RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 LEO1Q8WVC0 666 aaPredicted RBP16.63■□□□□ 0.25
PALB2-205ENST00000567003 LARP4BQ92615 738 aaKnown RBP16.63■□□□□ 0.25
PALB2-205ENST00000567003 ATP2A3Q93084 1043 aa16.63■□□□□ 0.25
PALB2-205ENST00000567003 TRMT2BQ96GJ1 504 aaKnown RBP16.63■□□□□ 0.25
PALB2-205ENST00000567003 TMEM206Q9H813 350 aa16.63■□□□□ 0.25
PALB2-205ENST00000567003 PPP4R2Q9NY27 417 aa16.63■□□□□ 0.25
PALB2-205ENST00000567003 GCNT4Q9P109 453 aa16.63■□□□□ 0.25
PALB2-205ENST00000567003 UXTQ9UBK9 157 aaPredicted RBP16.63■□□□□ 0.25
PALB2-205ENST00000567003 ZMIZ1Q9ULJ6 1067 aa16.63■□□□□ 0.25
PALB2-205ENST00000567003 GON4LQ3T8J9 2241 aa16.63■□□□□ 0.25
PALB2-205ENST00000567003 GOLGA8IPA6NC78 632 aa16.62■□□□□ 0.25
PALB2-205ENST00000567003 GOLGA8JA6NMD2 632 aa16.62■□□□□ 0.25
PALB2-205ENST00000567003 SCAMP3O14828 347 aaKnown RBP16.62■□□□□ 0.25
PALB2-205ENST00000567003 EIF5BO60841 1220 aaKnown RBP16.62■□□□□ 0.25
PALB2-205ENST00000567003 HUS1O60921 280 aa16.62■□□□□ 0.25
PALB2-205ENST00000567003 PPP1R37O75864 691 aa16.62■□□□□ 0.25
PALB2-205ENST00000567003 HNRNPLP14866 589 aaKnown RBP eCLIP16.62■□□□□ 0.25
PALB2-205ENST00000567003 OPRD1P41143 372 aa16.62■□□□□ 0.25
PALB2-205ENST00000567003 ZXDBP98169 803 aa16.62■□□□□ 0.25
PALB2-205ENST00000567003 LMBRD2Q68DH5 695 aaPredicted RBP16.62■□□□□ 0.25
PALB2-205ENST00000567003 USP49Q70CQ1 688 aa16.62■□□□□ 0.25
PALB2-205ENST00000567003 ZNF720Q7Z2F6 126 aa16.62■□□□□ 0.25
PALB2-205ENST00000567003 SPATA2LQ8IUW3 424 aaPredicted RBP16.62■□□□□ 0.25
PALB2-205ENST00000567003 BRSK2Q8IWQ3 736 aa16.62■□□□□ 0.25
PALB2-205ENST00000567003 CXorf38Q8TB03 319 aa16.62■□□□□ 0.25
PALB2-205ENST00000567003 USP33Q8TEY7 942 aa16.62■□□□□ 0.25
PALB2-205ENST00000567003 NOC3LQ8WTT2 800 aaKnown RBP16.62■□□□□ 0.25
PALB2-205ENST00000567003 MYRFLQ96LU7 910 aa16.62■□□□□ 0.25
PALB2-205ENST00000567003 ACBD6Q9BR61 282 aa16.62■□□□□ 0.25
PALB2-205ENST00000567003 ST6GALNAC4Q9H4F1 302 aa16.62■□□□□ 0.25
PALB2-205ENST00000567003 ABCB6Q9NP58 842 aa16.62■□□□□ 0.25
PALB2-205ENST00000567003 KIF3AQ9Y496 699 aa16.62■□□□□ 0.25
PALB2-205ENST00000567003 SNX9Q9Y5X1 595 aa16.62■□□□□ 0.25
PALB2-205ENST00000567003 PKD1L2Q7Z442 2459 aa16.62■□□□□ 0.25
PALB2-205ENST00000567003 CACNA1EQ15878 2313 aa16.62■□□□□ 0.25
PALB2-205ENST00000567003 MYOFQ9NZM1 2061 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 SOBPA7XYQ1 873 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 K7EQS6 105 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 ATP2C2O75185 946 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 KRT19P08727 400 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 DDIT3P35638 169 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 PNPLA4P41247 253 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 DHPSP49366 369 aaPredicted RBP16.61■□□□□ 0.25
PALB2-205ENST00000567003 PSMC1P62191 440 aaKnown RBP16.61■□□□□ 0.25
PALB2-205ENST00000567003 MYL7Q01449 175 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 MESP2Q0VG99 397 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 GAB4Q2WGN9 574 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 UAP1L1Q3KQV9 507 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 DAB2IPQ5VWQ8 1189 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 CYP2U1Q7Z449 544 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 ADGRF2Q8IZF7 708 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 CSGALNACT2Q8N6G5 542 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 KRI1Q8N9T8 703 aaKnown RBP16.61■□□□□ 0.25
PALB2-205ENST00000567003 MDGA1Q8NFP4 955 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 EXOC4Q96A65 974 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 FGFBP2Q9BYJ0 223 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 TMEM9BQ9NQ34 198 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 SIX4Q9UIU6 781 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 WASF3Q9UPY6 502 aa16.61■□□□□ 0.25
PALB2-205ENST00000567003 CDX4O14627 284 aaPredicted RBP16.6■□□□□ 0.25
PALB2-205ENST00000567003 KHNYNO15037 678 aaKnown RBP16.6■□□□□ 0.25
PALB2-205ENST00000567003 CD2BP2O95400 341 aaKnown RBP16.6■□□□□ 0.25
PALB2-205ENST00000567003 HOXB3P14651 431 aaPredicted RBP16.6■□□□□ 0.25
PALB2-205ENST00000567003 LONP1P36776 959 aaKnown RBP16.6■□□□□ 0.25
PALB2-205ENST00000567003 CASP5P51878 434 aa16.6■□□□□ 0.25
PALB2-205ENST00000567003 USP46P62068 366 aa16.6■□□□□ 0.25
PALB2-205ENST00000567003 KCNB1Q14721 858 aa16.6■□□□□ 0.25
PALB2-205ENST00000567003 USP39Q53GS9 565 aaKnown RBP16.6■□□□□ 0.25
PALB2-205ENST00000567003 KIAA1211LQ6NV74 962 aa16.6■□□□□ 0.25
PALB2-205ENST00000567003 ARMCX6Q7L4S7 300 aa16.6■□□□□ 0.25
PALB2-205ENST00000567003 NT5DC4Q86YG4 428 aa16.6■□□□□ 0.25
PALB2-205ENST00000567003 DEFB124Q8NES8 71 aa16.6■□□□□ 0.25
PALB2-205ENST00000567003 RLN3Q8WXF3 142 aa16.6■□□□□ 0.25
PALB2-205ENST00000567003 PIGKQ92643 395 aa16.6■□□□□ 0.25
PALB2-205ENST00000567003 MYLPFQ96A32 169 aa16.6■□□□□ 0.25
PALB2-205ENST00000567003 EPSTI1Q96J88 318 aa16.6■□□□□ 0.25
PALB2-205ENST00000567003 TMX3Q96JJ7 454 aa16.6■□□□□ 0.25
PALB2-205ENST00000567003 STRA6Q9BX79 667 aa16.6■□□□□ 0.25
PALB2-205ENST00000567003 TMEM121BQ9BXQ6 578 aaPredicted RBP16.6■□□□□ 0.25
PALB2-205ENST00000567003 MTMR12Q9C0I1 747 aa16.6■□□□□ 0.25
PALB2-205ENST00000567003 MRPL44Q9H9J2 332 aaKnown RBP16.6■□□□□ 0.25
PALB2-205ENST00000567003 ZDHHC4Q9NPG8 344 aa16.6■□□□□ 0.25
PALB2-205ENST00000567003 RBAKQ9NYW8 714 aaPredicted RBP16.6■□□□□ 0.25
PALB2-205ENST00000567003 CIZ1Q9ULV3 898 aaPredicted RBP16.6■□□□□ 0.25
PALB2-205ENST00000567003 DSPP15924 2871 aaKnown RBP16.6■□□□□ 0.25
PALB2-205ENST00000567003 TNRC6BQ9UPQ9 1833 aaKnown RBP16.59■□□□□ 0.25
PALB2-205ENST00000567003 HDCP19113 662 aa16.59■□□□□ 0.25
PALB2-205ENST00000567003 ABCD1P33897 745 aa16.59■□□□□ 0.25
PALB2-205ENST00000567003 IRX4P78413 519 aa16.59■□□□□ 0.25
PALB2-205ENST00000567003 POU5F1Q01860 360 aaKnown RBP16.59■□□□□ 0.25
PALB2-205ENST00000567003 NR1H3Q13133 447 aa16.59■□□□□ 0.25
PALB2-205ENST00000567003 POSTNQ15063 836 aa16.59■□□□□ 0.25
PALB2-205ENST00000567003 SF3A1Q15459 793 aaKnown RBP16.59■□□□□ 0.25
PALB2-205ENST00000567003 SOWAHAQ2M3V2 549 aa16.59■□□□□ 0.25
PALB2-205ENST00000567003 L1TD1Q5T7N2 865 aaKnown RBP16.59■□□□□ 0.25
PALB2-205ENST00000567003 TMEM92Q6UXU6 159 aa16.59■□□□□ 0.25
PALB2-205ENST00000567003 RASSF3Q86WH2 238 aa16.59■□□□□ 0.25
PALB2-205ENST00000567003 TMEM86AQ8N2M4 240 aa16.59■□□□□ 0.25
PALB2-205ENST00000567003 FRMD1Q8N878 549 aa16.59■□□□□ 0.25
PALB2-205ENST00000567003 HVCN1Q96D96 273 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms