RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 FAM200BP0CF97 657 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 NPR3P17342 541 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 ACADSBP45954 432 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 GSCP56915 257 aaPredicted RBP14.45□□□□□ -0.1
CCDC40-209ENST00000573474 TAP1Q03518 808 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 USP41Q3LFD5 358 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 CTXN3Q4LDR2 81 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 CYP4A22Q5TCH4 519 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 ZNF280DQ6N043 979 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 PMF1Q6P1K2 205 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 DNAJC24Q6P3W2 148 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 SLFN11Q7Z7L1 901 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 TMEM110Q86TL2 294 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 TMEM173Q86WV6 379 aaPredicted RBP14.45□□□□□ -0.1
CCDC40-209ENST00000573474 SLC39A11Q8N1S5 342 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 FIBCD1Q8N539 461 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 COLGALT1Q8NBJ5 622 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 MYLPFQ96A32 169 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 PCED1BQ96HM7 432 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 HSFY1Q96LI6 401 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 TTPALQ9BTX7 342 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 UBXN6Q9BZV1 441 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 ZCWPW1Q9H0M4 648 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 ST7Q9NRC1 585 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 AAASQ9NRG9 546 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 SPG21Q9NZD8 308 aa14.45□□□□□ -0.1
CCDC40-209ENST00000573474 CHORDC1Q9UHD1 332 aaPredicted RBP14.45□□□□□ -0.1
CCDC40-209ENST00000573474 TSC2P49815 1807 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 TCRBV5S1A1TA0A578 114 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 TULP2O00295 520 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 BUB1BO60566 1050 aaPredicted RBP14.44□□□□□ -0.1
CCDC40-209ENST00000573474 AP1G2O75843 785 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 PLA2G4AP47712 749 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 RPL34P49207 117 aaKnown RBP14.44□□□□□ -0.1
CCDC40-209ENST00000573474 RGS7P49802 495 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 CCDC142Q17RM4 750 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 C11orf63Q6NUN7 778 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 C4orf50Q6ZRC1 276 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 ANKS3Q6ZW76 656 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 TAS1R1Q7RTX1 841 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 DAAM2Q86T65 1068 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 FAM35AQ86V20 835 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 LRRTM3Q86VH5 581 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 XYLT1Q86Y38 959 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 HERC6Q8IVU3 1022 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 C3orf20Q8ND61 904 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 FEZF2Q8TBJ5 459 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 UBE2Q2Q8WVN8 375 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 SMARCD1Q96GM5 515 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 TMEM209Q96SK2 561 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 RAD9AQ99638 391 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 LCMT1Q9UIC8 334 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 NR2E3Q9Y5X4 410 aa14.44□□□□□ -0.1
CCDC40-209ENST00000573474 TMEM191CA6NGB0 347 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 SIGLEC16A6NMB1 481 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 E5RJQ4 531 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 MYO1FO00160 1098 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 TBC1D4O60343 1298 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 ATP2A2P16615 1042 aaKnown RBP14.43□□□□□ -0.1
CCDC40-209ENST00000573474 PPM1AP35813 382 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 TUBB2AQ13885 445 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 NFE2Q16621 373 aaPredicted RBP14.43□□□□□ -0.1
CCDC40-209ENST00000573474 RTP2Q5QGT7 225 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 MEI1Q5TIA1 1274 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 PAPD7Q5XG87 772 aaKnown RBP14.43□□□□□ -0.1
CCDC40-209ENST00000573474 OR6B2Q6IFH4 312 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 LLGL2Q6P1M3 1020 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 CLEC20AQ6ZU45 233 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 ZDHHC17Q8IUH5 632 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 SPATA2LQ8IUW3 424 aaPredicted RBP14.43□□□□□ -0.1
CCDC40-209ENST00000573474 RNF168Q8IYW5 571 aaPredicted RBP14.43□□□□□ -0.1
CCDC40-209ENST00000573474 KCTD13Q8WZ19 329 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 MCRS1Q96EZ8 462 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 TMEM169Q96HH4 297 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 B3GALT6Q96L58 329 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 SMOQ99835 787 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 TUBB2BQ9BVA1 445 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 SELENOOQ9BVL4 669 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 ABCB6Q9NP58 842 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 CHST7Q9NS84 486 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 KRT82Q9NSB4 513 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 TMLHEQ9NVH6 421 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 TJP2Q9UDY2 1190 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 STK39Q9UEW8 545 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 ANAPC7Q9UJX3 599 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 AMFRQ9UKV5 643 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 PCDHB12Q9Y5F1 795 aa14.43□□□□□ -0.1
CCDC40-209ENST00000573474 GOLGA8SH3BPF8 625 aa14.42□□□□□ -0.1
CCDC40-209ENST00000573474 ENC1O14682 589 aa14.42□□□□□ -0.1
CCDC40-209ENST00000573474 URI1O94763 535 aaPredicted RBP14.42□□□□□ -0.1
CCDC40-209ENST00000573474 FTCDO95954 541 aa14.42□□□□□ -0.1
CCDC40-209ENST00000573474 SOD2P04179 222 aa14.42□□□□□ -0.1
CCDC40-209ENST00000573474 ATP1A1P05023 1023 aaKnown RBP14.42□□□□□ -0.1
CCDC40-209ENST00000573474 KRT3P12035 628 aa14.42□□□□□ -0.1
CCDC40-209ENST00000573474 BDNFP23560 247 aa14.42□□□□□ -0.1
CCDC40-209ENST00000573474 MAP3K7CLP57077 242 aa14.42□□□□□ -0.1
CCDC40-209ENST00000573474 SMARCB1Q12824 385 aa14.42□□□□□ -0.1
CCDC40-209ENST00000573474 MESDQ14696 234 aa14.42□□□□□ -0.1
CCDC40-209ENST00000573474 SLC39A12Q504Y0 691 aa14.42□□□□□ -0.1
CCDC40-209ENST00000573474 PPP1R15BQ5SWA1 713 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms