RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 CENPFP49454 3210 aa30.65■■■□□ 2.5
CTDNEP1-208ENST00000573600 CCL5P13501 91 aa30.65■■■□□ 2.5
CTDNEP1-208ENST00000573600 PTPN1P18031 435 aaKnown RBP30.65■■■□□ 2.5
CTDNEP1-208ENST00000573600 RGS7P49802 495 aa30.65■■■□□ 2.5
CTDNEP1-208ENST00000573600 MTFR1Q15390 333 aa30.65■■■□□ 2.5
CTDNEP1-208ENST00000573600 POLNQ7Z5Q5 900 aa30.65■■■□□ 2.5
CTDNEP1-208ENST00000573600 CCDC50Q8IVM0 306 aa30.65■■■□□ 2.5
CTDNEP1-208ENST00000573600 PRELID2Q8N945 189 aa30.65■■■□□ 2.5
CTDNEP1-208ENST00000573600 C3orf58Q8NDZ4 430 aa30.65■■■□□ 2.5
CTDNEP1-208ENST00000573600 SLC2A14Q8TDB8 520 aa30.65■■■□□ 2.5
CTDNEP1-208ENST00000573600 FUT8Q9BYC5 575 aa30.65■■■□□ 2.5
CTDNEP1-208ENST00000573600 RNF208Q9H0X6 261 aa30.65■■■□□ 2.5
CTDNEP1-208ENST00000573600 DDX43Q9NXZ2 648 aaKnown RBP30.65■■■□□ 2.5
CTDNEP1-208ENST00000573600 ACADSBP45954 432 aa30.64■■■□□ 2.5
CTDNEP1-208ENST00000573600 RPL34P49207 117 aaKnown RBP30.64■■■□□ 2.5
CTDNEP1-208ENST00000573600 HADHQ16836 314 aaKnown RBP30.64■■■□□ 2.5
CTDNEP1-208ENST00000573600 GLB1LQ6UWU2 654 aa30.64■■■□□ 2.5
CTDNEP1-208ENST00000573600 EIF1ADQ8N9N8 165 aaKnown RBP30.64■■■□□ 2.5
CTDNEP1-208ENST00000573600 ASNSD1Q9NWL6 643 aa30.64■■■□□ 2.5
CTDNEP1-208ENST00000573600 TULP2O00295 520 aa30.64■■■□□ 2.5
CTDNEP1-208ENST00000573600 ODC1P11926 461 aa30.64■■■□□ 2.5
CTDNEP1-208ENST00000573600 SLC8A3P57103 927 aa30.64■■■□□ 2.5
CTDNEP1-208ENST00000573600 SLC6A3Q01959 620 aa30.64■■■□□ 2.5
CTDNEP1-208ENST00000573600 EMC1Q8N766 993 aa30.64■■■□□ 2.5
CTDNEP1-208ENST00000573600 C12orf50Q8NA57 414 aaPredicted RBP30.64■■■□□ 2.5
CTDNEP1-208ENST00000573600 MAGOHBQ96A72 148 aaKnown RBP30.64■■■□□ 2.5
CTDNEP1-208ENST00000573600 HSFY1Q96LI6 401 aa30.64■■■□□ 2.5
CTDNEP1-208ENST00000573600 HTTP42858 3142 aa30.63■■■□□ 2.49
CTDNEP1-208ENST00000573600 FAM187AA6NFU0 413 aa30.63■■■□□ 2.49
CTDNEP1-208ENST00000573600 BHMG1C9JSJ3 638 aaPredicted RBP30.63■■■□□ 2.49
CTDNEP1-208ENST00000573600 PITPNM1O00562 1244 aa30.63■■■□□ 2.49
CTDNEP1-208ENST00000573600 MYBL2P10244 700 aa30.63■■■□□ 2.49
CTDNEP1-208ENST00000573600 RARAP10276 462 aa30.63■■■□□ 2.49
CTDNEP1-208ENST00000573600 COL6A1P12109 1028 aa30.63■■■□□ 2.49
CTDNEP1-208ENST00000573600 GPD1P21695 349 aa30.63■■■□□ 2.49
CTDNEP1-208ENST00000573600 IGFBP6P24592 240 aaPredicted RBP30.63■■■□□ 2.49
CTDNEP1-208ENST00000573600 GJC1P36383 396 aa30.63■■■□□ 2.49
CTDNEP1-208ENST00000573600 EPHB4P54760 987 aa30.63■■■□□ 2.49
CTDNEP1-208ENST00000573600 COPS2P61201 443 aa30.63■■■□□ 2.49
CTDNEP1-208ENST00000573600 SIX1Q15475 284 aaPredicted RBP30.63■■■□□ 2.49
CTDNEP1-208ENST00000573600 AENQ8WTP8 325 aaKnown RBP30.63■■■□□ 2.49
CTDNEP1-208ENST00000573600 LINC01599Q8WXQ3 324 aa30.63■■■□□ 2.49
CTDNEP1-208ENST00000573600 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP30.63■■■□□ 2.493e-10■■■■■ 88.3
CTDNEP1-208ENST00000573600 HINFPQ9BQA5 517 aa30.63■■■□□ 2.49
CTDNEP1-208ENST00000573600 PAAF1Q9BRP4 392 aa30.63■■■□□ 2.49
CTDNEP1-208ENST00000573600 PCYOX1Q9UHG3 505 aa30.63■■■□□ 2.49
CTDNEP1-208ENST00000573600 ARHGEF37A1IGU5 675 aa30.62■■■□□ 2.49
CTDNEP1-208ENST00000573600 RNF8O76064 485 aa30.62■■■□□ 2.49
CTDNEP1-208ENST00000573600 KRT7P08729 469 aa30.62■■■□□ 2.49
CTDNEP1-208ENST00000573600 SCNN1AP37088 669 aa30.62■■■□□ 2.49
CTDNEP1-208ENST00000573600 PLA2G4AP47712 749 aa30.62■■■□□ 2.49
CTDNEP1-208ENST00000573600 ZNF143P52747 638 aaPredicted RBP30.62■■■□□ 2.49
CTDNEP1-208ENST00000573600 DR1Q01658 176 aa30.62■■■□□ 2.49
CTDNEP1-208ENST00000573600 TIGD5Q53EQ6 642 aa30.62■■■□□ 2.49
CTDNEP1-208ENST00000573600 OLFML1Q6UWY5 402 aa30.62■■■□□ 2.49
CTDNEP1-208ENST00000573600 ZDHHC14Q8IZN3 488 aa30.62■■■□□ 2.49
CTDNEP1-208ENST00000573600 XPO1O14980 1071 aaKnown RBP30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 B3GAT3O94766 335 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 CUL1Q13616 776 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 SMC1AQ14683 1233 aaKnown RBP30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 ODF2Q5BJF6 829 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 DCLRE1AQ6PJP8 1040 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 URGCPQ8TCY9 931 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 DUSP16Q9BY84 665 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 RAB17Q9H0T7 212 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 LRRC19Q9H756 370 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 DSEQ9UL01 958 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 CDH9Q9ULB4 789 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 UTP11Q9Y3A2 253 aaKnown RBP30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 TCRBV7S2A1N4TA0A589 114 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 C2CD4BA6NLJ0 364 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 PIK3R2O00459 728 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 MAP2K7O14733 419 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 TTI1O43156 1089 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 RRP9O43818 475 aaKnown RBP30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 LRCH4O75427 683 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 MYCP01106 439 aaPredicted RBP30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 KRT1P04264 644 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 ACAT1P24752 427 aaKnown RBP30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 FNTAP49354 379 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 ZFYVE27Q5T4F4 411 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 EMBQ6PCB8 327 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 METTL23Q86XA0 190 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 FUKQ8N0W3 1084 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 CASKIN2Q8WXE0 1202 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 SYT15Q9BQS2 421 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 CNPY3Q9BT09 278 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 OSBPL8Q9BZF1 889 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 HOMER3Q9NSC5 361 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 KANSL3Q9P2N6 904 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 RASAL2Q9UJF2 1139 aa30.61■■■□□ 2.49
CTDNEP1-208ENST00000573600 ZSCAN5CA6NGD5 496 aaPredicted RBP30.6■■■□□ 2.49
CTDNEP1-208ENST00000573600 ATP2C2O75185 946 aa30.6■■■□□ 2.49
CTDNEP1-208ENST00000573600 CYP11A1P05108 521 aa30.6■■■□□ 2.49
CTDNEP1-208ENST00000573600 TCF4P15884 667 aa30.6■■■□□ 2.49
CTDNEP1-208ENST00000573600 PCSK1P29120 753 aa30.6■■■□□ 2.49
CTDNEP1-208ENST00000573600 PLCB3Q01970 1234 aa30.6■■■□□ 2.49
CTDNEP1-208ENST00000573600 PLEKHA4Q9H4M7 779 aa30.6■■■□□ 2.49
CTDNEP1-208ENST00000573600 ELAC1Q9H777 363 aaKnown RBP30.6■■■□□ 2.49
CTDNEP1-208ENST00000573600 PAPSS1O43252 624 aaPredicted RBP30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms