RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 GAREM2Q75VX8 874 aa9.7□□□□□ -0.86
NDE1-207ENST00000573203 LIMS2Q7Z4I7 341 aa9.7□□□□□ -0.86
NDE1-207ENST00000573203 OR6B3Q8NGW1 331 aa9.7□□□□□ -0.86
NDE1-207ENST00000573203 SPATA20Q8TB22 786 aa9.7□□□□□ -0.86
NDE1-207ENST00000573203 SHDQ96IW2 340 aa9.7□□□□□ -0.86
NDE1-207ENST00000573203 ABCB6Q9NP58 842 aa9.7□□□□□ -0.86
NDE1-207ENST00000573203 NXF1Q9UBU9 619 aaKnown RBP9.7□□□□□ -0.86
NDE1-207ENST00000573203 MAPK13O15264 365 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 PI15O43692 258 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 OBSL1O75147 1896 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 ATP2C2O75185 946 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 TACC1O75410 805 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 STAU1O95793 577 aaKnown RBP9.69□□□□□ -0.86
NDE1-207ENST00000573203 C4BPAP04003 597 aaKnown RBP9.69□□□□□ -0.86
NDE1-207ENST00000573203 FAM163BP0C2L3 166 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 KRT13P13646 458 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 PTPRDP23468 1912 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 VIPR2P41587 438 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 GPR15P49685 360 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 VAMP7P51809 220 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 DLG4P78352 724 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 CLDN10P78369 228 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 CYP4F8P98187 520 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 NHLH1Q02575 133 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 PRKCQQ04759 706 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 IQCB1Q15051 598 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 MLF2Q15773 248 aaPredicted RBP9.69□□□□□ -0.86
NDE1-207ENST00000573203 NFIL3Q16649 462 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 DDR2Q16832 855 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 CCDC142Q17RM4 750 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 ZNF699Q32M78 642 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 CFAP221Q4G0U5 840 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 ANO6Q4KMQ2 910 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 SLC44A4Q53GD3 710 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 ZNF667Q5HYK9 610 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 MIA3Q5JRA6 1907 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 STXBP5Q5T5C0 1151 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 SDHAF4Q5VUM1 108 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 PHLDB3Q6NSJ2 640 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 FAM171BQ6P995 826 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 VITQ6UXI7 678 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 NYAP1Q6ZVC0 841 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 SCN4BQ8IWT1 228 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 FAM186BQ8IYM0 893 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 SMYD4Q8IYR2 804 aaPredicted RBP9.69□□□□□ -0.86
NDE1-207ENST00000573203 TRIML1Q8N9V2 468 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 DEPDC1BQ8WUY9 529 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 SMARCE1Q969G3 411 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 E2F7Q96AV8 911 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 FUBP3Q96I24 572 aaKnown RBP eCLIP9.69□□□□□ -0.86
NDE1-207ENST00000573203 GSDMAQ96QA5 445 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 PKMYT1Q99640 499 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 MRPL45Q9BRJ2 306 aaKnown RBP9.69□□□□□ -0.86
NDE1-207ENST00000573203 TRMT61BQ9BVS5 477 aaKnown RBP9.69□□□□□ -0.86
NDE1-207ENST00000573203 XYLT2Q9H1B5 865 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 BRD9Q9H8M2 597 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 TRPV4Q9HBA0 871 aa9.69□□□□□ -0.86
NDE1-207ENST00000573203 MAGEC2Q9UBF1 373 aaPredicted RBP9.69□□□□□ -0.86
NDE1-207ENST00000573203 MAGED2Q9UNF1 606 aaPredicted RBP9.69□□□□□ -0.86
NDE1-207ENST00000573203 TICRRQ7Z2Z1 1910 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 HEPACAM2A8MVW5 462 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 A8MXQ7 604 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 IKBKBO14920 756 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 ZNF263O14978 683 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 AKAP3O75969 853 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 VNN1O95497 513 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 P4HA1P13674 534 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 HMGA1P17096 107 aaKnown RBP9.68□□□□□ -0.86
NDE1-207ENST00000573203 PSMC3P17980 439 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 BDNFP23560 247 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 GDI1P31150 447 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 PSMC2P35998 433 aaKnown RBP9.68□□□□□ -0.86
NDE1-207ENST00000573203 GRIK1P39086 918 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 PIK3CAP42336 1068 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 MAGEA11P43364 429 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 NLRP12P59046 1061 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 STARD6P59095 220 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 CYP27A1Q02318 531 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 TCF15Q12870 199 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 ADAM9Q13443 819 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 ZACNQ401N2 412 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 MDH1BQ5I0G3 518 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 ZNF658Q5TYW1 1059 aaPredicted RBP9.68□□□□□ -0.86
NDE1-207ENST00000573203 SARM1Q6SZW1 724 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 SCARA5Q6ZMJ2 495 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 INTS8Q75QN2 995 aaKnown RBP9.68□□□□□ -0.86
NDE1-207ENST00000573203 GPIHBP1Q8IV16 184 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 ARID3BQ8IVW6 561 aaPredicted RBP9.68□□□□□ -0.86
NDE1-207ENST00000573203 MFSD6LQ8IWD5 586 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 YAF2Q8IY57 180 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 RNF214Q8ND24 703 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 STKLD1Q8NE28 680 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 ERCC4Q92889 916 aaPredicted RBP9.68□□□□□ -0.86
NDE1-207ENST00000573203 IRF7Q92985 503 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 TATDN2Q93075 761 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 MYLPFQ96A32 169 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 TRIM44Q96DX7 344 aaPredicted RBP9.68□□□□□ -0.86
NDE1-207ENST00000573203 GTPBP4Q9BZE4 634 aaKnown RBP9.68□□□□□ -0.86
NDE1-207ENST00000573203 FOXQ1Q9C009 403 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 IRF2BPLQ9H1B7 796 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms