RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	PALM2	Q8IXS6	379 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	GPC2	Q8N158	579 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	NAT8L	Q8N9F0	302 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	ACSF2	Q96CM8	615 aa	Predicted RBP	13.29	□□□□□ -0.28
PKM-222	ENST00000568883	TMEM176A	Q96HP8	235 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.29	□□□□□ -0.28
PKM-222	ENST00000568883	CDT1	Q9H211	546 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	ACSS3	Q9H6R3	686 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	METTL5	Q9NRN9	209 aa	Known RBP	13.29	□□□□□ -0.28
PKM-222	ENST00000568883	KIAA1257	Q9ULG3	409 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	PHTF1	Q9UMS5	762 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	ZBTB42	B2RXF5	422 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883		E7ESA3	106 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	TM9SF1	O15321	606 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	SPAG7	O75391	227 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	CCNB1	P14635	433 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	FOXN2	P32314	431 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	YARS	P54577	528 aa	Known RBP	13.28	□□□□□ -0.28
PKM-222	ENST00000568883	EIF3E	P60228	445 aa	Known RBP	13.28	□□□□□ -0.28
PKM-222	ENST00000568883	RNASEL	Q05823	741 aa	Known RBP	13.28	□□□□□ -0.28
PKM-222	ENST00000568883	MBTD1	Q05BQ5	628 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	ADCY1	Q08828	1119 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	PRKG1	Q13976	671 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	FASTKD3	Q14CZ7	662 aa	Known RBP	13.28	□□□□□ -0.28
PKM-222	ENST00000568883	STIL	Q15468	1287 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	FAM187B	Q17R55	369 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	ZNF484	Q5JVG2	852 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	EEPD1	Q7L9B9	569 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	MAP7D3	Q8IWC1	876 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	FITM2	Q8N6M3	262 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	CMAS	Q8NFW8	434 aa	Predicted RBP	13.28	□□□□□ -0.28
PKM-222	ENST00000568883	GIMAP7	Q8NHV1	300 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	JOSD2	Q8TAC2	188 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	CPT1B	Q92523	772 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	MCRS1	Q96EZ8	462 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	NCAPG	Q9BPX3	1015 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	ADPGK	Q9BRR6	497 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	ARHGEF3	Q9NR81	526 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	POLI	Q9UNA4	740 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	AGAP1	Q9UPQ3	857 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	DOCK5	Q9H7D0	1870 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883		A0A0G2JMZ2	1700 aa		13.28	□□□□□ -0.28
PKM-222	ENST00000568883	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.27	□□□□□ -0.28
PKM-222	ENST00000568883	FOXO6	A8MYZ6	492 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883		M0QYV0	167 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.27	□□□□□ -0.28	1e-6	■■■■■ 36.1
PKM-222	ENST00000568883	IRF6	O14896	467 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883	CILP	O75339	1184 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883	CXCL8	P10145	99 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883	MSH2	P43246	934 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883	IREB2	P48200	963 aa	Known RBP	13.27	□□□□□ -0.28
PKM-222	ENST00000568883	RASSF2	P50749	326 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883	SNX16	P57768	344 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883	OSTN	P61366	133 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883	ROR1	Q01973	937 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883	PDE4C	Q08493	712 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883	SMTNL2	Q2TAL5	461 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883	HSDL1	Q3SXM5	330 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883	EFCAB12	Q6NXP0	572 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883	ADGRD1	Q6QNK2	874 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883	ZNF398	Q8TD17	642 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883	CPXM1	Q96SM3	734 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883	CYTH2	Q99418	400 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883	RABGEF1	Q9UJ41	708 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.27	□□□□□ -0.28
PKM-222	ENST00000568883	USP18	Q9UMW8	372 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.27	□□□□□ -0.28
PKM-222	ENST00000568883	IKBKG	Q9Y6K9	419 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883	LCT	P09848	1927 aa		13.27	□□□□□ -0.28
PKM-222	ENST00000568883		A0A0G2JLL6	359 aa	Predicted RBP	13.27	□□□□□ -0.29
PKM-222	ENST00000568883	IQANK1	A0A1B0GTG1	560 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	CXCL11	O14625	94 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	TYROBP	O43914	113 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	EDF1	O60869	148 aa	Known RBP	13.27	□□□□□ -0.29
PKM-222	ENST00000568883	MICAL2	O94851	1124 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	UNC5C	O95185	931 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	TRUB2	O95900	331 aa	Known RBP	13.27	□□□□□ -0.29
PKM-222	ENST00000568883	ERBB2	P04626	1255 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	TROVE2	P10155	538 aa	Known RBP eCLIP	13.27	□□□□□ -0.29	4e-7	■□□□□ 8.9
PKM-222	ENST00000568883	MIP	P30301	263 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	RPL22	P35268	128 aa	Known RBP	13.27	□□□□□ -0.29
PKM-222	ENST00000568883	ZNF143	P52747	638 aa	Predicted RBP	13.27	□□□□□ -0.29
PKM-222	ENST00000568883	ATP11A	P98196	1134 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	DNAJC3	Q13217	504 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	TTLL4	Q14679	1199 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	CGB2	Q6NT52	195 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	CAPN12	Q6ZSI9	719 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	C3orf62	Q6ZUJ4	267 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	FAM47E	Q6ZV65	393 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.27	□□□□□ -0.29
PKM-222	ENST00000568883	VSIG1	Q86XK7	387 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	TRIM50	Q86XT4	487 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	NT5DC4	Q86YG4	428 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	ANKMY2	Q8IV38	441 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	C1orf127	Q8N9H9	656 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	SLC4A11	Q8NBS3	891 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	LRRC37B	Q96QE4	947 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	CNPY3	Q9BT09	278 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	ERAP1	Q9NZ08	941 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	XPO7	Q9UIA9	1087 aa	Known RBP	13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms