RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 SNX25Q9H3E2 840 aa12.1□□□□□ -0.47
RPAIN-214ENST00000574003 ABCB6Q9NP58 842 aa12.1□□□□□ -0.47
RPAIN-214ENST00000574003 GKN1Q9NS71 199 aa12.1□□□□□ -0.47
RPAIN-214ENST00000574003 C2orf42Q9NWW7 574 aa12.1□□□□□ -0.47
RPAIN-214ENST00000574003 SPTBN4Q9H254 2564 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 SDK1Q7Z5N4 2213 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 A0A1W2PQ27 194 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 A0A1W2PQ64 194 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 A0A1W2PQD8 194 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 C2orf78A6NCI8 922 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 F8VP50 259 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 TACC1O75410 805 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 RHOBTB3O94955 611 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 TRIM49P0CI25 452 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 TRIM49CP0CI26 452 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 CHRNB1P11230 501 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 ARSAP15289 507 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 PTPN1P18031 435 aaKnown RBP12.09□□□□□ -0.47
RPAIN-214ENST00000574003 CTHP32929 405 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 IFRD2Q12894 506 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-214ENST00000574003 PNOCQ13519 176 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 NCOA4Q13772 614 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 PON2Q15165 354 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 ZNF699Q32M78 642 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 CFAP221Q4G0U5 840 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 ARHGAP29Q52LW3 1261 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 C4orf50Q6ZRC1 276 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 Q6ZS52 159 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 MON1AQ86VX9 555 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 ADSSL1Q8N142 457 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 CELF5Q8N6W0 485 aaKnown RBP12.09□□□□□ -0.47
RPAIN-214ENST00000574003 ARL14EPQ8N8R7 260 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-214ENST00000574003 MYCBPAPQ8TBZ2 947 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 SPATA18Q8TC71 538 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 MRPS31Q92665 395 aaKnown RBP12.09□□□□□ -0.47
RPAIN-214ENST00000574003 EEF2KMTQ96G04 330 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 NELL2Q99435 816 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 B3GNT5Q9BYG0 378 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 SCAND2PQ9GZW5 306 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-214ENST00000574003 EBF3Q9H4W6 596 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 MMRN2Q9H8L6 949 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 TRPV5Q9NQA5 729 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 HPS4Q9NQG7 708 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 CGNQ9P2M7 1197 aaKnown RBP12.09□□□□□ -0.47
RPAIN-214ENST00000574003 HMGXB4Q9UGU5 601 aa12.09□□□□□ -0.47
RPAIN-214ENST00000574003 MRPS17Q9Y2R5 130 aaKnown RBP12.09□□□□□ -0.47
RPAIN-214ENST00000574003 A8MXQ7 604 aa12.08□□□□□ -0.48
RPAIN-214ENST00000574003 SPECC1L-ADORA2AF8WAN1 911 aa12.08□□□□□ -0.48
RPAIN-214ENST00000574003 MAN2B1O00754 1011 aa12.08□□□□□ -0.48
RPAIN-214ENST00000574003 PDXKO00764 312 aa12.08□□□□□ -0.48
RPAIN-214ENST00000574003 SCAMP3O14828 347 aaKnown RBP12.08□□□□□ -0.48
RPAIN-214ENST00000574003 AVPR1AP37288 418 aa12.08□□□□□ -0.48
RPAIN-214ENST00000574003 MAGEA11P43364 429 aa12.08□□□□□ -0.48
RPAIN-214ENST00000574003 SV2AQ7L0J3 742 aa12.08□□□□□ -0.48
RPAIN-214ENST00000574003 SLC9A9Q8IVB4 645 aa12.08□□□□□ -0.48
RPAIN-214ENST00000574003 DCLK2Q8N568 766 aa12.08□□□□□ -0.48
RPAIN-214ENST00000574003 GOLGA5Q8TBA6 731 aa12.08□□□□□ -0.48
RPAIN-214ENST00000574003 SYAP1Q96A49 352 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-214ENST00000574003 CHFRQ96EP1 664 aa12.08□□□□□ -0.48
RPAIN-214ENST00000574003 FUBP3Q96I24 572 aaKnown RBP eCLIP12.08□□□□□ -0.48
RPAIN-214ENST00000574003 MYRFLQ96LU7 910 aa12.08□□□□□ -0.48
RPAIN-214ENST00000574003 CHRDQ9H2X0 955 aa12.08□□□□□ -0.48
RPAIN-214ENST00000574003 TDP1Q9NUW8 608 aa12.08□□□□□ -0.48
RPAIN-214ENST00000574003 OBP2AQ9NY56 170 aa12.08□□□□□ -0.48
RPAIN-214ENST00000574003 WDR87Q6ZQQ6 2873 aa12.08□□□□□ -0.48
RPAIN-214ENST00000574003 NCAM2O15394 837 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 CALUO43852 315 aaPredicted RBP12.07□□□□□ -0.48
RPAIN-214ENST00000574003 AKAP3O75969 853 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 HLA-DRAP01903 254 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 NR2F2P24468 414 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 WEE1P30291 646 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 ATICP31939 592 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 RPS9P46781 194 aaKnown RBP12.07□□□□□ -0.48
RPAIN-214ENST00000574003 GCLMP48507 274 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 CLDN10P78369 228 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 ZXDBP98169 803 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 SATB1Q01826 763 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 PPP3CAQ08209 521 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 DMWDQ09019 674 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 ZACNQ401N2 412 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 ZNF667Q5HYK9 610 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 PKN3Q6P5Z2 889 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 B3GALNT2Q8NCR0 500 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 TRMT2BQ96GJ1 504 aaKnown RBP12.07□□□□□ -0.48
RPAIN-214ENST00000574003 FAM83CQ9BQN1 747 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 FBRSL1Q9HCM7 1045 aaKnown RBP12.07□□□□□ -0.48
RPAIN-214ENST00000574003 POLR3BQ9NW08 1133 aaPredicted RBP12.07□□□□□ -0.48
RPAIN-214ENST00000574003 GCNT4Q9P109 453 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 UXTQ9UBK9 157 aaPredicted RBP12.07□□□□□ -0.48
RPAIN-214ENST00000574003 TRAF3IP3Q9Y228 551 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 ATP6V1DQ9Y5K8 247 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 WNT6Q9Y6F9 365 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 MYH10P35580 1976 aa12.07□□□□□ -0.48
RPAIN-214ENST00000574003 MYOFQ9NZM1 2061 aa12.06□□□□□ -0.48
RPAIN-214ENST00000574003 TRAV19A0A0A6YYK7 116 aa12.06□□□□□ -0.48
RPAIN-214ENST00000574003 STAU1O95793 577 aaKnown RBP12.06□□□□□ -0.48
RPAIN-214ENST00000574003 ABL1P00519 1130 aa12.06□□□□□ -0.48
RPAIN-214ENST00000574003 MYL1P05976 194 aa12.06□□□□□ -0.48
RPAIN-214ENST00000574003 CKMP06732 381 aa12.06□□□□□ -0.48
RPAIN-214ENST00000574003 CCDC130P13994 396 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms