RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 ACBD6Q9BR61 282 aa12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 ZHX3Q9H4I2 956 aa12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 DDX43Q9NXZ2 648 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 GCNT4Q9P109 453 aa12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 AGO2Q9UKV8 859 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 MSRB2Q9Y3D2 182 aa12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 ASCC3Q8N3C0 2202 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 C2orf78A6NCI8 922 aa12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 TISP43B9A030 160 aa12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 ANKRD63C9JTQ0 380 aa12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 EIF5BO60841 1220 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 HUS1O60921 280 aa12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 TBCAO75347 108 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 IL18RAPO95256 599 aa12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 KRT18P05783 430 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 ENGP17813 658 aa12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 HDCP19113 662 aa12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 OPRD1P41143 372 aa12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 P2RY2P41231 377 aa12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 DPP6P42658 865 aa12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 SIM1P81133 766 aaPredicted RBP12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 MRPS21P82921 87 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 MYL7Q01449 175 aa12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 CFAP221Q4G0U5 840 aa12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 HSF5Q4G112 596 aaPredicted RBP12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 ARL6IP4Q66PJ3 421 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 SPATA2LQ8IUW3 424 aaPredicted RBP12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 TMEM86AQ8N2M4 240 aa12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 CCDC33Q8N5R6 958 aa12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 FUBP3Q96I24 572 aaKnown RBP eCLIP12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 AK8Q96MA6 479 aa12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 LINC00597Q9H2U6 94 aa12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 CIZ1Q9ULV3 898 aaPredicted RBP12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 L1RE1Q9UN81 338 aa12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 STYXL1Q9Y6J8 313 aa12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 SMG1Q96Q15 3661 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-209ENST00000568569 SCN1AP35498 2009 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 UPK3BL1B0FP48 263 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 UPK3BL2E5RIL1 263 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 H0Y626 953 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 MAP3K13O43283 966 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 TRIM16O95361 564 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 PFKLP17858 780 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 ACAT1P24752 427 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 POLR2BP30876 1174 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 RDXP35241 583 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 HOXD12P35452 270 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 PTGER3P43115 390 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 DHX8Q14562 1220 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 GAB4Q2WGN9 574 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 ZC2HC1CQ53FD0 456 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 SPDYCQ5MJ68 293 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 LYSMD4Q5XG99 296 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 SLC23A3Q6PIS1 610 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 TMEM92Q6UXU6 159 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 ARMCX6Q7L4S7 300 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 SCN4BQ8IWT1 228 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 HDDC3Q8N4P3 179 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 KIAA1958Q8N8K9 716 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 SPATA18Q8TC71 538 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 RLN3Q8WXF3 142 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 CALML4Q96GE6 196 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 ZSCAN31Q96LW9 406 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 FNBP1Q96RU3 617 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 PKMYT1Q99640 499 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 POLMQ9NP87 494 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 BCCIPQ9P287 314 aaKnown RBP eCLIP12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 GTF3C4Q9UKN8 822 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 KLK13Q9UKR3 277 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 NUP205Q92621 2012 aa12.66□□□□□ -0.38
GTF3C1-209ENST00000568569 CELSR3Q9NYQ7 3312 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 GON4LQ3T8J9 2241 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 SPAARA0A1B0GVQ0 90 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 MYMKA6NI61 221 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 ITGB3P05106 788 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 HNRNPLP14866 589 aaKnown RBP eCLIP12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 PCSK1P29120 753 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 EIF2DP41214 584 aaKnown RBP12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 UBA7P41226 1012 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 ATXN3P54252 364 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 TFAMQ00059 246 aaKnown RBP12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 SEMA3BQ13214 749 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 BYSLQ13895 437 aaKnown RBP12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 POSTNQ15063 836 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 EOGTQ5NDL2 527 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 MCTP1Q6DN14 999 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 CRELD2Q6UXH1 353 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 PIP4P1Q86T03 277 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 TMEFF1Q8IYR6 380 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 ALLCQ8N6M5 410 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 LRRC52Q8N7C0 313 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 IL17RCQ8NAC3 791 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 TXNDC5Q8NBS9 432 aaKnown RBP12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 POMGNT1Q8WZA1 660 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 ST6GALNAC4Q9H4F1 302 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 TMEM74BQ9NUR3 256 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 PILRBQ9UKJ0 227 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 AGAP1Q9UPQ3 857 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 KIF3AQ9Y496 699 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms