LITAF-219ENST00000576334 DMWDQ09019 674 aa12.68□□□□□ -0.38
LITAF-219ENST00000576334 IFRD2Q12894 506 aaPredicted RBP12.68□□□□□ -0.38
LITAF-219ENST00000576334 ARHGAP29Q52LW3 1261 aa12.68□□□□□ -0.38
LITAF-219ENST00000576334 C4orf50Q6ZRC1 276 aa12.68□□□□□ -0.38
LITAF-219ENST00000576334 PAQR9Q6ZVX9 377 aa12.68□□□□□ -0.38
LITAF-219ENST00000576334 SV2AQ7L0J3 742 aa12.68□□□□□ -0.38
LITAF-219ENST00000576334 FMR1NBQ8N0W7 255 aaPredicted RBP12.68□□□□□ -0.38
LITAF-219ENST00000576334 DCLK2Q8N568 766 aa12.68□□□□□ -0.38
LITAF-219ENST00000576334 CELF5Q8N6W0 485 aaKnown RBP12.68□□□□□ -0.38
LITAF-219ENST00000576334 B3GALNT2Q8NCR0 500 aa12.68□□□□□ -0.38
LITAF-219ENST00000576334 SYAP1Q96A49 352 aaPredicted RBP12.68□□□□□ -0.38
LITAF-219ENST00000576334 TRMT2BQ96GJ1 504 aaKnown RBP12.68□□□□□ -0.38
LITAF-219ENST00000576334 KCNK16Q96T55 309 aa12.68□□□□□ -0.38
LITAF-219ENST00000576334 NELL2Q99435 816 aa12.68□□□□□ -0.38
LITAF-219ENST00000576334 FAM83CQ9BQN1 747 aa12.68□□□□□ -0.38
LITAF-219ENST00000576334 MMRN2Q9H8L6 949 aa12.68□□□□□ -0.38
LITAF-219ENST00000576334 POLR3BQ9NW08 1133 aaPredicted RBP12.68□□□□□ -0.38
LITAF-219ENST00000576334 OBP2AQ9NY56 170 aa12.68□□□□□ -0.38
LITAF-219ENST00000576334 GCNT4Q9P109 453 aa12.68□□□□□ -0.38
LITAF-219ENST00000576334 TRAF3IP3Q9Y228 551 aa12.68□□□□□ -0.38
LITAF-219ENST00000576334 MRPS17Q9Y2R5 130 aaKnown RBP12.68□□□□□ -0.38
LITAF-219ENST00000576334 ATP6V1DQ9Y5K8 247 aa12.68□□□□□ -0.38
LITAF-219ENST00000576334 FAM186AA6NE01 2351 aa12.67□□□□□ -0.38
LITAF-219ENST00000576334 HELZP42694 1942 aaKnown RBP12.67□□□□□ -0.38
LITAF-219ENST00000576334 CALUO43852 315 aaPredicted RBP12.67□□□□□ -0.38
LITAF-219ENST00000576334 STAU1O95793 577 aaKnown RBP12.67□□□□□ -0.38
LITAF-219ENST00000576334 HLA-DRAP01903 254 aa12.67□□□□□ -0.38
LITAF-219ENST00000576334 MYL1P05976 194 aa12.67□□□□□ -0.38
LITAF-219ENST00000576334 NR2F2P24468 414 aa12.67□□□□□ -0.38
LITAF-219ENST00000576334 WEE1P30291 646 aa12.67□□□□□ -0.38
LITAF-219ENST00000576334 ATICP31939 592 aa12.67□□□□□ -0.38
LITAF-219ENST00000576334 GCLMP48507 274 aa12.67□□□□□ -0.38
LITAF-219ENST00000576334 PPP3CAQ08209 521 aa12.67□□□□□ -0.38
LITAF-219ENST00000576334 ZACNQ401N2 412 aa12.67□□□□□ -0.38
LITAF-219ENST00000576334 ZNF667Q5HYK9 610 aa12.67□□□□□ -0.38
LITAF-219ENST00000576334 PKN3Q6P5Z2 889 aa12.67□□□□□ -0.38
LITAF-219ENST00000576334 VSTM1Q6UX27 236 aa12.67□□□□□ -0.38
LITAF-219ENST00000576334 ACOT1Q86TX2 421 aa12.67□□□□□ -0.38
LITAF-219ENST00000576334 RNF38Q9H0F5 515 aa12.67□□□□□ -0.38
LITAF-219ENST00000576334 CHRDQ9H2X0 955 aa12.67□□□□□ -0.38
LITAF-219ENST00000576334 APOBEC3GQ9HC16 384 aaKnown RBP12.67□□□□□ -0.38
LITAF-219ENST00000576334 FBRSL1Q9HCM7 1045 aaKnown RBP12.67□□□□□ -0.38
LITAF-219ENST00000576334 WNT6Q9Y6F9 365 aa12.67□□□□□ -0.38
LITAF-219ENST00000576334 EP300Q09472 2414 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms