RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 HELZ2Q9BYK8 2649 aaKnown RBP6.35□□□□□ -1.39
SMG6-219ENST00000575663 IGHV1OR15-9A0A0B4J2B8 117 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 GOLGA8CPA6NN73 597 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 MEI4A8MW99 385 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 ERVH48-1M5A8F1 160 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 ABLIM1O14639 778 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 SLC9A3R1O14745 358 aaPredicted RBP6.35□□□□□ -1.39
SMG6-219ENST00000575663 CLDN3O15551 220 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 NDUFS2O75306 463 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 PRPF40AO75400 957 aaKnown RBP6.35□□□□□ -1.39
SMG6-219ENST00000575663 TADA3O75528 432 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 ADH1CP00326 375 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 CLTAP09496 248 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 ZNF883P0CG24 379 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 HOXB2P14652 356 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 HNRNPLP14866 589 aaKnown RBP eCLIP6.35□□□□□ -1.39
SMG6-219ENST00000575663 HMGA1P17096 107 aaKnown RBP6.35□□□□□ -1.39
SMG6-219ENST00000575663 RPA1P27694 616 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 HNF1BP35680 557 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 GRIA2P42262 883 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 MATKP42679 507 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 LILRA4P59901 499 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 RPL10AP62906 217 aaKnown RBP6.35□□□□□ -1.39
SMG6-219ENST00000575663 KCNC4Q03721 635 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 KDSRQ06136 332 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 SPAG1Q07617 926 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 MCL1Q07820 350 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 STK3Q13188 491 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 SUZ12Q15022 739 aaKnown RBP6.35□□□□□ -1.39
SMG6-219ENST00000575663 NFE2Q16621 373 aaPredicted RBP6.35□□□□□ -1.39
SMG6-219ENST00000575663 SEZ6Q53EL9 994 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 TAF1BQ53T94 588 aaPredicted RBP6.35□□□□□ -1.39
SMG6-219ENST00000575663 EARS2Q5JPH6 523 aaKnown RBP6.35□□□□□ -1.39
SMG6-219ENST00000575663 C6orf118Q5T5N4 469 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 GPR155Q7Z3F1 870 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 ZNF513Q8N8E2 541 aaPredicted RBP6.35□□□□□ -1.39
SMG6-219ENST00000575663 KIAA1958Q8N8K9 716 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 ARL14EPQ8N8R7 260 aaPredicted RBP6.35□□□□□ -1.39
SMG6-219ENST00000575663 KCNV2Q8TDN2 545 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 BICD1Q96G01 975 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 ZNF274Q96GC6 653 aaPredicted RBP6.35□□□□□ -1.39
SMG6-219ENST00000575663 TRMT2BQ96GJ1 504 aaKnown RBP6.35□□□□□ -1.39
SMG6-219ENST00000575663 BHMT2Q9H2M3 363 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 C17orf75Q9HAS0 396 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 ARHGEF4Q9NR80 690 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 TM7SF3Q9NS93 570 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 KCNG1Q9UIX4 513 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 ARHGAP26Q9UNA1 814 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 CYP8B1Q9UNU6 501 aa6.35□□□□□ -1.39
SMG6-219ENST00000575663 NUP205Q92621 2012 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 A0A1B0GTW7 788 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 TTC26A0AVF1 554 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 FAM205CA6NFA0 338 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 ADAM23O75077 832 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 NOL4O94818 638 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 DKK1O94907 266 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 CYP17A1P05093 508 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 ADH5P11766 374 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 PFKLP17858 780 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 GABRG2P18507 467 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 ITPKBP27987 946 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 EIF2S3P41091 472 aaKnown RBP6.34□□□□□ -1.39
SMG6-219ENST00000575663 TNFRSF4P43489 277 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 KIR2DL1P43626 348 aaPredicted RBP6.34□□□□□ -1.39
SMG6-219ENST00000575663 TAF6P49848 677 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 GUCY2FP51841 1108 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 CDR1P51861 262 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 SMTNP53814 917 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 SCRN1Q12765 414 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 NR5A1Q13285 461 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 CAMK2BQ13554 666 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 SMAD1Q15797 465 aaKnown RBP6.34□□□□□ -1.39
SMG6-219ENST00000575663 INAVAQ3KP66 663 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 BMP2KLQ5H9B9 411 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 SPATA1Q5VX52 437 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 ZPBP2Q6X784 338 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 TAS1R3Q7RTX0 852 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 SLC41A1Q8IVJ1 513 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 CD302Q8IX05 232 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 BAHD1Q8TBE0 780 aaPredicted RBP6.34□□□□□ -1.39
SMG6-219ENST00000575663 LEO1Q8WVC0 666 aaPredicted RBP6.34□□□□□ -1.39
SMG6-219ENST00000575663 KCNB2Q92953 911 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 MTMR9Q96QG7 549 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 ARID3AQ99856 593 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 PYM1Q9BRP8 204 aaKnown RBP6.34□□□□□ -1.39
SMG6-219ENST00000575663 LINC00597Q9H2U6 94 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 GAREM1Q9H706 876 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 RPF1Q9H9Y2 349 aaKnown RBP6.34□□□□□ -1.39
SMG6-219ENST00000575663 PRDM16Q9HAZ2 1276 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 IGSF5Q9NSI5 407 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 TOR4AQ9NXH8 423 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 NFE2L3Q9Y4A8 694 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 PCDHGB2Q9Y5G2 931 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 SNX14Q9Y5W7 946 aa6.34□□□□□ -1.39
SMG6-219ENST00000575663 CACNA1EQ15878 2313 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 PCDH15Q96QU1 1955 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 ASCC3Q8N3C0 2202 aaKnown RBP6.33□□□□□ -1.4
SMG6-219ENST00000575663 FAM149AA5PLN7 773 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 TBC1D3BA6NDS4 549 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 H0YCG3 227 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms