RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 PI4K2AQ9BTU6 479 aa15.87■□□□□ 0.13
NPLOC4-207ENST00000572346 HPS4Q9NQG7 708 aa15.87■□□□□ 0.13
NPLOC4-207ENST00000572346 SDK1Q7Z5N4 2213 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 OTOL1A6NHN0 477 aaPredicted RBP15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 SLC30A4O14863 429 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 EXTL3O43909 919 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 ITGB3P05106 788 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 CSH1P0DML2 217 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 CSH2P0DML3 217 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 DDX6P26196 483 aaKnown RBP eCLIP15.86■□□□□ 0.139e-7■■■□□ 16.7
NPLOC4-207ENST00000572346 POLR2BP30876 1174 aaKnown RBP15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 GPR15P49685 360 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 TFAMQ00059 246 aaKnown RBP15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 TSPY1Q01534 308 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 RUNX3Q13761 415 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 NFKBIBQ15653 356 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 NFE2Q16621 373 aaPredicted RBP15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 BMT2Q1RMZ1 405 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 TMEM196Q5HYL7 178 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 TXNDC8Q6A555 127 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 TRIM68Q6AZZ1 485 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 CAVIN1Q6NZI2 390 aaKnown RBP15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 CEP68Q76N32 757 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 BRSK2Q8IWQ3 736 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 SMYD4Q8IYR2 804 aaPredicted RBP15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 GUF1Q8N442 669 aaKnown RBP15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 PDCL2Q8N4E4 241 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 FAM160A2Q8N612 972 aaPredicted RBP15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 C1orf127Q8N9H9 656 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 RIN3Q8TB24 985 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 NOC3LQ8WTT2 800 aaKnown RBP15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 CHFRQ96EP1 664 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 SAAL1Q96ER3 474 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 CNTNAP3BQ96NU0 1288 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 CNTNAP3Q9BZ76 1288 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 EBF3Q9H4W6 596 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 TDP1Q9NUW8 608 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 MAGED2Q9UNF1 606 aaPredicted RBP15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 AGAP1Q9UPQ3 857 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 SPAG17Q6Q759 2223 aa15.86■□□□□ 0.13
NPLOC4-207ENST00000572346 TULP1O00294 542 aaPredicted RBP15.85■□□□□ 0.13
NPLOC4-207ENST00000572346 TRDMT1O14717 391 aaKnown RBP15.85■□□□□ 0.13
NPLOC4-207ENST00000572346 PPP1R2P41236 205 aa15.85■□□□□ 0.13
NPLOC4-207ENST00000572346 SNRPFP62306 86 aaKnown RBP15.85■□□□□ 0.13
NPLOC4-207ENST00000572346 BFSP1Q12934 665 aa15.85■□□□□ 0.13
NPLOC4-207ENST00000572346 MORC3Q14149 939 aa15.85■□□□□ 0.13
NPLOC4-207ENST00000572346 KLHL40Q2TBA0 621 aa15.85■□□□□ 0.13
NPLOC4-207ENST00000572346 SDHAF4Q5VUM1 108 aa15.85■□□□□ 0.13
NPLOC4-207ENST00000572346 SCARA3Q6AZY7 606 aa15.85■□□□□ 0.13
NPLOC4-207ENST00000572346 FSTL4Q6MZW2 842 aa15.85■□□□□ 0.13
NPLOC4-207ENST00000572346 GOLGA5Q8TBA6 731 aa15.85■□□□□ 0.13
NPLOC4-207ENST00000572346 MRPS31Q92665 395 aaKnown RBP15.85■□□□□ 0.13
NPLOC4-207ENST00000572346 ACBD6Q9BR61 282 aa15.85■□□□□ 0.13
NPLOC4-207ENST00000572346 KIF9Q9HAQ2 790 aa15.85■□□□□ 0.13
NPLOC4-207ENST00000572346 CGNQ9P2M7 1197 aaKnown RBP15.85■□□□□ 0.13
NPLOC4-207ENST00000572346 L1RE1Q9UN81 338 aa15.85■□□□□ 0.13
NPLOC4-207ENST00000572346 GREB1Q4ZG55 1949 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 SOBPA7XYQ1 873 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 CLIC2O15247 247 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 CALUO43852 315 aaPredicted RBP15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 GDF9O60383 454 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 HUS1O60921 280 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 TADA3O75528 432 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 LDHAP00338 332 aaKnown RBP15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 ARSAP15289 507 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 GARTP22102 1010 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 ACAT1P24752 427 aaKnown RBP15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 CYP2F1P24903 491 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 HOXD13P35453 343 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 PRCPP42785 496 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 GRSF1Q12849 480 aaKnown RBP eCLIP15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 DDR2Q16832 855 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 INTS6LQ5JSJ4 861 aaKnown RBP15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 SASS6Q6UVJ0 657 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 MON1AQ86VX9 555 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 CXorf38Q8TB03 319 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 CACTINQ8WUQ7 758 aaKnown RBP15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 FAM84AQ96KN4 292 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 PKMYT1Q99640 499 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 TSG101Q99816 390 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 PCIF1Q9H4Z3 704 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 DDX43Q9NXZ2 648 aaKnown RBP15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 RBAKQ9NYW8 714 aaPredicted RBP15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 TMEM63CQ9P1W3 806 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 CACNA1BQ00975 2339 aa15.84■□□□□ 0.13
NPLOC4-207ENST00000572346 ACACBO00763 2458 aa15.83■□□□□ 0.12
NPLOC4-207ENST00000572346 GOLGA8IPA6NC78 632 aa15.83■□□□□ 0.12
NPLOC4-207ENST00000572346 GOLGA8JA6NMD2 632 aa15.83■□□□□ 0.12
NPLOC4-207ENST00000572346 PDXKO00764 312 aa15.83■□□□□ 0.12
NPLOC4-207ENST00000572346 PSMA7O14818 248 aa15.83■□□□□ 0.12
NPLOC4-207ENST00000572346 ADRB1P08588 477 aa15.83■□□□□ 0.12
NPLOC4-207ENST00000572346 PXNP49023 591 aaPredicted RBP15.83■□□□□ 0.12
NPLOC4-207ENST00000572346 RPL10AP62906 217 aaKnown RBP15.83■□□□□ 0.12
NPLOC4-207ENST00000572346 MYL7Q01449 175 aa15.83■□□□□ 0.12
NPLOC4-207ENST00000572346 ZNF268Q14587 947 aaPredicted RBP15.83■□□□□ 0.12
NPLOC4-207ENST00000572346 CCDC142Q17RM4 750 aa15.83■□□□□ 0.12
NPLOC4-207ENST00000572346 KLHL10Q6JEL2 608 aa15.83■□□□□ 0.12
NPLOC4-207ENST00000572346 CC2D1AQ6P1N0 951 aaPredicted RBP15.83■□□□□ 0.12
NPLOC4-207ENST00000572346 TMEM86AQ8N2M4 240 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms