RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 PBX3P40426 434 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 MAGEA11P43364 429 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 RPL34P49207 117 aaKnown RBP12.6□□□□□ -0.39
CDRT1-206ENST00000571263 PDE4CQ08493 712 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 PTPN14Q15678 1187 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 RTP2Q5QGT7 225 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 C9orf50Q5SZB4 431 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 MON1BQ7L1V2 547 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 TMEM173Q86WV6 379 aaPredicted RBP12.6□□□□□ -0.39
CDRT1-206ENST00000571263 PASD1Q8IV76 773 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 VPS52Q8N1B4 723 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 WDTC1Q8N5D0 677 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 FBXO22Q8NEZ5 403 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 OR10T2Q8NGX3 314 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 RFFLQ8WZ73 363 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 SECISBP2LQ93073 1101 aaKnown RBP12.6□□□□□ -0.39
CDRT1-206ENST00000571263 ZNF653Q96CK0 615 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 SLC4A5Q9BY07 1137 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 CSNK1G1Q9HCP0 422 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 DMAP1Q9NPF5 467 aaPredicted RBP12.6□□□□□ -0.39
CDRT1-206ENST00000571263 LZTFL1Q9NQ48 299 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 COMMD8Q9NX08 183 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 CNOT8Q9UFF9 292 aaKnown RBP12.6□□□□□ -0.39
CDRT1-206ENST00000571263 TRIM66O15016 1216 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 SART1O43290 800 aaKnown RBP12.59□□□□□ -0.39
CDRT1-206ENST00000571263 AP1G2O75843 785 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 MTA2O94776 668 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 CYP1A2P05177 515 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 LINC00271P0C7V0 271 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 CTSAP10619 480 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 CCDC130P13994 396 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 CPB1P15086 417 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 DESP17661 470 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 ABCB4P21439 1286 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 CTNNB1P35222 781 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 ARHGAP25P42331 645 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 TUFMP49411 452 aaKnown RBP12.59□□□□□ -0.39
CDRT1-206ENST00000571263 NAP1L1P55209 391 aaKnown RBP12.59□□□□□ -0.39
CDRT1-206ENST00000571263 PDCLQ13371 301 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 SLC39A12Q504Y0 691 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 PAQR9Q6ZVX9 377 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 TAS1R1Q7RTX1 841 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 FAM35AQ86V20 835 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 TTC30AQ86WT1 665 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 PALB2Q86YC2 1186 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 SYCE1Q8N0S2 351 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 KLHL23Q8NBE8 558 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 TRIM58Q8NG06 486 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 ZNF461Q8TAF7 563 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 UBA3Q8TBC4 463 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 BCL7CQ8WUZ0 217 aaPredicted RBP12.59□□□□□ -0.39
CDRT1-206ENST00000571263 MYLPFQ96A32 169 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 ALS2CR12Q96Q35 445 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 TGS1Q96RS0 853 aaKnown RBP12.59□□□□□ -0.39
CDRT1-206ENST00000571263 EMILIN2Q9BXX0 1053 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 LRRC4Q9HBW1 653 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 RXFP1Q9HBX9 757 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 NGRNQ9NPE2 291 aaKnown RBP12.59□□□□□ -0.39
CDRT1-206ENST00000571263 ST7Q9NRC1 585 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 TMEM51Q9NW97 253 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 TAS2R14Q9NYV8 317 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 EHD2Q9NZN4 543 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 GUCA1BQ9UMX6 200 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 IRAK3Q9Y616 596 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 BRCA2P51587 3418 aa12.59□□□□□ -0.39
CDRT1-206ENST00000571263 PTPRSQ13332 1948 aa12.58□□□□□ -0.39
CDRT1-206ENST00000571263 H0YGN5 161 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 HCRTO43612 131 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 FBXO21O94952 628 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 CALCAP01258 141 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 CFHP08603 1231 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 NOP2P46087 812 aaKnown RBP12.58□□□□□ -0.4
CDRT1-206ENST00000571263 NDUFV1P49821 464 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 ERVK-21P61565 698 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 RPL10AP62906 217 aaKnown RBP12.58□□□□□ -0.4
CDRT1-206ENST00000571263 RAB33AQ14088 237 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 EFHC1Q5JVL4 640 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 PLEKHA7Q6IQ23 1121 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 CLEC20AQ6ZU45 233 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 RTL10Q7L3V2 364 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 LRRTM3Q86VH5 581 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 SCML4Q8N228 414 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 C3orf20Q8ND61 904 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 C8orf48Q96LL4 319 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 NCAPGQ9BPX3 1015 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 C11orf70Q9BRQ4 267 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 TRIM62Q9BVG3 475 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 LACRTQ9GZZ8 138 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 LMAN2LQ9H0V9 348 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 THAP2Q9H0W7 228 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 ZBP1Q9H171 429 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 CTTNBP2NLQ9P2B4 639 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 AFF4Q9UHB7 1163 aaKnown RBP12.58□□□□□ -0.4
CDRT1-206ENST00000571263 CDY1Q9Y6F8 540 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 NCANO14594 1321 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 TSC2P49815 1807 aa12.58□□□□□ -0.4
CDRT1-206ENST00000571263 SIGLEC16A6NMB1 481 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 LILRB3O75022 631 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 ABLIM3O94929 683 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 CXCL14O95715 111 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms