RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 DLGAP2Q9P1A6 1054 aa8.73□□□□□ -1.01
HDGFL3-205ENST00000568129 UXTQ9UBK9 157 aaPredicted RBP8.73□□□□□ -1.01
HDGFL3-205ENST00000568129 NXF1Q9UBU9 619 aaKnown RBP8.73□□□□□ -1.01
HDGFL3-205ENST00000568129 RAPGEFL1Q9UHV5 662 aa8.73□□□□□ -1.01
HDGFL3-205ENST00000568129 HCN4Q9Y3Q4 1203 aa8.73□□□□□ -1.01
HDGFL3-205ENST00000568129 MYO16Q9Y6X6 1858 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 TRIM49BA6NDI0 452 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 A8MXQ7 604 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 TNFRSF10BO14763 440 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 PSMA7O14818 248 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 TRIM66O15016 1216 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 CHADO15335 359 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 LRRN2O75325 713 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 CFHP08603 1231 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 TRIM49P0CI25 452 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 TRIM49CP0CI26 452 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 BDNFP23560 247 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 ANP32AP39687 249 aaKnown RBP8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 PPP3CCP48454 512 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 GCLMP48507 274 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 PSMC1P62191 440 aaKnown RBP8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 TCF15Q12870 199 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 FZD5Q13467 585 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 STIM1Q13586 685 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 MLF2Q15773 248 aaPredicted RBP8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 STXBP5Q5T5C0 1151 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 SNX30Q5VWJ9 437 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 SMYD5Q6GMV2 418 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 MAMSTRQ6ZN01 415 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 MON1AQ86VX9 555 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 CMTM8Q8IZV2 173 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 FUKQ8N0W3 1084 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 SIX5Q8N196 739 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 FBXL13Q8NEE6 735 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 SEMA4DQ92854 862 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 SLC35C1Q96A29 364 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 CLDN23Q96B33 292 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 SHDQ96IW2 340 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 TNIP3Q96KP6 325 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 MED15Q96RN5 788 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 TSG101Q99816 390 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 TRMT61BQ9BVS5 477 aaKnown RBP8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 ELOVL4Q9GZR5 314 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 ATXN3LQ9H3M9 355 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 DPEP3Q9H4B8 488 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 METTL14Q9HCE5 456 aaKnown RBP8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 ARHGEF3Q9NR81 526 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 LMBRD1Q9NUN5 540 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 COMMD8Q9NX08 183 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 GCNT4Q9P109 453 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 MYO18AQ92614 2054 aaKnown RBP8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 ATG2BQ96BY7 2078 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 COL4A3Q01955 1670 aa8.72□□□□□ -1.01
HDGFL3-205ENST00000568129 KANSL1LA0AUZ9 987 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 BICDL2A1A5D9 508 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 HEPACAM2A8MVW5 462 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 P4HA2O15460 535 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 GALR2O43603 387 aaPredicted RBP8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 PI15O43692 258 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 CILPO75339 1184 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 OLFM2O95897 454 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 ZDHHC11BP0C7U3 371 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 VIPR2P41587 438 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 NDST1P52848 882 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 CACNA2D1P54289 1103 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 CBWD6Q4V339 395 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 ARHGAP15Q53QZ3 475 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 MDH1BQ5I0G3 518 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 CBWD3Q5JTY5 395 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 CBWD5Q5RIA9 395 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 GPR158Q5T848 1215 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 SDHAF4Q5VUM1 108 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 SPOPLQ6IQ16 392 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 TRIM59Q8IWR1 403 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 TTC39CQ8N584 583 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 CELF5Q8N6W0 485 aaKnown RBP8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 UBR7Q8N806 425 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 PRSS33Q8NF86 280 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 LMO3Q8TAP4 145 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 FAM200AQ8TCP9 573 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 NELFBQ8WX92 580 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 OVCA2Q8WZ82 227 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 IRF7Q92985 503 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 EEF2KMTQ96G04 330 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 NELL2Q99435 816 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 HNRNPABQ99729 332 aaKnown RBP8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 FAM83CQ9BQN1 747 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 ZNF518BQ9C0D4 1074 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 NIF3L1Q9GZT8 377 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 RAB20Q9NX57 234 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 EHD2Q9NZN4 543 aa8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 ARMCX3Q9UH62 379 aaPredicted RBP8.71□□□□□ -1.02
HDGFL3-205ENST00000568129 KIAA1549LQ6ZVL6 1849 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 HHLA1C9JL84 531 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 F8VP50 259 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 PRAMEF12O95522 483 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 GNA14O95837 355 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 GRIK1P39086 918 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 PLA2G5P39877 138 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 PIK3CAP42336 1068 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms