RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 TOB1P50616 345 aaPredicted RBP9.67□□□□□ -0.86
SMG6-218ENST00000575454 ZNF131P52739 623 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 SEC13P55735 322 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 GTF2BQ00403 316 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 GFPT1Q06210 699 aaPredicted RBP9.67□□□□□ -0.86
SMG6-218ENST00000575454 POSTNQ15063 836 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 IL17AQ16552 155 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 DDR2Q16832 855 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 ZNF423Q2M1K9 1284 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 CFAP221Q4G0U5 840 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 RILPL1Q5EBL4 403 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 ARSHQ5FYA8 562 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 EOGTQ5NDL2 527 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 LYSMD4Q5XG99 296 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 KIAA1211LQ6NV74 962 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 PIP4P1Q86T03 277 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 TTC30AQ86WT1 665 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 CCDC83Q8IWF9 413 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 MDGA1Q8NFP4 955 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 FUBP3Q96I24 572 aaKnown RBP eCLIP9.67□□□□□ -0.86
SMG6-218ENST00000575454 ZSCAN31Q96LW9 406 aaPredicted RBP9.67□□□□□ -0.86
SMG6-218ENST00000575454 AK8Q96MA6 479 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 PNMA5Q96PV4 448 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 CYP2S1Q96SQ9 504 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.67□□□□□ -0.86
SMG6-218ENST00000575454 AGO2Q9UKV8 859 aaKnown RBP9.67□□□□□ -0.86
SMG6-218ENST00000575454 CIZ1Q9ULV3 898 aaPredicted RBP9.67□□□□□ -0.86
SMG6-218ENST00000575454 SLC6A14Q9UN76 642 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 STYXL1Q9Y6J8 313 aa9.67□□□□□ -0.86
SMG6-218ENST00000575454 KALRNO60229 2985 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 COL4A2P08572 1712 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 NPHP3-ACAD11A0A0J9YXS1 232 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.66□□□□□ -0.86
SMG6-218ENST00000575454 TAF4O00268 1085 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 ZBTB24O43167 697 aaPredicted RBP9.66□□□□□ -0.86
SMG6-218ENST00000575454 AP5Z1O43299 807 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 OPHN1O60890 802 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 TBCAO75347 108 aaKnown RBP9.66□□□□□ -0.86
SMG6-218ENST00000575454 KRT18P05783 430 aaKnown RBP9.66□□□□□ -0.86
SMG6-218ENST00000575454 ENGP17813 658 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 BCKDHBP21953 392 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 CYP2F1P24903 491 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 GRIA2P42262 883 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 LHX1P48742 406 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 CDR1P51861 262 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 SEMA3BQ13214 749 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 PREPLQ4J6C6 727 aaPredicted RBP9.66□□□□□ -0.86
SMG6-218ENST00000575454 TMEM119Q4V9L6 283 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 INTS6LQ5JSJ4 861 aaKnown RBP9.66□□□□□ -0.86
SMG6-218ENST00000575454 ARL6IP4Q66PJ3 421 aaKnown RBP9.66□□□□□ -0.86
SMG6-218ENST00000575454 SLC36A4Q6YBV0 504 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 C4orf50Q6ZRC1 276 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 NUDT18Q6ZVK8 323 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 SPATA2LQ8IUW3 424 aaPredicted RBP9.66□□□□□ -0.86
SMG6-218ENST00000575454 PDCL2Q8N4E4 241 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 ARL14EPQ8N8R7 260 aaPredicted RBP9.66□□□□□ -0.86
SMG6-218ENST00000575454 KCNV2Q8TDN2 545 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 CACTINQ8WUQ7 758 aaKnown RBP9.66□□□□□ -0.86
SMG6-218ENST00000575454 CALML4Q96GE6 196 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 PNKPQ96T60 521 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 PLIN2Q99541 437 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 REEP2Q9BRK0 252 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 LINC00597Q9H2U6 94 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 TMLHEQ9NVH6 421 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 DDX43Q9NXZ2 648 aaKnown RBP9.66□□□□□ -0.86
SMG6-218ENST00000575454 TRPM5Q9NZQ8 1165 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 GCNT4Q9P109 453 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 BCCIPQ9P287 314 aaKnown RBP eCLIP9.66□□□□□ -0.86
SMG6-218ENST00000575454 R3HCC1Q9Y3T6 440 aaKnown RBP9.66□□□□□ -0.86
SMG6-218ENST00000575454 KIF3AQ9Y496 699 aa9.66□□□□□ -0.86
SMG6-218ENST00000575454 TENM4Q6N022 2769 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 A0A0A0MRY4 1105 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 SPAARA0A1B0GVQ0 90 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 VWA3AA6NCI4 1184 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 TADA3O75528 432 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 ADH1CP00326 375 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 APODP05090 189 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 CFIP05156 583 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 SERPINF2P08697 491 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 OPRD1P41143 372 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 UBA7P41226 1012 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 PTGER3P43115 390 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 MAGEA11P43364 429 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 TNFRSF4P43489 277 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 GPR15P49685 360 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 ATP2C1P98194 919 aaPredicted RBP9.65□□□□□ -0.86
SMG6-218ENST00000575454 ST3GAL1Q11201 340 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 SLC14A1Q13336 389 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 MAPRE1Q15691 268 aaKnown RBP9.65□□□□□ -0.86
SMG6-218ENST00000575454 DUOXA1Q1HG43 343 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 SDHAF4Q5VUM1 108 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 PEAR1Q5VY43 1037 aaPredicted RBP9.65□□□□□ -0.86
SMG6-218ENST00000575454 SLC39A4Q6P5W5 647 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 VSTM1Q6UX27 236 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 TRMT11Q7Z4G4 463 aaKnown RBP9.65□□□□□ -0.86
SMG6-218ENST00000575454 GPBP1Q86WP2 473 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 PROSER1Q86XN7 944 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 TMEFF1Q8IYR6 380 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 ADGRG2Q8IZP9 1017 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms