RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 RIPK1Q13546 671 aa16.03■□□□□ 0.16
USP43-202ENST00000570475 PIGHQ14442 188 aaPredicted RBP16.03■□□□□ 0.16
USP43-202ENST00000570475 DSTYKQ6XUX3 929 aa16.03■□□□□ 0.16
USP43-202ENST00000570475 STK32AQ8WU08 396 aa16.03■□□□□ 0.16
USP43-202ENST00000570475 L3MBTL3Q96JM7 780 aaPredicted RBP16.03■□□□□ 0.16
USP43-202ENST00000570475 NIF3L1Q9GZT8 377 aa16.03■□□□□ 0.16
USP43-202ENST00000570475 STARD13Q9Y3M8 1113 aa16.03■□□□□ 0.16
USP43-202ENST00000570475 ATP8B3O60423 1300 aa16.03■□□□□ 0.16
USP43-202ENST00000570475 LGR5O75473 907 aa16.03■□□□□ 0.16
USP43-202ENST00000570475 OATP04181 439 aa16.03■□□□□ 0.16
USP43-202ENST00000570475 CYP1A1P04798 512 aaPredicted RBP16.03■□□□□ 0.16
USP43-202ENST00000570475 PDGFRAP16234 1089 aa16.03■□□□□ 0.16
USP43-202ENST00000570475 CCNHP51946 323 aaPredicted RBP16.03■□□□□ 0.16
USP43-202ENST00000570475 TNFAIP1Q13829 316 aa16.03■□□□□ 0.16
USP43-202ENST00000570475 C15orf59Q2T9L4 293 aaPredicted RBP16.03■□□□□ 0.16
USP43-202ENST00000570475 SAMD3Q8N6K7 520 aa16.03■□□□□ 0.16
USP43-202ENST00000570475 PRR11Q96HE9 360 aaPredicted RBP16.03■□□□□ 0.16
USP43-202ENST00000570475 NVLO15381 856 aaKnown RBP16.02■□□□□ 0.16
USP43-202ENST00000570475 KRT7P08729 469 aa16.02■□□□□ 0.16
USP43-202ENST00000570475 ZCCHC18P0CG32 403 aa16.02■□□□□ 0.16
USP43-202ENST00000570475 MMP8P22894 467 aa16.02■□□□□ 0.16
USP43-202ENST00000570475 KLF1Q13351 362 aaPredicted RBP16.02■□□□□ 0.16
USP43-202ENST00000570475 KHDC1Q4VXA5 237 aaKnown RBP16.02■□□□□ 0.16
USP43-202ENST00000570475 PLEKHA7Q6IQ23 1121 aa16.02■□□□□ 0.16
USP43-202ENST00000570475 SMC1BQ8NDV3 1235 aa16.02■□□□□ 0.16
USP43-202ENST00000570475 FLAD1Q8NFF5 587 aa16.02■□□□□ 0.16
USP43-202ENST00000570475 CGRRF1Q99675 332 aa16.02■□□□□ 0.16
USP43-202ENST00000570475 SENP1Q9P0U3 644 aa16.02■□□□□ 0.16
USP43-202ENST00000570475 CCDC22O60826 627 aa16.02■□□□□ 0.16
USP43-202ENST00000570475 ZC3H11AO75152 810 aaKnown RBP eCLIP16.02■□□□□ 0.16
USP43-202ENST00000570475 PRKCBP05771 671 aa16.02■□□□□ 0.16
USP43-202ENST00000570475 KLRC2P26717 231 aa16.02■□□□□ 0.16
USP43-202ENST00000570475 EN1Q05925 392 aaPredicted RBP16.02■□□□□ 0.16
USP43-202ENST00000570475 SH3PXD2AQ5TCZ1 1133 aa16.02■□□□□ 0.16
USP43-202ENST00000570475 STYK1Q6J9G0 422 aa16.02■□□□□ 0.16
USP43-202ENST00000570475 ALYREFQ86V81 257 aaKnown RBP16.02■□□□□ 0.16
USP43-202ENST00000570475 NUDCD3Q8IVD9 361 aa16.02■□□□□ 0.16
USP43-202ENST00000570475 RIBC1Q8N443 379 aaPredicted RBP16.02■□□□□ 0.16
USP43-202ENST00000570475 APOL6Q9BWW8 343 aa16.02■□□□□ 0.16
USP43-202ENST00000570475 EBF2Q9HAK2 575 aa16.02■□□□□ 0.16
USP43-202ENST00000570475 FAM49BQ9NUQ9 324 aa16.02■□□□□ 0.16
USP43-202ENST00000570475 TXNDC16Q9P2K2 825 aa16.02■□□□□ 0.16
USP43-202ENST00000570475 STOML1Q9UBI4 398 aa16.02■□□□□ 0.16
USP43-202ENST00000570475 ZC3H7BQ9UGR2 993 aaKnown RBP16.02■□□□□ 0.16
USP43-202ENST00000570475 NR2E3Q9Y5X4 410 aa16.02■□□□□ 0.16
USP43-202ENST00000570475 ADAMTSL1Q8N6G6 1762 aa16.02■□□□□ 0.15
USP43-202ENST00000570475 SUPT20HL2P0C7V6 817 aa16.02■□□□□ 0.15
USP43-202ENST00000570475 YARSP54577 528 aaKnown RBP16.02■□□□□ 0.15
USP43-202ENST00000570475 TTLL12Q14166 644 aaPredicted RBP16.02■□□□□ 0.15
USP43-202ENST00000570475 SUPT20HL1Q3ZLR7 823 aa16.02■□□□□ 0.15
USP43-202ENST00000570475 GALNTL6Q49A17 601 aa16.02■□□□□ 0.15
USP43-202ENST00000570475 CFAP157Q5JU67 520 aa16.02■□□□□ 0.15
USP43-202ENST00000570475 MAGEC3Q8TD91 643 aa16.02■□□□□ 0.15
USP43-202ENST00000570475 C7orf43Q8WVR3 580 aa16.02■□□□□ 0.15
USP43-202ENST00000570475 DDX50Q9BQ39 737 aaKnown RBP16.02■□□□□ 0.15
USP43-202ENST00000570475 CEP41Q9BYV8 373 aa16.02■□□□□ 0.15
USP43-202ENST00000570475 ACAD9Q9H845 621 aa16.02■□□□□ 0.15
USP43-202ENST00000570475 PCDH9Q9HC56 1237 aa16.02■□□□□ 0.15
USP43-202ENST00000570475 ZNRF3Q9ULT6 936 aa16.02■□□□□ 0.15
USP43-202ENST00000570475 PCNTO95613 3336 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 LOC100653049A0A140TA62 436 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 CCDC78A2IDD5 438 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 KRT34O76011 436 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 CXCL8P10145 99 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 CHI3L2Q15782 390 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 SULF1Q8IWU6 871 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 CPT1BQ92523 772 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 PTPRN2Q92932 1015 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 UTP4Q969X6 686 aaKnown RBP16.01■□□□□ 0.15
USP43-202ENST00000570475 CDHR1Q96JP9 859 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 CLPTM1LQ96KA5 538 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 STRCQ7RTU9 1775 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.01■□□□□ 0.15
USP43-202ENST00000570475 CYB561D2O14569 222 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 ZWINTO95229 277 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 DPEP1P16444 411 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 PTPN4P29074 926 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 BCAR1P56945 870 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 GPX6P59796 221 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 CLNKQ7Z7G1 428 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 SESTD1Q86VW0 696 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 FBXO41Q8TF61 875 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 PPP1R13LQ8WUF5 828 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 NSL1Q96IY1 281 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 C17orf75Q9HAS0 396 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 DDX56Q9NY93 547 aaKnown RBP16.01■□□□□ 0.15
USP43-202ENST00000570475 CYP39A1Q9NYL5 469 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 LGALS13Q9UHV8 139 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.01■□□□□ 0.15
USP43-202ENST00000570475 EME2A4GXA9 379 aaPredicted RBP16.01■□□□□ 0.15
USP43-202ENST00000570475 MEI4A8MW99 385 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 ALOX15BO15296 676 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 TMEM63AO94886 807 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 LYPLA2O95372 231 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 NCF2P19878 526 aaPredicted RBP16.01■□□□□ 0.15
USP43-202ENST00000570475 IL1R2P27930 398 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 MIPP30301 263 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 CLCN3P51790 818 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 PDE1BQ01064 536 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 SP2Q02086 613 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms