RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 LRRC55Q6ZSA7 311 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 MOGAT3Q86VF5 341 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 SLC25A32Q9H2D1 315 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 ZSCAN32Q9NX65 697 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 EIF2B4Q9UI10 523 aaKnown RBP6.73□□□□□ -1.33
UBR1-208ENST00000569066 CAPN11Q9UMQ6 739 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 SHOC2Q9UQ13 582 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 MAP3K2Q9Y2U5 619 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 LRRFIP2Q9Y608 721 aaKnown RBP6.73□□□□□ -1.33
UBR1-208ENST00000569066 RGS10O43665 173 aa6.72□□□□□ -1.33
UBR1-208ENST00000569066 DGKEP52429 567 aa6.72□□□□□ -1.33
UBR1-208ENST00000569066 LOXL3P58215 753 aa6.72□□□□□ -1.33
UBR1-208ENST00000569066 SURF1Q15526 300 aa6.72□□□□□ -1.33
UBR1-208ENST00000569066 INSCQ1MX18 579 aa6.72□□□□□ -1.33
UBR1-208ENST00000569066 SLC5A9Q2M3M2 681 aa6.72□□□□□ -1.33
UBR1-208ENST00000569066 METTL24Q5JXM2 366 aa6.72□□□□□ -1.33
UBR1-208ENST00000569066 LAYNQ6UX15 382 aa6.72□□□□□ -1.33
UBR1-208ENST00000569066 ANKRD18AQ8IVF6 992 aa6.72□□□□□ -1.33
UBR1-208ENST00000569066 MAPKAPK5Q8IW41 473 aa6.72□□□□□ -1.33
UBR1-208ENST00000569066 GSPT2Q8IYD1 628 aaKnown RBP6.72□□□□□ -1.33
UBR1-208ENST00000569066 CPT1CQ8TCG5 803 aa6.72□□□□□ -1.33
UBR1-208ENST00000569066 TMEM125Q96AQ2 219 aa6.72□□□□□ -1.33
UBR1-208ENST00000569066 FSCN3Q9NQT6 498 aa6.72□□□□□ -1.33
UBR1-208ENST00000569066 ADM5C9JUS6 153 aa6.71□□□□□ -1.33
UBR1-208ENST00000569066 EYA2O00167 538 aa6.71□□□□□ -1.33
UBR1-208ENST00000569066 POLBP06746 335 aa6.71□□□□□ -1.33
UBR1-208ENST00000569066 C8AP07357 584 aa6.71□□□□□ -1.33
UBR1-208ENST00000569066 KCNA2P16389 499 aa6.71□□□□□ -1.33
UBR1-208ENST00000569066 B3GNTL1Q67FW5 361 aaPredicted RBP6.71□□□□□ -1.33
UBR1-208ENST00000569066 SPOCD1Q6ZMY3 1216 aa6.71□□□□□ -1.33
UBR1-208ENST00000569066 Q6ZSN1 163 aa6.71□□□□□ -1.33
UBR1-208ENST00000569066 ASB12Q8WXK4 309 aa6.71□□□□□ -1.33
UBR1-208ENST00000569066 SSBP3Q9BWW4 388 aaPredicted RBP6.71□□□□□ -1.33
UBR1-208ENST00000569066 DHX36Q9H2U1 1008 aaKnown RBP6.71□□□□□ -1.33
UBR1-208ENST00000569066 RNPEPQ9H4A4 650 aa6.71□□□□□ -1.33
UBR1-208ENST00000569066 ZNF768Q9H5H4 540 aaKnown RBP6.71□□□□□ -1.33
UBR1-208ENST00000569066 TRPM5Q9NZQ8 1165 aa6.71□□□□□ -1.33
UBR1-208ENST00000569066 SERTAD3Q9UJW9 196 aa6.71□□□□□ -1.33
UBR1-208ENST00000569066 NDRG4Q9ULP0 352 aaKnown RBP6.71□□□□□ -1.33
UBR1-208ENST00000569066 SORCS3Q9UPU3 1222 aa6.71□□□□□ -1.33
UBR1-208ENST00000569066 MTO1Q9Y2Z2 717 aaKnown RBP6.71□□□□□ -1.33
UBR1-208ENST00000569066 AHRRA9YTQ3 701 aa6.71□□□□□ -1.34
UBR1-208ENST00000569066 ERN1O75460 977 aaKnown RBP6.71□□□□□ -1.34
UBR1-208ENST00000569066 INMTO95050 263 aa6.71□□□□□ -1.34
UBR1-208ENST00000569066 VNN1O95497 513 aa6.71□□□□□ -1.34
UBR1-208ENST00000569066 XRCC6P12956 609 aaKnown RBP eCLIP6.71□□□□□ -1.34
UBR1-208ENST00000569066 NPPBP16860 134 aa6.71□□□□□ -1.34
UBR1-208ENST00000569066 BTBD16Q32M84 506 aa6.71□□□□□ -1.34
UBR1-208ENST00000569066 RBM20Q5T481 1227 aaKnown RBP6.71□□□□□ -1.34
UBR1-208ENST00000569066 MRNIPQ6NTE8 343 aa6.71□□□□□ -1.34
UBR1-208ENST00000569066 KLHL17Q6TDP4 642 aa6.71□□□□□ -1.34
UBR1-208ENST00000569066 RFX8Q6ZV50 586 aa6.71□□□□□ -1.34
UBR1-208ENST00000569066 GATAD2AQ86YP4 633 aa6.71□□□□□ -1.34
UBR1-208ENST00000569066 OTUD7AQ8TE49 926 aaPredicted RBP6.71□□□□□ -1.34
UBR1-208ENST00000569066 RUBCNQ92622 972 aa6.71□□□□□ -1.34
UBR1-208ENST00000569066 ZSCAN31Q96LW9 406 aaPredicted RBP6.71□□□□□ -1.34
UBR1-208ENST00000569066 WWC2-AS2Q96NR7 200 aa6.71□□□□□ -1.34
UBR1-208ENST00000569066 PABPC3Q9H361 631 aaKnown RBP6.71□□□□□ -1.34
UBR1-208ENST00000569066 RGS17Q9UGC6 210 aaPredicted RBP6.71□□□□□ -1.34
UBR1-208ENST00000569066 CLCA2Q9UQC9 943 aa6.71□□□□□ -1.34
UBR1-208ENST00000569066 SSX2IPQ9Y2D8 614 aa6.71□□□□□ -1.34
UBR1-208ENST00000569066 COQ9O75208 318 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 CENPBP07199 599 aaPredicted RBP6.7□□□□□ -1.34
UBR1-208ENST00000569066 ITGALP20701 1170 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 ACO1P21399 889 aaKnown RBP6.7□□□□□ -1.34
UBR1-208ENST00000569066 GPS1Q13098 491 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 CUL4BQ13620 913 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 FHL3Q13643 280 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 GRM4Q14833 912 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 JAKMIP3Q5VZ66 844 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 ABLIM2Q6H8Q1 611 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 TANGO2Q6ICL3 276 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 POLNQ7Z5Q5 900 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 ADGRG5Q8IZF4 528 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 CSGALNACT1Q8TDX6 532 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 MOGAT1Q96PD6 335 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 MED15Q96RN5 788 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 REXO4Q9GZR2 422 aaKnown RBP6.7□□□□□ -1.34
UBR1-208ENST00000569066 DTNAQ9Y4J8 743 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 RPS6KA4O75676 772 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 SCAF4O95104 1147 aaKnown RBP6.7□□□□□ -1.34
UBR1-208ENST00000569066 PLATP00750 562 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 ITGA2BP08514 1039 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 SRGAP2BP0DMP2 458 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 IDEP14735 1019 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 COMTP21964 271 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 AKT1P31749 480 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 NDUFV1P49821 464 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 SIM2Q14190 667 aaPredicted RBP6.7□□□□□ -1.34
UBR1-208ENST00000569066 GEN1Q17RS7 908 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 PREPLQ4J6C6 727 aaPredicted RBP6.7□□□□□ -1.34
UBR1-208ENST00000569066 HTR3DQ70Z44 454 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 RRAGAQ7L523 313 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 CIR1Q86X95 450 aaPredicted RBP6.7□□□□□ -1.34
UBR1-208ENST00000569066 NACC2Q96BF6 587 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 KCNC2Q96PR1 638 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 GPR20Q99678 358 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 XYLT2Q9H1B5 865 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 PRDM8Q9NQV8 689 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 FEM1BQ9UK73 627 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms