RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 EBLN1P0CF75 366 aa5.9□□□□□ -1.46
CDC27-216ENST00000574304 WT1P19544 449 aaPredicted RBP5.9□□□□□ -1.46
CDC27-216ENST00000574304 GPD1P21695 349 aa5.9□□□□□ -1.46
CDC27-216ENST00000574304 PCSK6P29122 969 aa5.9□□□□□ -1.46
CDC27-216ENST00000574304 DGKEP52429 567 aa5.9□□□□□ -1.46
CDC27-216ENST00000574304 FAM193AP78312 1265 aa5.9□□□□□ -1.46
CDC27-216ENST00000574304 CNGA2Q16280 664 aa5.9□□□□□ -1.46
CDC27-216ENST00000574304 ZIK1Q3SY52 487 aaPredicted RBP5.9□□□□□ -1.46
CDC27-216ENST00000574304 PLA1AQ53H76 456 aa5.9□□□□□ -1.46
CDC27-216ENST00000574304 DCAF12L1Q5VU92 463 aa5.9□□□□□ -1.46
CDC27-216ENST00000574304 DPY19L2P1Q6NXN4 242 aa5.9□□□□□ -1.46
CDC27-216ENST00000574304 RASAL3Q86YV0 1011 aa5.9□□□□□ -1.46
CDC27-216ENST00000574304 SLC15A3Q8IY34 581 aa5.9□□□□□ -1.46
CDC27-216ENST00000574304 RAPGEF4Q8WZA2 1011 aa5.9□□□□□ -1.46
CDC27-216ENST00000574304 A1CFQ9NQ94 594 aaKnown RBP5.9□□□□□ -1.46
CDC27-216ENST00000574304 SACM1LQ9NTJ5 587 aa5.9□□□□□ -1.46
CDC27-216ENST00000574304 SERTAD4Q9NUC0 356 aa5.9□□□□□ -1.46
CDC27-216ENST00000574304 ZSCAN32Q9NX65 697 aa5.9□□□□□ -1.46
CDC27-216ENST00000574304 COL11A2P13942 1736 aaPredicted RBP5.89□□□□□ -1.47
CDC27-216ENST00000574304 TRIM43BA6NCK2 446 aa5.89□□□□□ -1.47
CDC27-216ENST00000574304 MGEA5O60502 916 aa5.89□□□□□ -1.47
CDC27-216ENST00000574304 CSF1RP07333 972 aa5.89□□□□□ -1.47
CDC27-216ENST00000574304 IL6RP08887 468 aaPredicted RBP5.89□□□□□ -1.47
CDC27-216ENST00000574304 JUPP14923 745 aa5.89□□□□□ -1.47
CDC27-216ENST00000574304 ITPKBP27987 946 aa5.89□□□□□ -1.47
CDC27-216ENST00000574304 LIPAP38571 399 aa5.89□□□□□ -1.47
CDC27-216ENST00000574304 ALDH9A1P49189 494 aa5.89□□□□□ -1.47
CDC27-216ENST00000574304 PDE6CP51160 858 aa5.89□□□□□ -1.47
CDC27-216ENST00000574304 CLCN2P51788 898 aa5.89□□□□□ -1.47
CDC27-216ENST00000574304 SOX10P56693 466 aa5.89□□□□□ -1.47
CDC27-216ENST00000574304 FMO1Q01740 532 aa5.89□□□□□ -1.47
CDC27-216ENST00000574304 GALEQ14376 348 aa5.89□□□□□ -1.47
CDC27-216ENST00000574304 POLD3Q15054 466 aaPredicted RBP5.89□□□□□ -1.47
CDC27-216ENST00000574304 TREML2Q5T2D2 321 aa5.89□□□□□ -1.47
CDC27-216ENST00000574304 MICU3Q86XE3 530 aa5.89□□□□□ -1.47
CDC27-216ENST00000574304 ZNF575Q86XF7 245 aa5.89□□□□□ -1.47
CDC27-216ENST00000574304 OR56A3Q8NH54 315 aa5.89□□□□□ -1.47
CDC27-216ENST00000574304 TRIM43Q96BQ3 446 aaPredicted RBP5.89□□□□□ -1.47
CDC27-216ENST00000574304 SARAFQ96BY9 339 aa5.89□□□□□ -1.47
CDC27-216ENST00000574304 ZNF764Q96H86 408 aaPredicted RBP5.89□□□□□ -1.47
CDC27-216ENST00000574304 LRRC27Q9C0I9 530 aa5.89□□□□□ -1.47
CDC27-216ENST00000574304 GLOD4Q9HC38 313 aa5.89□□□□□ -1.47
CDC27-216ENST00000574304 ARPP21Q9UBL0 812 aaPredicted RBP5.89□□□□□ -1.47
CDC27-216ENST00000574304 AFF4Q9UHB7 1163 aaKnown RBP5.89□□□□□ -1.47
CDC27-216ENST00000574304 OGDHLQ9ULD0 1010 aa5.89□□□□□ -1.47
CDC27-216ENST00000574304 LRRC3CA6NJW4 275 aa5.88□□□□□ -1.47
CDC27-216ENST00000574304 PROP1O75360 226 aa5.88□□□□□ -1.47
CDC27-216ENST00000574304 PARNO95453 639 aaKnown RBP5.88□□□□□ -1.47
CDC27-216ENST00000574304 MAP4K4O95819 1239 aaPredicted RBP5.88□□□□□ -1.47
CDC27-216ENST00000574304 ONECUT2O95948 504 aa5.88□□□□□ -1.47
CDC27-216ENST00000574304 C1RP00736 705 aa5.88□□□□□ -1.47
CDC27-216ENST00000574304 ERBB2P04626 1255 aa5.88□□□□□ -1.47
CDC27-216ENST00000574304 MYF5P13349 255 aa5.88□□□□□ -1.47
CDC27-216ENST00000574304 NDUFB7P17568 137 aa5.88□□□□□ -1.47
CDC27-216ENST00000574304 RHCEP18577 417 aa5.88□□□□□ -1.47
CDC27-216ENST00000574304 KCNA3P22001 575 aa5.88□□□□□ -1.47
CDC27-216ENST00000574304 CCT8P50990 548 aa5.88□□□□□ -1.47
CDC27-216ENST00000574304 ATXN1P54253 815 aaKnown RBP5.88□□□□□ -1.47
CDC27-216ENST00000574304 RHDQ02161 417 aa5.88□□□□□ -1.47
CDC27-216ENST00000574304 DEPDC1Q5TB30 811 aa5.88□□□□□ -1.47
CDC27-216ENST00000574304 AMIGO2Q86SJ2 522 aa5.88□□□□□ -1.47
CDC27-216ENST00000574304 BPIFB1Q8TDL5 484 aa5.88□□□□□ -1.47
CDC27-216ENST00000574304 ZNF384Q8TF68 577 aa5.88□□□□□ -1.47
CDC27-216ENST00000574304 GLG1Q92896 1179 aa5.88□□□□□ -1.47
CDC27-216ENST00000574304 TIFAQ96CG3 184 aa5.88□□□□□ -1.47
CDC27-216ENST00000574304 NMD3Q96D46 503 aaKnown RBP5.88□□□□□ -1.47
CDC27-216ENST00000574304 APIPQ96GX9 242 aa5.88□□□□□ -1.47
CDC27-216ENST00000574304 SH2B3Q9UQQ2 575 aa5.88□□□□□ -1.47
CDC27-216ENST00000574304 POLR2AP24928 1970 aaKnown RBP5.87□□□□□ -1.47
CDC27-216ENST00000574304 A1L4Q6 167 aa5.87□□□□□ -1.47
CDC27-216ENST00000574304 MBD3L4A6NDZ8 208 aaPredicted RBP5.87□□□□□ -1.47
CDC27-216ENST00000574304 MBD3L3A6NE82 208 aaPredicted RBP5.87□□□□□ -1.47
CDC27-216ENST00000574304 PYCARD-AS1I3L0S3 204 aa5.87□□□□□ -1.47
CDC27-216ENST00000574304 FESP07332 822 aa5.87□□□□□ -1.47
CDC27-216ENST00000574304 ZKSCAN1P17029 563 aaPredicted RBP5.87□□□□□ -1.47
CDC27-216ENST00000574304 DRD4P21917 467 aa5.87□□□□□ -1.47
CDC27-216ENST00000574304 PEX2P28328 305 aa5.87□□□□□ -1.47
CDC27-216ENST00000574304 ADORA2AP29274 412 aa5.87□□□□□ -1.47
CDC27-216ENST00000574304 PRKAG1P54619 331 aa5.87□□□□□ -1.47
CDC27-216ENST00000574304 C3orf38Q5JPI3 329 aa5.87□□□□□ -1.47
CDC27-216ENST00000574304 CYB5RLQ6IPT4 315 aa5.87□□□□□ -1.47
CDC27-216ENST00000574304 ZDHHC24Q6UX98 284 aa5.87□□□□□ -1.47
CDC27-216ENST00000574304 DGKHQ86XP1 1220 aa5.87□□□□□ -1.47
CDC27-216ENST00000574304 NTN5Q8WTR8 489 aaPredicted RBP5.87□□□□□ -1.47
CDC27-216ENST00000574304 OSCP1Q8WVF1 389 aa5.87□□□□□ -1.47
CDC27-216ENST00000574304 SPSB4Q96A44 273 aa5.87□□□□□ -1.47
CDC27-216ENST00000574304 ZNF287Q9HBT7 754 aa5.87□□□□□ -1.47
CDC27-216ENST00000574304 CHPF2Q9P2E5 772 aa5.87□□□□□ -1.47
CDC27-216ENST00000574304 ADAM21Q9UKJ8 722 aa5.87□□□□□ -1.47
CDC27-216ENST00000574304 TBC1D30Q9Y2I9 924 aa5.87□□□□□ -1.47
CDC27-216ENST00000574304 WNT6Q9Y6F9 365 aa5.87□□□□□ -1.47
CDC27-216ENST00000574304 FAM163BP0C2L3 166 aa5.86□□□□□ -1.47
CDC27-216ENST00000574304 FBLP22087 321 aaKnown RBP5.86□□□□□ -1.47
CDC27-216ENST00000574304 KLRC1P26715 233 aa5.86□□□□□ -1.47
CDC27-216ENST00000574304 CD38P28907 300 aa5.86□□□□□ -1.47
CDC27-216ENST00000574304 CYP2C18P33260 490 aa5.86□□□□□ -1.47
CDC27-216ENST00000574304 PDE1AP54750 535 aa5.86□□□□□ -1.47
CDC27-216ENST00000574304 RPS16P62249 146 aaKnown RBP5.86□□□□□ -1.47
CDC27-216ENST00000574304 NHLH1Q02575 133 aa5.86□□□□□ -1.47
CDC27-216ENST00000574304 SEMA5AQ13591 1074 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms