RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-213	ENST00000571643	AMPD3	Q01432	767 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	LONRF3	Q496Y0	759 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	AKNAD1	Q5T1N1	836 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	ZKSCAN2	Q63HK3	967 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	ARHGEF25	Q86VW2	580 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	TMTC2	Q8N394	836 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	PDPR	Q8NCN5	879 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	C3orf20	Q8ND61	904 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	SLC17A8	Q8NDX2	589 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	TMIE	Q8NEW7	156 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	DDX17	Q92841	729 aa	Known RBP	4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	KAT5	Q92993	513 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	SARAF	Q96BY9	339 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	FAM167A	Q96KS9	214 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	TRIB1	Q96RU8	372 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	ALG8	Q9BVK2	526 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	KMT5A	Q9NQR1	393 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	PCDHB1	Q9Y5F3	818 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	EVC2	Q86UK5	1308 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	SALL3	Q9BXA9	1300 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	SBNO1	A3KN83	1393 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	ROCK2	O75116	1388 aa	Known RBP	4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	COL22A1	Q8NFW1	1626 aa	Predicted RBP	4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	TRIAP1	O43715	76 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	SNUPN	O95149	360 aa	Known RBP	4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	VCAM1	P19320	739 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	GPD1	P21695	349 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	MCC	P23508	829 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	NPTX2	P47972	431 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	MAPK10	P53779	464 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	FAM153C	Q494X1	144 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	CD300E	Q496F6	205 aa	Predicted RBP	4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	FLYWCH1	Q4VC44	716 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	KHDC1	Q4VXA5	237 aa	Known RBP	4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	COLEC12	Q5KU26	742 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	TMEM240	Q5SV17	173 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	TEDDM1	Q5T9Z0	273 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	PEG10	Q86TG7	708 aa	Known RBP	4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	TOR1AIP2	Q8NFQ8	470 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	PBK	Q96KB5	322 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	OSBPL9	Q96SU4	736 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	KLK15	Q9H2R5	256 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	CHPF2	Q9P2E5	772 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	ZDHHC8	Q9ULC8	765 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	POLR3A	O14802	1390 aa	Predicted RBP	4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	ARHGEF10	O15013	1369 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	PLEKHH1	Q9ULM0	1364 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	NINL	Q9Y2I6	1382 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643	PXDN	Q92626	1479 aa		4.37	□□□□□ -1.71
CDC27-213	ENST00000571643		A0A0B4J269	797 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	F2RL2	O00254	374 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	POLRMT	O00411	1230 aa	Known RBP	4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	MGST3	O14880	152 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	URI1	O94763	535 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	GNAI2	P04899	355 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	RARB	P10826	455 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	ZNF37A	P17032	561 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	LMO1	P25800	156 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	PIK3CG	P48736	1102 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	PTH2R	P49190	550 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	TUBB3	Q13509	450 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	KIAA1614	Q5VZ46	1190 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	TMPRSS9	Q7Z410	1059 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	NME8	Q8N427	588 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	SLC30A5	Q8TAD4	765 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	MYCBPAP	Q8TBZ2	947 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	POC1B	Q8TC44	478 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	ZNF384	Q8TF68	577 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	RGMA	Q96B86	450 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	DMRTA2	Q96SC8	542 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	VRK1	Q99986	396 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	CDK19	Q9BWU1	502 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	WDR26	Q9H7D7	661 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	GPR35	Q9HC97	309 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	KLC4	Q9NSK0	619 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	ARPP21	Q9UBL0	812 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	COL4A3BP	Q9Y5P4	624 aa		4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	MED1	Q15648	1581 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC27-213	ENST00000571643	QRICH2	Q9H0J4	1663 aa		4.35	□□□□□ -1.71
CDC27-213	ENST00000571643	RGPD8	O14715	1765 aa	Predicted RBP	4.35	□□□□□ -1.71
CDC27-213	ENST00000571643	ZNF785	A8K8V0	405 aa		4.35	□□□□□ -1.71
CDC27-213	ENST00000571643	NT5C1B-RDH14	C9J2C7	533 aa		4.35	□□□□□ -1.71
CDC27-213	ENST00000571643	SH3BP5	O60239	455 aa		4.35	□□□□□ -1.71
CDC27-213	ENST00000571643	NXPH3	O95157	252 aa		4.35	□□□□□ -1.71
CDC27-213	ENST00000571643	GJB1	P08034	283 aa		4.35	□□□□□ -1.71
CDC27-213	ENST00000571643	PPP3CB	P16298	524 aa		4.35	□□□□□ -1.71
CDC27-213	ENST00000571643	ITGAL	P20701	1170 aa		4.35	□□□□□ -1.71
CDC27-213	ENST00000571643	GATA3	P23771	443 aa		4.35	□□□□□ -1.71
CDC27-213	ENST00000571643	NDUFV1	P49821	464 aa		4.35	□□□□□ -1.71
CDC27-213	ENST00000571643	TXNRD1	Q16881	649 aa		4.35	□□□□□ -1.71
CDC27-213	ENST00000571643	PLAC9	Q5JTB6	97 aa		4.35	□□□□□ -1.71
CDC27-213	ENST00000571643	ZNF772	Q68DY9	489 aa	Predicted RBP	4.35	□□□□□ -1.71
CDC27-213	ENST00000571643	KRT28	Q7Z3Y7	464 aa		4.35	□□□□□ -1.71
CDC27-213	ENST00000571643	TFAP2B	Q92481	460 aa		4.35	□□□□□ -1.71
CDC27-213	ENST00000571643	LPIN2	Q92539	896 aa		4.35	□□□□□ -1.71
CDC27-213	ENST00000571643	SERPINB13	Q9UIV8	391 aa		4.35	□□□□□ -1.71

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