RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 FILIP1Q7Z7B0 1213 aa16.23■□□□□ 0.19
SMG6-220ENST00000576218 UNC93AQ86WB7 457 aa16.23■□□□□ 0.19
SMG6-220ENST00000576218 GPIHBP1Q8IV16 184 aa16.23■□□□□ 0.19
SMG6-220ENST00000576218 ARID3BQ8IVW6 561 aaPredicted RBP16.23■□□□□ 0.19
SMG6-220ENST00000576218 MAB21L3Q8N8X9 362 aa16.23■□□□□ 0.19
SMG6-220ENST00000576218 ZNF518BQ9C0D4 1074 aa16.23■□□□□ 0.19
SMG6-220ENST00000576218 SDCBP2Q9H190 292 aa16.23■□□□□ 0.19
SMG6-220ENST00000576218 CLSTN2Q9H4D0 955 aa16.23■□□□□ 0.19
SMG6-220ENST00000576218 TBC1D17Q9HA65 648 aa16.23■□□□□ 0.19
SMG6-220ENST00000576218 CYP3A43Q9HB55 503 aa16.23■□□□□ 0.19
SMG6-220ENST00000576218 TRIOO75962 3097 aa16.22■□□□□ 0.19
SMG6-220ENST00000576218 HEPACAM2A8MVW5 462 aa16.22■□□□□ 0.19
SMG6-220ENST00000576218 CLDN5O00501 218 aa16.22■□□□□ 0.19
SMG6-220ENST00000576218 ZNF263O14978 683 aa16.22■□□□□ 0.19
SMG6-220ENST00000576218 NOL4O94818 638 aa16.22■□□□□ 0.19
SMG6-220ENST00000576218 GNA14O95837 355 aa16.22■□□□□ 0.19
SMG6-220ENST00000576218 BMP6P22004 513 aa16.22■□□□□ 0.19
SMG6-220ENST00000576218 FCARP24071 287 aa16.22■□□□□ 0.19
SMG6-220ENST00000576218 VCPP55072 806 aaKnown RBP16.22■□□□□ 0.19
SMG6-220ENST00000576218 FAM35AQ86V20 835 aa16.22■□□□□ 0.19
SMG6-220ENST00000576218 ZC3H3Q8IXZ2 948 aaKnown RBP16.22■□□□□ 0.19
SMG6-220ENST00000576218 IRF7Q92985 503 aa16.22■□□□□ 0.19
SMG6-220ENST00000576218 TRMT2BQ96GJ1 504 aaKnown RBP16.22■□□□□ 0.19
SMG6-220ENST00000576218 SMARCD1Q96GM5 515 aa16.22■□□□□ 0.19
SMG6-220ENST00000576218 SPATA17Q96L03 361 aa16.22■□□□□ 0.19
SMG6-220ENST00000576218 NT5C1AQ9BXI3 368 aa16.22■□□□□ 0.19
SMG6-220ENST00000576218 B3GNT5Q9BYG0 378 aa16.22■□□□□ 0.19
SMG6-220ENST00000576218 PLA2G2FQ9BZM2 168 aa16.22■□□□□ 0.19
SMG6-220ENST00000576218 APOBEC3GQ9HC16 384 aaKnown RBP16.22■□□□□ 0.19
SMG6-220ENST00000576218 KRT82Q9NSB4 513 aa16.22■□□□□ 0.19
SMG6-220ENST00000576218 FAM49BQ9NUQ9 324 aa16.22■□□□□ 0.19
SMG6-220ENST00000576218 AP1G2O75843 785 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 ABL1P00519 1130 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 CKMP06732 381 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 CCDC192P0DO97 292 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 HMGA1P17096 107 aaKnown RBP16.21■□□□□ 0.19
SMG6-220ENST00000576218 ADORA2BP29275 332 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 AVPR2P30518 371 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 MLF2Q15773 248 aaPredicted RBP16.21■□□□□ 0.19
SMG6-220ENST00000576218 CBWD6Q4V339 395 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 CBWD3Q5JTY5 395 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 CBWD5Q5RIA9 395 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 TXNDC8Q6A555 127 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 TTI2Q6NXR4 508 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 VITQ6UXI7 678 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 TTC39CQ8N584 583 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 CSGALNACT1Q8TDX6 532 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 C8orf48Q96LL4 319 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 CEP295NLQ96MC4 621 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 SLITRK1Q96PX8 696 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 PRRX2Q99811 253 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 DUSP9Q99956 384 aaKnown RBP16.21■□□□□ 0.19
SMG6-220ENST00000576218 SRRTQ9BXP5 876 aaKnown RBP16.21■□□□□ 0.19
SMG6-220ENST00000576218 BCO2Q9BYV7 579 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 TRPV4Q9HBA0 871 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 IL21Q9HBE4 155 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 DMAP1Q9NPF5 467 aaPredicted RBP16.21■□□□□ 0.19
SMG6-220ENST00000576218 THG1LQ9NWX6 298 aaKnown RBP16.21■□□□□ 0.19
SMG6-220ENST00000576218 TRPM5Q9NZQ8 1165 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 HMGXB4Q9UGU5 601 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 DACH1Q9UI36 760 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 NME7Q9Y5B8 376 aa16.21■□□□□ 0.19
SMG6-220ENST00000576218 TRAV19A0A0A6YYK7 116 aa16.2■□□□□ 0.18
SMG6-220ENST00000576218 KRBA1A5PL33 1030 aa16.2■□□□□ 0.18
SMG6-220ENST00000576218 F11P03951 625 aa16.2■□□□□ 0.18
SMG6-220ENST00000576218 FAM200BP0CF97 657 aa16.2■□□□□ 0.18
SMG6-220ENST00000576218 CCDC130P13994 396 aa16.2■□□□□ 0.18
SMG6-220ENST00000576218 PDE6CP51160 858 aa16.2■□□□□ 0.18
SMG6-220ENST00000576218 YWHAEP62258 255 aaKnown RBP16.2■□□□□ 0.18
SMG6-220ENST00000576218 LRMPQ12912 555 aa16.2■□□□□ 0.18
SMG6-220ENST00000576218 UBXN2BQ14CS0 331 aa16.2■□□□□ 0.18
SMG6-220ENST00000576218 SLC44A4Q53GD3 710 aa16.2■□□□□ 0.18
SMG6-220ENST00000576218 ZNF394Q53GI3 561 aa16.2■□□□□ 0.18
SMG6-220ENST00000576218 CC2D1AQ6P1N0 951 aaPredicted RBP16.2■□□□□ 0.18
SMG6-220ENST00000576218 TPRG1Q6ZUI0 275 aa16.2■□□□□ 0.18
SMG6-220ENST00000576218 MFSD6LQ8IWD5 586 aa16.2■□□□□ 0.18
SMG6-220ENST00000576218 CMTM8Q8IZV2 173 aa16.2■□□□□ 0.18
SMG6-220ENST00000576218 CELF5Q8N6W0 485 aaKnown RBP16.2■□□□□ 0.18
SMG6-220ENST00000576218 SLC2A14Q8TDB8 520 aa16.2■□□□□ 0.18
SMG6-220ENST00000576218 SEMA4DQ92854 862 aa16.2■□□□□ 0.18
SMG6-220ENST00000576218 DNASE1L2Q92874 299 aa16.2■□□□□ 0.18
SMG6-220ENST00000576218 SLC35C1Q96A29 364 aa16.2■□□□□ 0.18
SMG6-220ENST00000576218 SMG9Q9H0W8 520 aaKnown RBP16.2■□□□□ 0.18
SMG6-220ENST00000576218 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.2■□□□□ 0.18
SMG6-220ENST00000576218 ZDBF2Q9HCK1 2354 aa16.2■□□□□ 0.18
SMG6-220ENST00000576218 RTN3O95197 1032 aaPredicted RBP16.19■□□□□ 0.18
SMG6-220ENST00000576218 PRAMEF12O95522 483 aa16.19■□□□□ 0.18
SMG6-220ENST00000576218 AOC1P19801 751 aa16.19■□□□□ 0.18
SMG6-220ENST00000576218 FMO5P49326 533 aa16.19■□□□□ 0.18
SMG6-220ENST00000576218 CLCN5P51795 746 aa16.19■□□□□ 0.18
SMG6-220ENST00000576218 PRKCQQ04759 706 aa16.19■□□□□ 0.18
SMG6-220ENST00000576218 INCA1Q0VD86 236 aa16.19■□□□□ 0.18
SMG6-220ENST00000576218 FOXR2Q6PJQ5 311 aa16.19■□□□□ 0.18
SMG6-220ENST00000576218 POTEHQ6S545 545 aa16.19■□□□□ 0.18
SMG6-220ENST00000576218 CLEC17AQ6ZS10 378 aa16.19■□□□□ 0.18
SMG6-220ENST00000576218 MLKLQ8NB16 471 aa16.19■□□□□ 0.18
SMG6-220ENST00000576218 BPIFB1Q8TDL5 484 aa16.19■□□□□ 0.18
SMG6-220ENST00000576218 FBXO32Q969P5 355 aa16.19■□□□□ 0.18
SMG6-220ENST00000576218 JAKMIP2Q96AA8 810 aa16.19■□□□□ 0.18
SMG6-220ENST00000576218 MYRFLQ96LU7 910 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms